15 research outputs found

    Differential geometry methods for biomedical image processing : from segmentation to 2D/3D registration

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    This thesis establishes a biomedical image analysis framework for the advanced visualization of biological structures. It consists of two important parts: 1) the segmentation of some structures of interest in 3D medical scans, and 2) the registration of patient-specific 3D models with 2D interventional images. Segmenting biological structures results in 3D computational models that are simple to visualize and that can be analyzed quantitatively. Registering a 3D model with interventional images permits to position the 3D model within the physical world. By combining the information from a 3D model and 2D interventional images, the proposed framework can improve the guidance of surgical intervention by reducing the ambiguities inherent to the interpretation of 2D images. Two specific segmentation problems are considered: 1) the segmentation of large structures with low frequency intensity nonuniformity, and 2) the detection of fine curvilinear structures. First, we directed our attention toward the segmentation of relatively large structures with low frequency intensity nonuniformity. Such structures are important in medical imaging since they are commonly encountered in MRI. Also, the nonuniform diffusion of the contrast agent in some other modalities, such as CTA, leads to structures of nonuniform appearance. A level-set method that uses a local-linear region model is defined, and applied to the challenging problem of segmenting brain tissues in MRI. The unique characteristics of the proposed method permit to account for important image nonuniformity implicitly. To the best of our knowledge, this is the first time a region-based level-set model has been used to perform the segmentation of real world MRI brain scans with convincing results. The second segmentation problem considered is the detection of fine curvilinear structures in 3D medical images. Detecting those structures is crucial since they can represent veins, arteries, bronchi or other important tissues. Unfortunately, most currently available curvilinear structure detection filters incur significant signal lost at bifurcations of two structures. This peculiarity limits the performance of all subsequent processes, whether it be understanding an angiography acquisition, computing an accurate tractography, or automatically classifying the image voxels. This thesis presents a new curvilinear structure detection filter that is robust to the presence of X- and Y-junctions. At the same time, it is conceptually simple and deterministic, and allows for an intuitive representation of the structure’s principal directions. Once a 3D computational model is available, it can be used to enhance surgical guidance. A 2D/3D non-rigid method is proposed that brings a 3D centerline model of the coronary arteries into correspondence with bi-plane fluoroscopic angiograms. The registered model is overlaid on top of the interventional angiograms to provide surgical assistance during image-guided chronic total occlusion procedures, which reduces the uncertainty inherent in 2D interventional images. A fully non-rigid registration model is proposed and used to compensate for any local shape discrepancy. This method is based on a variational framework, and uses a simultaneous matching and reconstruction process. With a typical run time of less than 3 seconds, the algorithms are fast enough for interactive applications

    Contemporary Robotics

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    This book book is a collection of 18 chapters written by internationally recognized experts and well-known professionals of the field. Chapters contribute to diverse facets of contemporary robotics and autonomous systems. The volume is organized in four thematic parts according to the main subjects, regarding the recent advances in the contemporary robotics. The first thematic topics of the book are devoted to the theoretical issues. This includes development of algorithms for automatic trajectory generation using redudancy resolution scheme, intelligent algorithms for robotic grasping, modelling approach for reactive mode handling of flexible manufacturing and design of an advanced controller for robot manipulators. The second part of the book deals with different aspects of robot calibration and sensing. This includes a geometric and treshold calibration of a multiple robotic line-vision system, robot-based inline 2D/3D quality monitoring using picture-giving and laser triangulation, and a study on prospective polymer composite materials for flexible tactile sensors. The third part addresses issues of mobile robots and multi-agent systems, including SLAM of mobile robots based on fusion of odometry and visual data, configuration of a localization system by a team of mobile robots, development of generic real-time motion controller for differential mobile robots, control of fuel cells of mobile robots, modelling of omni-directional wheeled-based robots, building of hunter- hybrid tracking environment, as well as design of a cooperative control in distributed population-based multi-agent approach. The fourth part presents recent approaches and results in humanoid and bioinspirative robotics. It deals with design of adaptive control of anthropomorphic biped gait, building of dynamic-based simulation for humanoid robot walking, building controller for perceptual motor control dynamics of humans and biomimetic approach to control mechatronic structure using smart materials

