Detection and Classification of EEG Epileptiform Transients with RBF Networks using Hilbert Huang Transform-derived Features

Diagnosis of epilepsy or epileptic transients AEP (Abnormal Epileptiform Paroxysmal) is tedious, but important, and an expensive process. The process involves trained neurologists going over the patient\u27s EEG records looking for epileptiform discharge like events and classifying it as AEP (Abnormal Epileptiform Paroxysmal) or non-AEP. The objective of this research is to automate the process of detecting such events and classifying them into AEP(definitely an Epileptiform Transient) and non-AEPs (unlikely an epileptiform transient). The problem is approached in two separate steps and cascaded to validate and analyze the performance of the overall system. The first step is a detection problem to find the Epileptiform like transients (ETs) from the Electroencephalograph (EEG) of a patient. A Radial basis function-based neural network has been trained using a training set consisting of examples from both classes (ETs and non-ETs). The ETs are the yellow boxes which are marked by expert neurologists. There are no particular examples of non-ETs and any data not annotated by experts can be considered to be examples of non-ETs. The second step is classification of the detected ETs also known as yellow boxes, into AEPs or non-AEPs. A similar Radial basis function-based neural network has been trained using the ETs marked and classified into AEPs and non-AEPs manually by seven expert neurologists. The annotations or yellow boxes along with the contextual signal was used to extract features using the Hilbert Huang Transform. The system is validated by considering an entire epoch of the patient EEG and potential ETs are identified using the detector. The potential ETs marked by the detector are classified into AEPs and non-AEPs and compared against the annotations marked by the experts

Design of wearable EEG device for seizures early detection

This paper presents the design of a wearable electroencephalography device and signal processing algorithm for early detection and forecasting of the epileptiform activity. The availability of the examination of functional brain activity for a prolonged period, outside of the hospital facilities, can provide new advantages in early diagnosis and intervention systems. In this study, the low-cost five-channel device is presented. The system consists of two main parts: the data acquisition and transmission units and processing algorithms. In order to create the robust epileptiform pattern recognition approach the application of statistical sampling and signal processing techniques are performed. The discrete wavelet and Hilbert-Huang transforms with principal component analysis are used in order to extract and select a low-dimension feature vector

Electroencephalogram data platform for application of reduction methods

Long-term electroencephalogram (EEG) monitoring (≥24-h) is a resourceful tool for properly diagnosis sparse life-threatening events like non-convulsive seizures and status epilepticus in Intensive Care Unit (ICU) inpatients. Such EEG data requires objective methods for data reduction, transmission and analysis. This work aims to assess specificity and sensibility of HaEEG and aEEG methods in combination with conventional multichannel EEG when achieving seizure detection. A database architecture was designed to handle the interoperability, processing, and analysis of EEG data. Using data from CHB-MIT public EEG database, the reduced signal was obtained by EEG envelope segmentation, with 10 and 90 percentiles obtained for each segment. The use of asymmetrical filtering (2-15 Hz) and overall clinical band (1-70 Hz) was compared. The upper and lower margins of compressed segments were used to classify ictal and non-ictal epochs. Such classification was compared with the corresponding specialist seizure annotation for each patient. The difference between medians of instantaneous frequencies of ictal and non-ictal periods were assessed using Wilcoxon Rank Sum Test, which was significant for signals filtered from 2 to 15 Hz (p = 0.0055) but not for signals filtered from 1 to 70 Hz (p = 0.1816).O eletroencefalograma (EEG) de longa duração (≥24-h) em monitoramento contínuo é diferencial no diagnóstico e classificação de eventos epileptiformes, como crises não convulsivas e status epilepticus, em pacientes de Unidades de Tratamento Intensivo (UTI). Este exame requer métodos objetivos de análise, redução e transmissão de dados. O objetivo desse trabalho é avaliar a especificidade e a sensibilidade dos métodos HaEEG e aEEG em combinação com EEG multicanal convencional na detecção de eventos epileptiformes. Uma arquitetura de integração de dados foi projetada para gerir o armazenamento, processamento e análise de dados de EEG. Foram utilizados dados do banco de dados de EEG público do CHB-MIT. O sinal reduzido foi obtido pela segmentação do envelope do EEG, com percentis 10 e 90 obtidos para cada segmento. A aplicação do filtro assimétrico (2-15 Hz) e em bandas clínicas (1-70 Hz) foi comparada. Os limiares superiores e inferiores dos segmentos do aEEG e HaEEG foram usados para classificar épocas ictais e não ictais. A classificação foi comparada com as anotações feitas por um especialista para cada paciente. As medianas das frequências instantâneas para períodos ictais e não ictais foram analisadas com Wilcoxon Rank Sum Test com significância para filtragem assimétrica (p = 0,0055), mas não nas bandas clínicas (p = 0,1816)

