280,166 research outputs found
Active learning in annotating micro-blogs dealing with e-reputation
Elections unleash strong political views on Twitter, but what do people
really think about politics? Opinion and trend mining on micro blogs dealing
with politics has recently attracted researchers in several fields including
Information Retrieval and Machine Learning (ML). Since the performance of ML
and Natural Language Processing (NLP) approaches are limited by the amount and
quality of data available, one promising alternative for some tasks is the
automatic propagation of expert annotations. This paper intends to develop a
so-called active learning process for automatically annotating French language
tweets that deal with the image (i.e., representation, web reputation) of
politicians. Our main focus is on the methodology followed to build an original
annotated dataset expressing opinion from two French politicians over time. We
therefore review state of the art NLP-based ML algorithms to automatically
annotate tweets using a manual initiation step as bootstrap. This paper focuses
on key issues about active learning while building a large annotated data set
from noise. This will be introduced by human annotators, abundance of data and
the label distribution across data and entities. In turn, we show that Twitter
characteristics such as the author's name or hashtags can be considered as the
bearing point to not only improve automatic systems for Opinion Mining (OM) and
Topic Classification but also to reduce noise in human annotations. However, a
later thorough analysis shows that reducing noise might induce the loss of
crucial information.Comment: Journal of Interdisciplinary Methodologies and Issues in Science -
Vol 3 - Contextualisation digitale - 201
Editorial for the First Workshop on Mining Scientific Papers: Computational Linguistics and Bibliometrics
The workshop "Mining Scientific Papers: Computational Linguistics and
Bibliometrics" (CLBib 2015), co-located with the 15th International Society of
Scientometrics and Informetrics Conference (ISSI 2015), brought together
researchers in Bibliometrics and Computational Linguistics in order to study
the ways Bibliometrics can benefit from large-scale text analytics and sense
mining of scientific papers, thus exploring the interdisciplinarity of
Bibliometrics and Natural Language Processing (NLP). The goals of the workshop
were to answer questions like: How can we enhance author network analysis and
Bibliometrics using data obtained by text analytics? What insights can NLP
provide on the structure of scientific writing, on citation networks, and on
in-text citation analysis? This workshop is the first step to foster the
reflection on the interdisciplinarity and the benefits that the two disciplines
Bibliometrics and Natural Language Processing can drive from it.Comment: 4 pages, Workshop on Mining Scientific Papers: Computational
Linguistics and Bibliometrics at ISSI 201
Conceptual biology, hypothesis discovery, and text mining: Swanson's legacy
Innovative biomedical librarians and information specialists who want to expand their roles as expert searchers need to know about profound changes in biology and parallel trends in text mining. In recent years, conceptual biology has emerged as a complement to empirical biology. This is partly in response to the availability of massive digital resources such as the network of databases for molecular biologists at the National Center for Biotechnology Information. Developments in text mining and hypothesis discovery systems based on the early work of Swanson, a mathematician and information scientist, are coincident with the emergence of conceptual biology. Very little has been written to introduce biomedical digital librarians to these new trends. In this paper, background for data and text mining, as well as for knowledge discovery in databases (KDD) and in text (KDT) is presented, then a brief review of Swanson's ideas, followed by a discussion of recent approaches to hypothesis discovery and testing. 'Testing' in the context of text mining involves partially automated methods for finding evidence in the literature to support hypothetical relationships. Concluding remarks follow regarding (a) the limits of current strategies for evaluation of hypothesis discovery systems and (b) the role of literature-based discovery in concert with empirical research. Report of an informatics-driven literature review for biomarkers of systemic lupus erythematosus is mentioned. Swanson's vision of the hidden value in the literature of science and, by extension, in biomedical digital databases, is still remarkably generative for information scientists, biologists, and physicians. © 2006Bekhuis; licensee BioMed Central Ltd
Large-scale event extraction from literature with multi-level gene normalization
Text mining for the life sciences aims to aid database curation, knowledge summarization and information retrieval through the automated processing of biomedical texts. To provide comprehensive coverage and enable full integration with existing biomolecular database records, it is crucial that text mining tools scale up to millions of articles and that their analyses can be unambiguously linked to information recorded in resources such as UniProt, KEGG, BioGRID and NCBI databases. In this study, we investigate how fully automated text mining of complex biomolecular events can be augmented with a normalization strategy that identifies biological concepts in text, mapping them to identifiers at varying levels of granularity, ranging from canonicalized symbols to unique gene and proteins and broad gene families. To this end, we have combined two state-of-the-art text mining components, previously evaluated on two community-wide challenges, and have extended and improved upon these methods by exploiting their complementary nature. Using these systems, we perform normalization and event extraction to create a large-scale resource that is publicly available, unique in semantic scope, and covers all 21.9 million PubMed abstracts and 460 thousand PubMed Central open access full-text articles. This dataset contains 40 million biomolecular events involving 76 million gene/protein mentions, linked to 122 thousand distinct genes from 5032 species across the full taxonomic tree. Detailed evaluations and analyses reveal promising results for application of this data in database and pathway curation efforts. The main software components used in this study are released under an open-source license. Further, the resulting dataset is freely accessible through a novel API, providing programmatic and customized access (http://www.evexdb.org/api/v001/). Finally, to allow for large-scale bioinformatic analyses, the entire resource is available for bulk download from http://evexdb.org/download/, under the Creative Commons -Attribution - Share Alike (CC BY-SA) license
Social media analytics: a survey of techniques, tools and platforms
This paper is written for (social science) researchers seeking to analyze the wealth of social media now available. It presents a comprehensive review of software tools for social networking media, wikis, really simple syndication feeds, blogs, newsgroups, chat and news feeds. For completeness, it also includes introductions to social media scraping, storage, data cleaning and sentiment analysis. Although principally a review, the paper also provides a methodology and a critique of social media tools. Analyzing social media, in particular Twitter feeds for sentiment analysis, has become a major research and business activity due to the availability of web-based application programming interfaces (APIs) provided by Twitter, Facebook and News services. This has led to an ‘explosion’ of data services, software tools for scraping and analysis and social media analytics platforms. It is also a research area undergoing rapid change and evolution due to commercial pressures and the potential for using social media data for computational (social science) research. Using a simple taxonomy, this paper provides a review of leading software tools and how to use them to scrape, cleanse and analyze the spectrum of social media. In addition, it discussed the requirement of an experimental computational environment for social media research and presents as an illustration the system architecture of a social media (analytics) platform built by University College London. The principal contribution of this paper is to provide an overview (including code fragments) for scientists seeking to utilize social media scraping and analytics either in their research or business. The data retrieval techniques that are presented in this paper are valid at the time of writing this paper (June 2014), but they are subject to change since social media data scraping APIs are rapidly changing
Intelligent Management and Efficient Operation of Big Data
This chapter details how Big Data can be used and implemented in networking
and computing infrastructures. Specifically, it addresses three main aspects:
the timely extraction of relevant knowledge from heterogeneous, and very often
unstructured large data sources, the enhancement on the performance of
processing and networking (cloud) infrastructures that are the most important
foundational pillars of Big Data applications or services, and novel ways to
efficiently manage network infrastructures with high-level composed policies
for supporting the transmission of large amounts of data with distinct
requisites (video vs. non-video). A case study involving an intelligent
management solution to route data traffic with diverse requirements in a wide
area Internet Exchange Point is presented, discussed in the context of Big
Data, and evaluated.Comment: In book Handbook of Research on Trends and Future Directions in Big
Data and Web Intelligence, IGI Global, 201
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