    Virtual Reality Games for Motor Rehabilitation

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    This paper presents a fuzzy logic based method to track user satisfaction without the need for devices to monitor users physiological conditions. User satisfaction is the key to any product’s acceptance; computer applications and video games provide a unique opportunity to provide a tailored environment for each user to better suit their needs. We have implemented a non-adaptive fuzzy logic model of emotion, based on the emotional component of the Fuzzy Logic Adaptive Model of Emotion (FLAME) proposed by El-Nasr, to estimate player emotion in UnrealTournament 2004. In this paper we describe the implementation of this system and present the results of one of several play tests. Our research contradicts the current literature that suggests physiological measurements are needed. We show that it is possible to use a software only method to estimate user emotion

    Geomorphometry 2020. Conference Proceedings

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    Geomorphometry is the science of quantitative land surface analysis. It gathers various mathematical, statistical and image processing techniques to quantify morphological, hydrological, ecological and other aspects of a land surface. Common synonyms for geomorphometry are geomorphological analysis, terrain morphometry or terrain analysis and land surface analysis. The typical input to geomorphometric analysis is a square-grid representation of the land surface: a digital elevation (or land surface) model. The first Geomorphometry conference dates back to 2009 and it took place in Zürich, Switzerland. Subsequent events were in Redlands (California), Nánjīng (China), Poznan (Poland) and Boulder (Colorado), at about two years intervals. The International Society for Geomorphometry (ISG) and the Organizing Committee scheduled the sixth Geomorphometry conference in Perugia, Italy, June 2020. Worldwide safety measures dictated the event could not be held in presence, and we excluded the possibility to hold the conference remotely. Thus, we postponed the event by one year - it will be organized in June 2021, in Perugia, hosted by the Research Institute for Geo-Hydrological Protection of the Italian National Research Council (CNR IRPI) and the Department of Physics and Geology of the University of Perugia. One of the reasons why we postponed the conference, instead of canceling, was the encouraging number of submitted abstracts. Abstracts are actually short papers consisting of four pages, including figures and references, and they were peer-reviewed by the Scientific Committee of the conference. This book is a collection of the contributions revised by the authors after peer review. We grouped them in seven classes, as follows: • Data and methods (13 abstracts) • Geoheritage (6 abstracts) • Glacial processes (4 abstracts) • LIDAR and high resolution data (8 abstracts) • Morphotectonics (8 abstracts) • Natural hazards (12 abstracts) • Soil erosion and fluvial processes (16 abstracts) The 67 abstracts represent 80% of the initial contributions. The remaining ones were either not accepted after peer review or withdrawn by their Authors. Most of the contributions contain original material, and an extended version of a subset of them will be included in a special issue of a regular journal publication

    Putting reaction-diffusion systems into port-Hamiltonian framework

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    Reaction-diffusion systems model the evolution of the constituents distributed in space under the influence of chemical reactions and diffusion [6], [10]. These systems arise naturally in chemistry [5], but can also be used to model dynamical processes beyond the realm of chemistry such as biology, ecology, geology, and physics. In this paper, by adopting the viewpoint of port-controlled Hamiltonian systems [7] we cast reaction-diffusion systems into the portHamiltonian framework. Aside from offering conceptually a clear geometric interpretation formalized by a Stokes-Dirac structure [8], a port-Hamiltonian perspective allows to treat these dissipative systems as interconnected and thus makes their analysis, both quantitative and qualitative, more accessible from a modern dynamical systems and control theory point of view. This modeling approach permits us to draw immediately some conclusions regarding passivity and stability of reaction-diffusion systems. It is well-known that adding diffusion to the reaction system can generate behaviors absent in the ode case. This primarily pertains to the problem of diffusion-driven instability which constitutes the basis of Turing’s mechanism for pattern formation [11], [5]. Here the treatment of reaction-diffusion systems as dissipative distributed portHamiltonian systems could prove to be instrumental in supply of the results on absorbing sets, the existence of the maximal attractor and stability analysis. Furthermore, by adopting a discrete differential geometrybased approach [9] and discretizing the reaction-diffusion system in port-Hamiltonian form, apart from preserving a geometric structure, a compartmental model analogous to the standard one [1], [2] is obtaine

    Annual Report of the Board of Regents of the Smithsonian Institution, showing the operations, expenditures, and condition of the Institution to July, 1885

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    Annual Report of the Smithsonian Institution. 17 July. HMD 15 (pts. 1 and 2) , 49-1. v25-26, 2235p. [2431-2432] Research related to the American India
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