Epileptic seizure detection and prediction based on EEG signal

Epilepsy is a kind of chronic brain disfunction, manifesting as recurrent seizures which is caused by sudden and excessive discharge of neurons. Electroencephalogram (EEG) recordings is regarded as the golden standard for clinical diagnosis of epilepsy disease. The diagnosis of epilepsy disease by professional doctors clinically is time-consuming. With the help artificial intelligence algorithms, the task of automatic epileptic seizure detection and prediction is called a research hotspot. The thesis mainly contributes to propose a solution to overfitting problem of EEG signal in deep learning and a method of multiple channels fusion for EEG features. The result of proposed method achieves outstanding performance in seizure detection task and seizure prediction task. In seizure detection task, this paper mainly explores the effect of the deep learning in small data size. This thesis designs a hybrid model of CNN and SVM for epilepsy detection compared with end-to-end classification by deep learning. Another technique for overfitting is new EEG signal generation based on decomposition and recombination of EEG in time-frequency domain. It achieved a classification accuracy of 98.8%, a specificity of 98.9% and a sensitivity of 98.4% on the classic Bonn EEG data. In seizure prediction task, this paper proposes a feature fusion method for multi-channel EEG signals. We extract a three-order tensor feature in temporal, spectral and spatial domain. UMLDA is a tensor-to-vector projection method, which ensures minimal redundancy between feature dimensions. An excellent experimental result was finally obtained, including an average accuracy of 95%, 94% F1-measure and 90% Kappa index

Automatic detection of epileptic slow-waves in EEG based on empirical mode decomposition and wavelet transform

Slow-wave is one of the most typical epileptic activities in EEGs and plays an important role in the diagnosis of disorders related to epilepsy in clinic. However artifacts such as blinking resemble slow-waves in shape and confuse slow-wave detection. Thus, differentiating and removing these artifacts are of great importance in slow-wave detection. In this paper, we propose an improved slow-wave detection algorithm based on discrete wavelet transform (DWT) that specially concerns on removal of blinking artifact (BA). EMD that can break down a complicated signal without a basis function such as sine or wavelet functions is used to decompose EEG. Two intrinsic mode functions (IMFs) which have BA’s characteristic are extracted. Then, we compute the similarity between original EEG and the combination of IMFs for identifying BA. Regression method is used to remove influence of BA from all channels. Finally, improved DWT is employed to detect slow-waves. We employ this method to clinical data and results show that the average false detection rate of the improved method is much lower than that of the traditional DWT method

Hilbert-Huang Transform: biosignal analysis and practical implementation

Any system, however trivial, is subjected to data analysis on the signals it produces. Over the last 50 years the influx of new techniques and expansions of older ones have allowed a number of new applications, in a variety of fields, to be analysed and to some degree understood. One of the industries that is benefiting from this growth is the medical field and has been further progressed with the growth of interdisciplinary collaboration. From a signal processing perspective, the challenge comes from the complex and sometimes chaotic nature of the signals that we measure from the body, such as those from the brain and to some degree the heart. In this work we will make a contribution to dealing with such systems, in the form of a recent time-frequency data analysis method, the Hilbert-Huang Transform (HHT), and extensions to it. This thesis presents an analysis of the state of the art in seizure and heart arrhythmia detection and prediction methods. We then present a novel real-time implementation of the algorithm both in software and hardware and the motivations for doing so. First, we present our software implementation, encompassing realtime capabilities and identifying elements that need to be considered for practical use. We then translated this software into hardware to aid real-time implementation and integration. With these implementations in place we apply the HHT method to the topic of epilepsy (seizures) and additionally make contributions to heart arrhythmias and neonate brain dynamics. We use the HHT and some additional algorithms to quantify features associated with each application for detection and prediction. We also quantify significance of activity in such a way as to merge prediction and detection into one framework. Finally, we assess the real-time capabilities of our methods for practical use as a biosignal analysis tool

Methods for Detecting High-Frequency Oscillations in Ongoing Brain Signals: Application to the Determination of Epileptic Seizure Onset Zones

