15,545 research outputs found
Segmentation of the evolving left ventricle by learning the dynamics
We propose a method for recursive segmentation of the left ventricle
(LV) across a temporal sequence of magnetic resonance (MR) images.
The approach involves a technique for learning the LV boundary
dynamics together with a particle-based inference algorithm on
a loopy graphical model capturing the temporal periodicity of the
heart. The dynamic system state is a low-dimensional representation
of the boundary, and boundary estimation involves incorporating
curve evolution into state estimation. By formulating the problem
as one of state estimation, the segmentation at each particular
time is based not only on the data observed at that instant, but also
on predictions based on past and future boundary estimates. We assess
and demonstrate the effectiveness of the proposed framework
on a large data set of breath-hold cardiac MR image sequences
Preprocessing Solar Images while Preserving their Latent Structure
Telescopes such as the Atmospheric Imaging Assembly aboard the Solar Dynamics
Observatory, a NASA satellite, collect massive streams of high resolution
images of the Sun through multiple wavelength filters. Reconstructing
pixel-by-pixel thermal properties based on these images can be framed as an
ill-posed inverse problem with Poisson noise, but this reconstruction is
computationally expensive and there is disagreement among researchers about
what regularization or prior assumptions are most appropriate. This article
presents an image segmentation framework for preprocessing such images in order
to reduce the data volume while preserving as much thermal information as
possible for later downstream analyses. The resulting segmented images reflect
thermal properties but do not depend on solving the ill-posed inverse problem.
This allows users to avoid the Poisson inverse problem altogether or to tackle
it on each of 10 segments rather than on each of 10 pixels,
reducing computing time by a factor of 10. We employ a parametric
class of dissimilarities that can be expressed as cosine dissimilarity
functions or Hellinger distances between nonlinearly transformed vectors of
multi-passband observations in each pixel. We develop a decision theoretic
framework for choosing the dissimilarity that minimizes the expected loss that
arises when estimating identifiable thermal properties based on segmented
images rather than on a pixel-by-pixel basis. We also examine the efficacy of
different dissimilarities for recovering clusters in the underlying thermal
properties. The expected losses are computed under scientifically motivated
prior distributions. Two simulation studies guide our choices of dissimilarity
function. We illustrate our method by segmenting images of a coronal hole
observed on 26 February 2015
Cellular automata segmentation of brain tumors on post contrast MR images
In this paper, we re-examine the cellular automata(CA) al- gorithm to show that the result of its state evolution converges to that of the shortest path algorithm. We proposed a complete tumor segmenta- tion method on post contrast T1 MR images, which standardizes the VOI and seed selection, uses CA transition rules adapted to the problem and evolves a level set surface on CA states to impose spatial smoothness. Val- idation studies on 13 clinical and 5 synthetic brain tumors demonstrated the proposed algorithm outperforms graph cut and grow cut algorithms in all cases with a lower sensitivity to initialization and tumor type
Fast 2D/3D object representation with growing neural gas
This work presents the design of a real-time system to model visual objects with the use of self-organising networks. The architecture of the system addresses multiple computer vision tasks such as image segmentation, optimal parameter estimation and object representation. We first develop a framework for building non-rigid shapes using the growth mechanism of the self-organising maps, and then we define an optimal number of nodes without overfitting or underfitting the network based on the knowledge obtained from information-theoretic considerations. We present experimental results for hands and faces, and we quantitatively evaluate the matching capabilities of the proposed method with the topographic product. The proposed method is easily extensible to 3D objects, as it offers similar features for efficient mesh reconstruction
Multiscale Discriminant Saliency for Visual Attention
The bottom-up saliency, an early stage of humans' visual attention, can be
considered as a binary classification problem between center and surround
classes. Discriminant power of features for the classification is measured as
mutual information between features and two classes distribution. The estimated
discrepancy of two feature classes very much depends on considered scale
levels; then, multi-scale structure and discriminant power are integrated by
employing discrete wavelet features and Hidden markov tree (HMT). With wavelet
coefficients and Hidden Markov Tree parameters, quad-tree like label structures
are constructed and utilized in maximum a posterior probability (MAP) of hidden
class variables at corresponding dyadic sub-squares. Then, saliency value for
each dyadic square at each scale level is computed with discriminant power
principle and the MAP. Finally, across multiple scales is integrated the final
saliency map by an information maximization rule. Both standard quantitative
tools such as NSS, LCC, AUC and qualitative assessments are used for evaluating
the proposed multiscale discriminant saliency method (MDIS) against the
well-know information-based saliency method AIM on its Bruce Database wity
eye-tracking data. Simulation results are presented and analyzed to verify the
validity of MDIS as well as point out its disadvantages for further research
direction.Comment: 16 pages, ICCSA 2013 - BIOCA sessio
Learning the dynamics and time-recursive boundary detection of deformable objects
We propose a principled framework for recursively segmenting deformable objects across a sequence
of frames. We demonstrate the usefulness of this method on left ventricular segmentation across a cardiac
cycle. The approach involves a technique for learning the system dynamics together with methods of
particle-based smoothing as well as non-parametric belief propagation on a loopy graphical model capturing
the temporal periodicity of the heart. The dynamic system state is a low-dimensional representation
of the boundary, and the boundary estimation involves incorporating curve evolution into recursive state
estimation. By formulating the problem as one of state estimation, the segmentation at each particular
time is based not only on the data observed at that instant, but also on predictions based on past and future
boundary estimates. Although the paper focuses on left ventricle segmentation, the method generalizes
to temporally segmenting any deformable object
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