Including Physics in Deep Learning -- An example from 4D seismic pressure saturation inversion

Geoscience data often have to rely on strong priors in the face of uncertainty. Additionally, we often try to detect or model anomalous sparse data that can appear as an outlier in machine learning models. These are classic examples of imbalanced learning. Approaching these problems can benefit from including prior information from physics models or transforming data to a beneficial domain. We show an example of including physical information in the architecture of a neural network as prior information. We go on to present noise injection at training time to successfully transfer the network from synthetic data to field data.Comment: 5 pages, 5 figures, workshop, extended abstract, EAGE 2019 Workshop Programme, European Association of Geoscientists and Engineer

An empirical evaluation of imbalanced data strategies from a practitioner's point of view

This research tested the following well known strategies to deal with binary imbalanced data on 82 different real life data sets (sampled to imbalance rates of 5%, 3%, 1%, and 0.1%): class weight, SMOTE, Underbagging, and a baseline (just the base classifier). As base classifiers we used SVM with RBF kernel, random forests, and gradient boosting machines and we measured the quality of the resulting classifier using 6 different metrics (Area under the curve, Accuracy, F-measure, G-mean, Matthew's correlation coefficient and Balanced accuracy). The best strategy strongly depends on the metric used to measure the quality of the classifier. For AUC and accuracy class weight and the baseline perform better; for F-measure and MCC, SMOTE performs better; and for G-mean and balanced accuracy, underbagging

Learning to Auto Weight: Entirely Data-driven and Highly Efficient Weighting Framework

Example weighting algorithm is an effective solution to the training bias problem, however, most previous typical methods are usually limited to human knowledge and require laborious tuning of hyperparameters. In this paper, we propose a novel example weighting framework called Learning to Auto Weight (LAW). The proposed framework finds step-dependent weighting policies adaptively, and can be jointly trained with target networks without any assumptions or prior knowledge about the dataset. It consists of three key components: Stage-based Searching Strategy (3SM) is adopted to shrink the huge searching space in a complete training process; Duplicate Network Reward (DNR) gives more accurate supervision by removing randomness during the searching process; Full Data Update (FDU) further improves the updating efficiency. Experimental results demonstrate the superiority of weighting policy explored by LAW over standard training pipeline. Compared with baselines, LAW can find a better weighting schedule which achieves much more superior accuracy on both biased CIFAR and ImageNet.Comment: Accepted by AAAI 202

OhioState at SemEval-2018 Task 7: Exploiting Data Augmentation for Relation Classification in Scientific Papers using Piecewise Convolutional Neural Networks

We describe our system for SemEval-2018 Shared Task on Semantic Relation Extraction and Classification in Scientific Papers where we focus on the Classification task. Our simple piecewise convolution neural encoder performs decently in an end to end manner. A simple inter-task data augmentation signifi- cantly boosts the performance of the model. Our best-performing systems stood 8th out of 20 teams on the classification task on noisy data and 12th out of 28 teams on the classification task on clean data.Comment: To apperar in Proceedings of International Workshop on Semantic Evaluation (SemEval-2018

Towards Data-centric Graph Machine Learning: Review and Outlook

Data-centric AI, with its primary focus on the collection, management, and utilization of data to drive AI models and applications, has attracted increasing attention in recent years. In this article, we conduct an in-depth and comprehensive review, offering a forward-looking outlook on the current efforts in data-centric AI pertaining to graph data-the fundamental data structure for representing and capturing intricate dependencies among massive and diverse real-life entities. We introduce a systematic framework, Data-centric Graph Machine Learning (DC-GML), that encompasses all stages of the graph data lifecycle, including graph data collection, exploration, improvement, exploitation, and maintenance. A thorough taxonomy of each stage is presented to answer three critical graph-centric questions: (1) how to enhance graph data availability and quality; (2) how to learn from graph data with limited-availability and low-quality; (3) how to build graph MLOps systems from the graph data-centric view. Lastly, we pinpoint the future prospects of the DC-GML domain, providing insights to navigate its advancements and applications.Comment: 42 pages, 9 figure

Tackling Diverse Minorities in Imbalanced Classification

Imbalanced datasets are commonly observed in various real-world applications, presenting significant challenges in training classifiers. When working with large datasets, the imbalanced issue can be further exacerbated, making it exceptionally difficult to train classifiers effectively. To address the problem, over-sampling techniques have been developed to linearly interpolating data instances between minorities and their neighbors. However, in many real-world scenarios such as anomaly detection, minority instances are often dispersed diversely in the feature space rather than clustered together. Inspired by domain-agnostic data mix-up, we propose generating synthetic samples iteratively by mixing data samples from both minority and majority classes. It is non-trivial to develop such a framework, the challenges include source sample selection, mix-up strategy selection, and the coordination between the underlying model and mix-up strategies. To tackle these challenges, we formulate the problem of iterative data mix-up as a Markov decision process (MDP) that maps data attributes onto an augmentation strategy. To solve the MDP, we employ an actor-critic framework to adapt the discrete-continuous decision space. This framework is utilized to train a data augmentation policy and design a reward signal that explores classifier uncertainty and encourages performance improvement, irrespective of the classifier's convergence. We demonstrate the effectiveness of our proposed framework through extensive experiments conducted on seven publicly available benchmark datasets using three different types of classifiers. The results of these experiments showcase the potential and promise of our framework in addressing imbalanced datasets with diverse minorities

Beyond Volume: The Impact of Complex Healthcare Data on the Machine Learning Pipeline

From medical charts to national census, healthcare has traditionally operated under a paper-based paradigm. However, the past decade has marked a long and arduous transformation bringing healthcare into the digital age. Ranging from electronic health records, to digitized imaging and laboratory reports, to public health datasets, today, healthcare now generates an incredible amount of digital information. Such a wealth of data presents an exciting opportunity for integrated machine learning solutions to address problems across multiple facets of healthcare practice and administration. Unfortunately, the ability to derive accurate and informative insights requires more than the ability to execute machine learning models. Rather, a deeper understanding of the data on which the models are run is imperative for their success. While a significant effort has been undertaken to develop models able to process the volume of data obtained during the analysis of millions of digitalized patient records, it is important to remember that volume represents only one aspect of the data. In fact, drawing on data from an increasingly diverse set of sources, healthcare data presents an incredibly complex set of attributes that must be accounted for throughout the machine learning pipeline. This chapter focuses on highlighting such challenges, and is broken down into three distinct components, each representing a phase of the pipeline. We begin with attributes of the data accounted for during preprocessing, then move to considerations during model building, and end with challenges to the interpretation of model output. For each component, we present a discussion around data as it relates to the healthcare domain and offer insight into the challenges each may impose on the efficiency of machine learning techniques.Comment: Healthcare Informatics, Machine Learning, Knowledge Discovery: 20 Pages, 1 Figur