Characterizing autistic disorder based on principle component analysis

Autism is often diagnosed during preschool or toddled age. This diagnosis often depends on behavioral test. It is known that individuals with autism have abnormal brain signals different from typical persons yet this difference in signals is slight that it is often difficult to distinguish from the normal. However, Electroencephalogram (EEG) signals have a lot of information which reflect the behavior of brain functions which therefore captures the marker for autism, help to early diagnose and speed the treatment. This work investigates and compares classification process for autism in open-eyed tasks and motor movement by using Principle Component Analysis (PCA) for feature extracted in Time-frequency domain to reduce data dimension. The results show that the proposed method gives accuracy in the range 90-100% for autism and normal children in motor task and around 90% to detect normal in open-eyed tasks though difficult to detect autism in this task

TEMPORAL DATA EXTRACTION AND QUERY SYSTEM FOR EPILEPSY SIGNAL ANALYSIS

The 2016 Epilepsy Innovation Institute (Ei2) community survey reported that unpredictability is the most challenging aspect of seizure management. Effective and precise detection, prediction, and localization of epileptic seizures is a fundamental computational challenge. Utilizing epilepsy data from multiple epilepsy monitoring units can enhance the quantity and diversity of datasets, which can lead to more robust epilepsy data analysis tools. The contributions of this dissertation are two-fold. One is the implementation of a temporal query for epilepsy data; the other is the machine learning approach for seizure detection, seizure prediction, and seizure localization. The three key components of our temporal query interface are: 1) A pipeline for automatically extract European Data Format (EDF) information and epilepsy annotation data from cross-site sources; 2) Data quantity monitoring for Epilepsy temporal data; 3) A web-based annotation query interface for preliminary research and building customized epilepsy datasets. The system extracted and stored about 450,000 epilepsy-related events of more than 2,497 subjects from seven institutes up to September 2019. Leveraging the epilepsy temporal events query system, we developed machine learning models for seizure detection, prediction, and localization. Using 135 extracted features from EEG signals, we trained a channel-based eXtreme Gradient Boosting model to detect seizures on 8-second EEG segments. A long-term EEG recording evaluation shows that the model can detect about 90.34% seizures on an existing EEG dataset with 961 hours of data. The model achieved 89.88% accuracy, 92.32% sensitivity, and 84.76% AUC based on the segments evaluation. We also introduced a transfer learning approach consisting of 1) a base deep learning model pre-trained by ImageNet dataset and 2) customized fully connected layers, to train the patient-specific pre-ictal and inter-ictal data from our database. Two convolutional neural network architectures were evaluated using 53 pre-ictal segments and 265 continuous hours of inter-ictal EEG data. The evaluation shows that our model reached 86.79% sensitivity and 3.38% false-positive rate. Another transfer learning model for seizure localization uses a pre-trained ResNext50 structure and was trained with an image augmentation dataset labeling by fingerprint. Our model achieved 88.22% accuracy, 34.99% sensitivity, 1.02% false-positive rate, and 34.3% positive likelihood rate

EEG analytics for early detection of autism spectrum disorder: a data-driven approach

Autism spectrum disorder (ASD) is a complex and heterogeneous disorder, diagnosed on the basis of behavioral symptoms during the second year of life or later. Finding scalable biomarkers for early detection is challenging because of the variability in presentation of the disorder and the need for simple measurements that could be implemented routinely during well-baby checkups. EEG is a relatively easy-to-use, low cost brain measurement tool that is being increasingly explored as a potential clinical tool for monitoring atypical brain development. EEG measurements were collected from 99 infants with an older sibling diagnosed with ASD, and 89 low risk controls, beginning at 3 months of age and continuing until 36 months of age. Nonlinear features were computed from EEG signals and used as input to statistical learning methods. Prediction of the clinical diagnostic outcome of ASD or not ASD was highly accurate when using EEG measurements from as early as 3 months of age. Specificity, sensitivity and PPV were high, exceeding 95% at some ages. Prediction of ADOS calibrated severity scores for all infants in the study using only EEG data taken as early as 3 months of age was strongly correlated with the actual measured scores. This suggests that useful digital biomarkers might be extracted from EEG measurements.This research was supported by National Institute of Mental Health (NIMH) grant R21 MH 093753 (to WJB), National Institute on Deafness and Other Communication Disorders (NIDCD) grant R21 DC08647 (to HTF), NIDCD grant R01 DC 10290 (to HTF and CAN) and a grant from the Simons Foundation (to CAN, HTF, and WJB). We are especially grateful to the staff and students who worked on the study and to the families who participated. (R21 MH 093753 - National Institute of Mental Health (NIMH); R21 DC08647 - National Institute on Deafness and Other Communication Disorders (NIDCD); R01 DC 10290 - NIDCD; Simons Foundation)Published versio

Dynamic Complexity and Causality Analysis of Scalp EEG for Detection of Cognitive Deficits

