Automated Reconstruction of Dendritic and Axonal Trees by Global Optimization with Geometric Priors

We present a novel probabilistic approach to fully automated delineation of tree structures in noisy 2D images and 3D image stacks. Unlike earlier methods that rely mostly on local evidence, ours builds a set of candidate trees over many different subsets of points likely to belong to the optimal tree and then chooses the best one according to a global objective function that combines image evidence with geometric priors. Since the best tree does not necessarily span all the points, the algorithm is able to eliminate false detections while retaining the correct tree topology. Manually annotated brightfield micrographs, retinal scans and the DIADEM challenge datasets are used to evaluate the performance of our method. We used the DIADEM metric to quantitatively evaluate the topological accuracy of the reconstructions and showed that the use of the geometric regularization yields a substantial improvemen

An Improved Excitation Matching Method based on an Ant Colony Optimization for Suboptimal-Free Clustering in Sum-Difference Compromise Synthesis

Dealing with an excitation matching method, this paper presents a global optimization strategy for the optimal clustering in sum-difference compromise linear arrays. Starting from a combinatorial formulation of the problem at hand, the proposed technique is aimed at determining the sub-array configuration expressed as the optimal path inside a directed acyclic graph structure modelling the solution space. Towards this end, an ant colony metaheuristic is used to benefit of its hill-climbing properties in dealing with the non-convexity of the sub-arraying as well as in managing graph searches. A selected set of numerical experiments are reported to assess the efficiency and current limitations of the ant-based strategy also in comparison with previous local combinatorial search methods. (c) 2009 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other users, including reprinting/ republishing this material for advertising or promotional purposes, creating new collective works for resale or redistribution to servers or lists, or reuse of any copyrighted components of this work in other works

Combinatorial optimization and metaheuristics

Today, combinatorial optimization is one of the youngest and most active areas of discrete mathematics. It is a branch of optimization in applied mathematics and computer science, related to operational research, algorithm theory and computational complexity theory. It sits at the intersection of several fields, including artificial intelligence, mathematics and software engineering. Its increasing interest arises for the fact that a large number of scientific and industrial problems can be formulated as abstract combinatorial optimization problems, through graphs and/or (integer) linear programs. Some of these problems have polynomial-time (“efficient”) algorithms, while most of them are NP-hard, i.e. it is not proved that they can be solved in polynomial-time. Mainly, it means that it is not possible to guarantee that an exact solution to the problem can be found and one has to settle for an approximate solution with known performance guarantees. Indeed, the goal of approximate methods is to find “quickly” (reasonable run-times), with “high” probability, provable “good” solutions (low error from the real optimal solution). In the last 20 years, a new kind of algorithm commonly called metaheuristics have emerged in this class, which basically try to combine heuristics in high level frameworks aimed at efficiently and effectively exploring the search space. This report briefly outlines the components, concepts, advantages and disadvantages of different metaheuristic approaches from a conceptual point of view, in order to analyze their similarities and differences. The two very significant forces of intensification and diversification, that mainly determine the behavior of a metaheuristic, will be pointed out. The report concludes by exploring the importance of hybridization and integration methods

An approximate solution method based on tabu search for k-minimum spanning tree problems

This paper considers k-minimum spanning tree problems. An existing solution algorithm based on tabu search, which was proposed by Katagiri et al., includes an iterative solving procedure of minimum spanning tree (MST) problems for subgraphs to obtain a local optimal solution of k-minimum spanning tree problems. This article provides a new tabu-searchbased approximate solution method that does not iteratively solve minimum spanning tree problems. Results of numerical experiments show that the proposed method provides a good performance in terms of accuracy over those of existing methods for relatively high cardinality k

An Order-based Algorithm for Minimum Dominating Set with Application in Graph Mining

Dominating set is a set of vertices of a graph such that all other vertices have a neighbour in the dominating set. We propose a new order-based randomised local search (RLS$_o$) algorithm to solve minimum dominating set problem in large graphs. Experimental evaluation is presented for multiple types of problem instances. These instances include unit disk graphs, which represent a model of wireless networks, random scale-free networks, as well as samples from two social networks and real-world graphs studied in network science. Our experiments indicate that RLS$_o$ performs better than both a classical greedy approximation algorithm and two metaheuristic algorithms based on ant colony optimisation and local search. The order-based algorithm is able to find small dominating sets for graphs with tens of thousands of vertices. In addition, we propose a multi-start variant of RLS$_o$ that is suitable for solving the minimum weight dominating set problem. The application of RLS$_o$ in graph mining is also briefly demonstrated

An ant system algorithm for automated trajectory planning

The paper presents an Ant System based algorithm to optimally plan multi-gravity assist trajectories. The algorithm is designed to solve planning problems in which there is a strong dependency of one decision one all the previously made decisions. In the case of multi-gravity assist trajectories planning, the number of possible paths grows exponentially with the number of planetary encounters. The proposed algorithm avoids scanning all the possible paths and provides good results at a low computational cost. The algorithm builds the solution incrementally, according to Ant System paradigms. Unlike standard ACO, at every planetary encounter, each ant makes a decision based on the information stored in a tabu and feasible list. The approach demonstrated to be competitive, on a number of instances of a real trajectory design problem, against known GA and PSO algorithms

Ant Colony Optimization. A Computational Intelligence Technique

Ant colony optimization (ACO) is a novel computational technique inspired by a foraging behavior of ants has been successfully applied for solving real world optimization problems. This behavioral pattern inspires artificial ants for the search of solutions to the various types of optimization problems. ACO is a probabilistic search approach founded on the idea of evolutionary process. In this paper, we present an overview of ant colony optimization and ACO variants up to now. we also summarize various types of applications. Finally we focus on some research efforts directed at receiving a dipper understanding of the ant colony optimization algorithms

A new hybrid evolutionary algorithm for the huge k

In recent years it has been shown that an intelligent combination of metaheuristics with other optimization techniques can significantly improve over the application of a pure metaheuristic. In this paper, we combine the evolutionary computation paradigm with dynamic programming for the application to the NP-hard k-cardinality tree problem. Given an undirected graph G with node and edge weights, this problem consists of finding a tree in G with exactly k edges such that the sum of the weights is minimal. The genetic operators of our algorithm are based on an existing dynamic programming algorithm from the literature for finding optimal subtrees in a given tree. The simulation results show that our algorithm is able to improve the best known results for benchmark problems from the literature in 60 cases