Exemplar Based Deep Discriminative and Shareable Feature Learning for Scene Image Classification

In order to encode the class correlation and class specific information in image representation, we propose a new local feature learning approach named Deep Discriminative and Shareable Feature Learning (DDSFL). DDSFL aims to hierarchically learn feature transformation filter banks to transform raw pixel image patches to features. The learned filter banks are expected to: (1) encode common visual patterns of a flexible number of categories; (2) encode discriminative information; and (3) hierarchically extract patterns at different visual levels. Particularly, in each single layer of DDSFL, shareable filters are jointly learned for classes which share the similar patterns. Discriminative power of the filters is achieved by enforcing the features from the same category to be close, while features from different categories to be far away from each other. Furthermore, we also propose two exemplar selection methods to iteratively select training data for more efficient and effective learning. Based on the experimental results, DDSFL can achieve very promising performance, and it also shows great complementary effect to the state-of-the-art Caffe features.Comment: Pattern Recognition, Elsevier, 201

Data Imputation through the Identification of Local Anomalies

We introduce a comprehensive and statistical framework in a model free setting for a complete treatment of localized data corruptions due to severe noise sources, e.g., an occluder in the case of a visual recording. Within this framework, we propose i) a novel algorithm to efficiently separate, i.e., detect and localize, possible corruptions from a given suspicious data instance and ii) a Maximum A Posteriori (MAP) estimator to impute the corrupted data. As a generalization to Euclidean distance, we also propose a novel distance measure, which is based on the ranked deviations among the data attributes and empirically shown to be superior in separating the corruptions. Our algorithm first splits the suspicious instance into parts through a binary partitioning tree in the space of data attributes and iteratively tests those parts to detect local anomalies using the nominal statistics extracted from an uncorrupted (clean) reference data set. Once each part is labeled as anomalous vs normal, the corresponding binary patterns over this tree that characterize corruptions are identified and the affected attributes are imputed. Under a certain conditional independency structure assumed for the binary patterns, we analytically show that the false alarm rate of the introduced algorithm in detecting the corruptions is independent of the data and can be directly set without any parameter tuning. The proposed framework is tested over several well-known machine learning data sets with synthetically generated corruptions; and experimentally shown to produce remarkable improvements in terms of classification purposes with strong corruption separation capabilities. Our experiments also indicate that the proposed algorithms outperform the typical approaches and are robust to varying training phase conditions

Cell Segmentation and Tracking using CNN-Based Distance Predictions and a Graph-Based Matching Strategy

The accurate segmentation and tracking of cells in microscopy image sequences is an important task in biomedical research, e.g., for studying the development of tissues, organs or entire organisms. However, the segmentation of touching cells in images with a low signal-to-noise-ratio is still a challenging problem. In this paper, we present a method for the segmentation of touching cells in microscopy images. By using a novel representation of cell borders, inspired by distance maps, our method is capable to utilize not only touching cells but also close cells in the training process. Furthermore, this representation is notably robust to annotation errors and shows promising results for the segmentation of microscopy images containing in the training data underrepresented or not included cell types. For the prediction of the proposed neighbor distances, an adapted U-Net convolutional neural network (CNN) with two decoder paths is used. In addition, we adapt a graph-based cell tracking algorithm to evaluate our proposed method on the task of cell tracking. The adapted tracking algorithm includes a movement estimation in the cost function to re-link tracks with missing segmentation masks over a short sequence of frames. Our combined tracking by detection method has proven its potential in the IEEE ISBI 2020 Cell Tracking Challenge (http://celltrackingchallenge.net/) where we achieved as team KIT-Sch-GE multiple top three rankings including two top performances using a single segmentation model for the diverse data sets.Comment: 25 pages, 14 figures, methods of the team KIT-Sch-GE for the IEEE ISBI 2020 Cell Tracking Challeng