From XML to XML: The why and how of making the biodiversity literature accessible to researchers

We present the ABLE document collection, which consists of a set of annotated volumes of the Bulletin of the British Museum (Natural History). These follow our work on automating the markup of scanned copies of the biodiversity literature, for the purpose of supporting working taxonomists. We consider an enhanced TEI XML markup language, which is used as an intermediate stage in translating from the initial XML obtained from Optical Character Recognition to the target taXMLit. The intermediate representation allows additional information from external sources such as a taxonomic thesaurus to be incorporated before the final translation into taXMLit

Semantics-Based Content Extraction in Typewritten Historical Documents

This paper presents a flexible approach to extracting content from scanned historical documents using semantic information. The final electronic document is the result of a "digital historical document lifecycle" process, where the expert knowledge of the historian/archivist user is incorporated at different stages. Results show that such a conversion strategy aided by (expert) user-specified semantic information and which enables the processing of individual parts of the document in a specialised way, produces superior (in a variety of significant ways) results than document analysis and understanding techniques devised for contemporary documents

The NASA Astrophysics Data System: Data Holdings

Since its inception in 1993, the ADS Abstract Service has become an indispensable research tool for astronomers and astrophysicists worldwide. In those seven years, much effort has been directed toward improving both the quantity and the quality of references in the database. From the original database of approximately 160,000 astronomy abstracts, our dataset has grown almost tenfold to approximately 1.5 million references covering astronomy, astrophysics, planetary sciences, physics, optics, and engineering. We collect and standardize data from approximately 200 journals and present the resulting information in a uniform, coherent manner. With the cooperation of journal publishers worldwide, we have been able to place scans of full journal articles on-line back to the first volumes of many astronomical journals, and we are able to link to current version of articles, abstracts, and datasets for essentially all of the current astronomy literature. The trend toward electronic publishing in the field, the use of electronic submission of abstracts for journal articles and conference proceedings, and the increasingly prominent use of the World Wide Web to disseminate information have enabled the ADS to build a database unparalleled in other disciplines. The ADS can be accessed at http://adswww.harvard.eduComment: 24 pages, 1 figure, 6 tables, 3 appendice

An Experimental Digital Library Platform - A Demonstrator Prototype for the DigLib Project at SICS

Within the framework of the Digital Library project at SICS, this thesis describes the implementation of a demonstrator prototype of a digital library (DigLib); an experimental platform integrating several functions in one common interface. It includes descriptions of the structure and formats of the digital library collection, the tailoring of the search engine Dienst, the construction of a keyword extraction tool, and the design and development of the interface. The platform was realised through sicsDAIS, an agent interaction and presentation system, and is to be used for testing and evaluating various tools for information seeking. The platform supports various user interaction strategies by providing: search in bibliographic records (Dienst); an index of keywords (the Keyword Extraction Function (KEF)); and browsing through the hierarchical structure of the collection. KEF was developed for this thesis work, and extracts and presents keywords from Swedish documents. Although based on a comparatively simple algorithm, KEF contributes by supplying a long-felt want in the area of Information Retrieval. Evaluations of the tasks and the interface still remain to be done, but the digital library is very much up and running. By implementing the platform through sicsDAIS, DigLib can deploy additional tools and search engines without interfering with already running modules. If wanted, agents providing other services than SICS can supply, can be plugged in

Finding scientific articles in a large digital archive: BioStor and the Biodiversity Heritage Library

The Biodiversity Heritage Library (BHL) is a large digital archive of legacy biological literature, comprising over 31 million pages scanned from books, monographs, and journals. During the digitisation process basic metadata about the scanned items is recorded, but not article-level metadata. Given that the article is the standard unit of citation, this makes it difficult to locate cited literature in BHL. Adding the ability to easily find articles in BHL would greatly enhance the value of the archive. A service was developed to locate articles in BHL based on matching article metadata to BHL metadata using approximate string matching, regular expressions, and string alignment. This article finding service is exposed as a standard OpenURL resolver on the BioStor web site "http://biostor.org/openurl/":http://biostor.org/openurl/. This resolver can be used on the web, or called by bibliographic tools that support OpenURL. BioStor provides tools for extracting, annotating, and visualising articles from the Biodiversity Heritage Library. BioStor is available from "http://biostor.org/":http://biostor.org/