Approximating Smallest Containers for Packing Three-dimensional Convex Objects

We investigate the problem of computing a minimal-volume container for the non-overlapping packing of a given set of three-dimensional convex objects. Already the simplest versions of the problem are NP-hard so that we cannot expect to find exact polynomial time algorithms. We give constant ratio approximation algorithms for packing axis-parallel (rectangular) cuboids under translation into an axis-parallel (rectangular) cuboid as container, for cuboids under rigid motions into an axis-parallel cuboid or into an arbitrary convex container, and for packing convex polyhedra under rigid motions into an axis-parallel cuboid or arbitrary convex container. This work gives the first approximability results for the computation of minimal volume containers for the objects described

Practical methods for approximating shortest paths on a convex polytope in R3

AbstractWe propose an extremely simple approximation scheme for computing shortest paths on the surface of a convex polytope in three dimensions. Given a convex polytope P with n vertices and two points p, q on its surface, let dP(p, q) denote the shortest path distance between p and q on the surface of P. Our algorithm produces a path of length at most 2dP(p, q) in time O(n). Extending this result, we can also compute an approximation of the shortest path tree rooted at an arbitrary point x ∈ P in time O(n log n). In the approximate tree, the distance between a vertex v ∈ P and x is at most cdP(x, v), where c = 2.38(1 + ε) for any fixed ε > 0. The best algorithms for computing an exact shortest path on a convex polytope take Ω(n2) time in the worst case; in addition, they are too complicated to be suitable in practice. We can also get a weak approximation result in the general case of k disjoint convex polyhedra: in O(n) time our algorithm gives a path of length at most 2k times the optimal

Analysis of parametric biological models with non-linear dynamics

In this paper we present recent results on parametric analysis of biological models. The underlying method is based on the algorithms for computing trajectory sets of hybrid systems with polynomial dynamics. The method is then applied to two case studies of biological systems: one is a cardiac cell model for studying the conditions for cardiac abnormalities, and the second is a model of insect nest-site choice.Comment: In Proceedings HSB 2012, arXiv:1208.315

Separation-Sensitive Collision Detection for Convex Objects

We develop a class of new kinetic data structures for collision detection between moving convex polytopes; the performance of these structures is sensitive to the separation of the polytopes during their motion. For two convex polygons in the plane, let $D$ be the maximum diameter of the polygons, and let $s$ be the minimum distance between them during their motion. Our separation certificate changes $O(\log(D/s))$ times when the relative motion of the two polygons is a translation along a straight line or convex curve, $O(\sqrt{D/s})$ for translation along an algebraic trajectory, and $O(D/s)$ for algebraic rigid motion (translation and rotation). Each certificate update is performed in $O(\log(D/s))$ time. Variants of these data structures are also shown that exhibit \emph{hysteresis}---after a separation certificate fails, the new certificate cannot fail again until the objects have moved by some constant fraction of their current separation. We can then bound the number of events by the combinatorial size of a certain cover of the motion path by balls.Comment: 10 pages, 8 figures; to appear in Proc. 10th Annual ACM-SIAM Symposium on Discrete Algorithms, 1999; see also http://www.uiuc.edu/ph/www/jeffe/pubs/kollide.html ; v2 replaces submission with camera-ready versio

Witness (Delaunay) Graphs

Proximity graphs are used in several areas in which a neighborliness relationship for input data sets is a useful tool in their analysis, and have also received substantial attention from the graph drawing community, as they are a natural way of implicitly representing graphs. However, as a tool for graph representation, proximity graphs have some limitations that may be overcome with suitable generalizations. We introduce a generalization, witness graphs, that encompasses both the goal of more power and flexibility for graph drawing issues and a wider spectrum for neighborhood analysis. We study in detail two concrete examples, both related to Delaunay graphs, and consider as well some problems on stabbing geometric objects and point set discrimination, that can be naturally described in terms of witness graphs.Comment: 27 pages. JCCGG 200

Minimizing Cubic and Homogeneous Polynomials over Integers in the Plane

We complete the complexity classification by degree of minimizing a polynomial over the integer points in a polyhedron in $\mathbb{R}^2$. Previous work shows that optimizing a quadratic polynomial over the integer points in a polyhedral region in $\mathbb{R}^2$ can be done in polynomial time, while optimizing a quartic polynomial in the same type of region is NP-hard. We close the gap by showing that this problem can be solved in polynomial time for cubic polynomials. Furthermore, we show that the problem of minimizing a homogeneous polynomial of any fixed degree over the integer points in a bounded polyhedron in $\mathbb{R}^2$ is solvable in polynomial time. We show that this holds for polynomials that can be translated into homogeneous polynomials, even when the translation vector is unknown. We demonstrate that such problems in the unbounded case can have smallest optimal solutions of exponential size in the size of the input, thus requiring a compact representation of solutions for a general polynomial time algorithm for the unbounded case

Geodesic Paths On 3D Surfaces: Survey and Open Problems

This survey gives a brief overview of theoretically and practically relevant algorithms to compute geodesic paths and distances on three-dimensional surfaces. The survey focuses on polyhedral three-dimensional surfaces