This dissertation explores the potential of scalp electroencephalography (EEG) for the detection and evaluation of neurological deficits due to moderate/severe traumatic brain injury (TBI), mild cognitive impairment (MCI), and early Alzheimer’s disease (AD). Neurological disorders often cannot be accurately diagnosed without the use of advanced imaging modalities such as computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). Non-quantitative task-based examinations are also used. None of these techniques, however, are typically performed in the primary care setting. Furthermore, the time and expense involved often deters physicians from performing them, leading to potential worse prognoses for patients. If feasible, screening for cognitive deficits using scalp EEG would provide a fast, inexpensive, and less invasive alternative for evaluation of TBI post injury and detection of MCI and early AD. In this work various measures of EEG complexity and causality are explored as means of detecting cognitive deficits. Complexity measures include eventrelated Tsallis entropy, multiscale entropy, inter-regional transfer entropy delays, and regional variation in common spectral features, and graphical analysis of EEG inter-channel coherence. Causality analysis based on nonlinear state space reconstruction is explored in case studies of intensive care unit (ICU) signal reconstruction and detection of cognitive deficits via EEG reconstruction models. Significant contributions in this work include: (1) innovative entropy-based methods for analyzing event-related EEG data; (2) recommendations regarding differences in MCI/AD of common spectral and complexity features for different scalp regions and protocol conditions; (3) development of novel artificial neural network techniques for multivariate signal reconstruction; and (4) novel EEG biomarkers for detection of dementia

P300, Steady State Visual Evoked Potentials, And Hybrid Paradigms For A Brain Computer Interface Speller

The goal of this research was to evaluate and compare two types of brain computer interface (BCI) systems, P300 and steady state visually evoked potentials (SSVEP), as spelling paradigms and combine them as a hybrid approach. There were pilot experiments performed for designing the parameters of the SSVEP spelling paradigm including peak detection for different range of frequencies, placement of LEDs, design of the SSVEP stimulus board, and window time for the SSVEP peak detection processing. The next experiment was to evaluate the SSVEP spelling paradigm. Six subjects participated in the task. The accuracy of each frequency and average accuracy for each subject were considered. The second experiment was designed to compare the performance and accuracy of SSVEP, P300, and the combination of both paradigms as a simultaneous task. Ten subjects were considered for performing this experiment. Overall the average accuracy of the SSVEP spelling paradigm was 80.00 % and higher than the P300 spelling paradigm average accuracy which was 72.50 %, and both of the spelling paradigms have better accuracy than the hybrid paradigm with the average accuracy of 64.39 %

Gauging Working Memory Capacity from Differential Resting Brain Oscillations in Older Individuals with a Wearable Device

Working memory is a core cognitive function and its deficits is one of the most common cognitive impairments. Reduced working memory capacity manifests as reduced accuracy in memory recall and prolonged speed of memory retrieval in older adults. Currently, the relationship between healthy older individuals’ age-related changes in resting brain oscillations and their working memory capacity is not clear. Eyes-closed resting electroencephalogram (rEEG) is gaining momentum as a potential neuromarker of mild cognitive impairments. Wearable and wireless EEG headset measuring key electrophysiological brain signals during rest and a working memory task was utilized. This research’s central hypothesis is that rEEG (e.g., eyes closed for 90 s) frequency and network features are surrogate markers for working memory capacity in healthy older adults. Forty-three older adults’ memory performance (accuracy and reaction times), brain oscillations during rest, and inter-channel magnitude-squared coherence during rest were analyzed. We report that individuals with a lower memory retrieval accuracy showed significantly increased alpha and beta oscillations over the right parietal site. Yet, faster working memory retrieval was significantly correlated with increased delta and theta band powers over the left parietal sites. In addition, significantly increased coherence between the left parietal site and the right frontal area is correlated with the faster speed in memory retrieval. The frontal and parietal dynamics of resting EEG is associated with the “accuracy and speed trade-off” during working memory in healthy older adults. Our results suggest that rEEG brain oscillations at local and distant neural circuits are surrogates of working memory retrieval’s accuracy and processing speed. Our current findings further indicate that rEEG frequency and coherence features recorded by wearable headsets and a brief resting and task protocol are potential biomarkers for working memory capacity. Additionally, wearable headsets are useful for fast screening of cognitive impairment risk

Brain Computer Interfaces and Emotional Involvement: Theory, Research, and Applications

This reprint is dedicated to the study of brain activity related to emotional and attentional involvement as measured by Brain–computer interface (BCI) systems designed for different purposes. A BCI system can translate brain signals (e.g., electric or hemodynamic brain activity indicators) into a command to execute an action in the BCI application (e.g., a wheelchair, the cursor on the screen, a spelling device or a game). These tools have the advantage of having real-time access to the ongoing brain activity of the individual, which can provide insight into the user’s emotional and attentional states by training a classification algorithm to recognize mental states. The success of BCI systems in contemporary neuroscientific research relies on the fact that they allow one to “think outside the lab”. The integration of technological solutions, artificial intelligence and cognitive science allowed and will allow researchers to envision more and more applications for the future. The clinical and everyday uses are described with the aim to invite readers to open their minds to imagine potential further developments