308 research outputs found

    A Comparison of Parallel Graph Processing Implementations

    Full text link
    The rapidly growing number of large network analysis problems has led to the emergence of many parallel and distributed graph processing systems---one survey in 2014 identified over 80. Since then, the landscape has evolved; some packages have become inactive while more are being developed. Determining the best approach for a given problem is infeasible for most developers. To enable easy, rigorous, and repeatable comparison of the capabilities of such systems, we present an approach and associated software for analyzing the performance and scalability of parallel, open-source graph libraries. We demonstrate our approach on five graph processing packages: GraphMat, the Graph500, the Graph Algorithm Platform Benchmark Suite, GraphBIG, and PowerGraph using synthetic and real-world datasets. We examine previously overlooked aspects of parallel graph processing performance such as phases of execution and energy usage for three algorithms: breadth first search, single source shortest paths, and PageRank and compare our results to Graphalytics.Comment: 10 pages, 10 figures, Submitted to EuroPar 2017 and rejected. Revised and submitted to IEEE Cluster 201

    Ringo: Interactive Graph Analytics on Big-Memory Machines

    Full text link
    We present Ringo, a system for analysis of large graphs. Graphs provide a way to represent and analyze systems of interacting objects (people, proteins, webpages) with edges between the objects denoting interactions (friendships, physical interactions, links). Mining graphs provides valuable insights about individual objects as well as the relationships among them. In building Ringo, we take advantage of the fact that machines with large memory and many cores are widely available and also relatively affordable. This allows us to build an easy-to-use interactive high-performance graph analytics system. Graphs also need to be built from input data, which often resides in the form of relational tables. Thus, Ringo provides rich functionality for manipulating raw input data tables into various kinds of graphs. Furthermore, Ringo also provides over 200 graph analytics functions that can then be applied to constructed graphs. We show that a single big-memory machine provides a very attractive platform for performing analytics on all but the largest graphs as it offers excellent performance and ease of use as compared to alternative approaches. With Ringo, we also demonstrate how to integrate graph analytics with an iterative process of trial-and-error data exploration and rapid experimentation, common in data mining workloads.Comment: 6 pages, 2 figure

    LLM: Realizing Low-Latency Memory by Exploiting Embedded Silicon Photonics for Irregular Workloads

    Get PDF
    As emerging workloads exhibit irregular memory access patterns with poor data reuse and locality, they would benefit from a DRAM that achieves low latency without sacrificing bandwidth and energy efficiency. We propose LLM (Low Latency Memory), a codesign of the DRAM microarchitecture, the memory controller and the LLC/DRAM interconnect by leveraging embedded silicon photonics in 2.5D/3D integrated system on chip. LLM relies on Wavelength Division Multiplexing (WDM)-based photonic interconnects to reduce the contention throughout the memory subsystem. LLM also increases the bank-level parallelism, eliminates bus conflicts by using dedicated optical data paths, and reduces the access energy per bit with shorter global bitlines and smaller row buffers. We evaluate the design space of LLM for a variety of synthetic benchmarks and representative graph workloads on a full-system simulator (gem5). LLM exhibits low memory access latency for traffics with both regular and irregular access patterns. For irregular traffic, LLM achieves high bandwidth utilization (over 80% peak throughput compared to 20% of HBM2.0). For real workloads, LLM achieves 3 × and 1.8 × lower execution time compared to HBM2.0 and a state-of-the-art memory system with high memory level parallelism, respectively. This study also demonstrates that by reducing queuing on the data path, LLM can achieve on average 3.4 × lower memory latency variation compared to HBM2.0

    GRAPE: Parallelizing Sequential Graph Computations

    Get PDF

    How to verify the precision of density-functional-theory implementations via reproducible and universal workflows

    Full text link
    In the past decades many density-functional theory methods and codes adopting periodic boundary conditions have been developed and are now extensively used in condensed matter physics and materials science research. Only in 2016, however, their precision (i.e., to which extent properties computed with different codes agree among each other) was systematically assessed on elemental crystals: a first crucial step to evaluate the reliability of such computations. We discuss here general recommendations for verification studies aiming at further testing precision and transferability of density-functional-theory computational approaches and codes. We illustrate such recommendations using a greatly expanded protocol covering the whole periodic table from Z=1 to 96 and characterizing 10 prototypical cubic compounds for each element: 4 unaries and 6 oxides, spanning a wide range of coordination numbers and oxidation states. The primary outcome is a reference dataset of 960 equations of state cross-checked between two all-electron codes, then used to verify and improve nine pseudopotential-based approaches. Such effort is facilitated by deploying AiiDA common workflows that perform automatic input parameter selection, provide identical input/output interfaces across codes, and ensure full reproducibility. Finally, we discuss the extent to which the current results for total energies can be reused for different goals (e.g., obtaining formation energies).Comment: Main text: 23 pages, 4 figures. Supplementary: 68 page
    corecore