Epilepsy is a neurological disorder with varied expression. Patients with focal onset seizures that are resistant to medications can benefit from ablative surgery. However, localization of the seizure onset zone (SOZ) and characterization of propagation to secondary areas can be challenging. The present study aimed at developing the appropriate signal processing methodology to detect bursts of interictal high-frequency oscillations (HFOs), as a possible signature of the SOZ, in patients with drug-resistant partial epilepsy. Additionally, invasive interictal and ictal intracranial electroencephalography (iEEG) data and non-invasive electromagnetic source imaging with magnetoencephalography (MEG) data from three subjects were analyzed. We developed a novel algorithm that extracts HFO bursts from the envelope of iEEG and MEG traces in the [80-300] Hz range. Clusters of HFO events across multichannel iEEG traces were subsequently analyzed to investigate their relative time delays and to infer possible propagation patterns during the interictal period and episodes of ictal onset (iEEG only). The location of iEEG electrodes sustaining the HFO bursts were labeled with respect to the chronometry of the local HFOs. The recording site bearing the smallest rank was labeled as the lead generator of HFO discharges. The aim of using MEG traces was essentially to determine probable SOZ locations non-invasively by extending the results obtained with iEEG. We proposed a new metric referred to as `spiking index\u27 that was computed at each cortical site in the vicinity of iEEG electrode locations (iEEG and MEG data were obtained for the same patients: iEEG was considered as the standard of reference for MEG results). The sensitivity and specificity of the HFO detector operating from ongoing brain traces were evaluated. Our results indicate that higher values of spiking index and higher rates of HFOs corresponded to brain regions that were identified independently as the SOZ by an expert clinician and as determined by the location and extent of the cortical resection that freed the patients from the seizures. Interictal and ictal iEEG HFO localization showed good concordance with the location of resected areas. The use of interictal data only, if used for surgical planning, would reduce the time required for making decisions regarding the resection of cortex and improve the chances of success of surgery in making patients become seizure-free. Obtaining iEEG data is invasive, with possible risks to the patients, and requires an expensive procedure. Another fundamental disadvantage of iEEG is that the implanted electrode grids and strips needed to cover the supposed abnormal cortical areas for proper determination of the SOZ. Our results indicate that the spiking index and rate map obtained from MEG source maps may provide a non-invasive alternative for determination of the SOZ and may provide greater accuracy to the placement of the implantable electrodes, and eventually avoid an invasive exploratory procedure before surgery

Data-driven multivariate and multiscale methods for brain computer interface

This thesis focuses on the development of data-driven multivariate and multiscale methods for brain computer interface (BCI) systems. The electroencephalogram (EEG), the most convenient means to measure neurophysiological activity due to its noninvasive nature, is mainly considered. The nonlinearity and nonstationarity inherent in EEG and its multichannel recording nature require a new set of data-driven multivariate techniques to estimate more accurately features for enhanced BCI operation. Also, a long term goal is to enable an alternative EEG recording strategy for achieving long-term and portable monitoring. Empirical mode decomposition (EMD) and local mean decomposition (LMD), fully data-driven adaptive tools, are considered to decompose the nonlinear and nonstationary EEG signal into a set of components which are highly localised in time and frequency. It is shown that the complex and multivariate extensions of EMD, which can exploit common oscillatory modes within multivariate (multichannel) data, can be used to accurately estimate and compare the amplitude and phase information among multiple sources, a key for the feature extraction of BCI system. A complex extension of local mean decomposition is also introduced and its operation is illustrated on two channel neuronal spike streams. Common spatial pattern (CSP), a standard feature extraction technique for BCI application, is also extended to complex domain using the augmented complex statistics. Depending on the circularity/noncircularity of a complex signal, one of the complex CSP algorithms can be chosen to produce the best classification performance between two different EEG classes. Using these complex and multivariate algorithms, two cognitive brain studies are investigated for more natural and intuitive design of advanced BCI systems. Firstly, a Yarbus-style auditory selective attention experiment is introduced to measure the user attention to a sound source among a mixture of sound stimuli, which is aimed at improving the usefulness of hearing instruments such as hearing aid. Secondly, emotion experiments elicited by taste and taste recall are examined to determine the pleasure and displeasure of a food for the implementation of affective computing. The separation between two emotional responses is examined using real and complex-valued common spatial pattern methods. Finally, we introduce a novel approach to brain monitoring based on EEG recordings from within the ear canal, embedded on a custom made hearing aid earplug. The new platform promises the possibility of both short- and long-term continuous use for standard brain monitoring and interfacing applications

Advances in epilepsy monitoring by detection and analysis of brain epileptiform discharges

Brain interictal and pre-ictal epileptiform discharges (EDs) are transient events occurred between two or before seizure onsets visible in intracranial electroencephalographs. In the diagnosis of epilepsy and localization of seizure sources, both interictal and ictal recordings are extremely informative. For this propose, computerized intelligent spike and seizure detection techniques have been researched and are constantly improving. This is not only to detect more EDs from over the scalp but also to classify epileptic and non-epileptic discharges. Tensor factorization and deep learning are two advanced and powerful techniques which have been recently suggested for ED detection. Here, our main contribution is to review recent ED detection methods with emphasis on multi-way analysis and deep learning approaches. These techniques have opened a new window to the epilepsy diagnosis and management spheres