An Exploratory Study of the Inputs for Ensemble Clustering Technique as a Subset Selection Problem

Ensemble and Consensus Clustering address the problem of unifying multiple clustering results into a single output to best reflect the agreement of input methods. They can be used to obtain more stable and robust clustering results in comparison with a single clustering approach. In this study, we propose a novel subset selection method that looks at controlling the number of clustering inputs and datasets in an efficient way. The authors propose a number of manual selection and heuristic search techniques to perform the selection. Our investi‐ gation and experiments demonstrate very promising results. Using these techni‐ ques can ensure better selection methods and datasets for Ensemble and Consensus Clustering and thus more efficient clustering results

An Overview of the Use of Neural Networks for Data Mining Tasks

In the recent years the area of data mining has experienced a considerable demand for technologies that extract knowledge from large and complex data sources. There is a substantial commercial interest as well as research investigations in the area that aim to develop new and improved approaches for extracting information, relationships, and patterns from datasets. Artificial Neural Networks (NN) are popular biologically inspired intelligent methodologies, whose classification, prediction and pattern recognition capabilities have been utilised successfully in many areas, including science, engineering, medicine, business, banking, telecommunication, and many other fields. This paper highlights from a data mining perspective the implementation of NN, using supervised and unsupervised learning, for pattern recognition, classification, prediction and cluster analysis, and focuses the discussion on their usage in bioinformatics and financial data analysis tasks

Multi-tier framework for the inferential measurement and data-driven modeling

A framework for the inferential measurement and data-driven modeling has been proposed and assessed in several real-world application domains. The architecture of the framework has been structured in multiple tiers to facilitate extensibility and the integration of new components. Each of the proposed four tiers has been assessed in an uncoupled way to verify their suitability. The first tier, dealing with exploratory data analysis, has been assessed with the characterization of the chemical space related to the biodegradation of organic chemicals. This analysis has established relationships between physicochemical variables and biodegradation rates that have been used for model development. At the preprocessing level, a novel method for feature selection based on dissimilarity measures between Self-Organizing maps (SOM) has been developed and assessed. The proposed method selected more features than others published in literature but leads to models with improved predictive power. Single and multiple data imputation techniques based on the SOM have also been used to recover missing data in a Waste Water Treatment Plant benchmark. A new dynamic method to adjust the centers and widths of in Radial basis Function networks has been proposed to predict water quality. The proposed method outperformed other neural networks. The proposed modeling components have also been assessed in the development of prediction and classification models for biodegradation rates in different media. The results obtained proved the suitability of this approach to develop data-driven models when the complex dynamics of the process prevents the formulation of mechanistic models. The use of rule generation algorithms and Bayesian dependency models has been preliminary screened to provide the framework with interpretation capabilities. Preliminary results obtained from the classification of Modes of Toxic Action (MOA) indicate that this could be a promising approach to use MOAs as proxy indicators of human health effects of chemicals.Finally, the complete framework has been applied to three different modeling scenarios. A virtual sensor system, capable of inferring product quality indices from primary process variables has been developed and assessed. The system was integrated with the control system in a real chemical plant outperforming multi-linear correlation models usually adopted by chemical manufacturers. A model to predict carcinogenicity from molecular structure for a set of aromatic compounds has been developed and tested. Results obtained after the application of the SOM-dissimilarity feature selection method yielded better results than models published in the literature. Finally, the framework has been used to facilitate a new approach for environmental modeling and risk management within geographical information systems (GIS). The SOM has been successfully used to characterize exposure scenarios and to provide estimations of missing data through geographic interpolation. The combination of SOM and Gaussian Mixture models facilitated the formulation of a new probabilistic risk assessment approach.Aquesta tesi proposa i avalua en diverses aplicacions reals, un marc general de treball per al desenvolupament de sistemes de mesurament inferencial i de modelat basats en dades. L'arquitectura d'aquest marc de treball s'organitza en diverses capes que faciliten la seva extensibilitat així com la integració de nous components. Cadascun dels quatre nivells en que s'estructura la proposta de marc de treball ha estat avaluat de forma independent per a verificar la seva funcionalitat. El primer que nivell s'ocupa de l'anàlisi exploratòria de dades ha esta avaluat a partir de la caracterització de l'espai químic corresponent a la biodegradació de certs compostos orgànics. Fruit d'aquest anàlisi s'han establert relacions entre diverses variables físico-químiques que han estat emprades posteriorment per al desenvolupament de models de biodegradació. A nivell del preprocés de les dades s'ha desenvolupat i avaluat una nova metodologia per a la selecció de variables basada en l'ús del Mapes Autoorganitzats (SOM). Tot i que el mètode proposat selecciona, en general, un major nombre de variables que altres mètodes proposats a la literatura, els models resultants mostren una millor capacitat predictiva. S'han avaluat també tot un conjunt de tècniques d'imputació de dades basades en el SOM amb un conjunt de dades estàndard corresponent als paràmetres d'operació d'una planta de tractament d'aigües residuals. Es proposa i avalua en un problema de predicció de qualitat en aigua un nou model dinàmic per a ajustar el centre i la dispersió en xarxes de funcions de base radial. El mètode proposat millora els resultats obtinguts amb altres arquitectures neuronals. Els components de modelat proposat s'han aplicat també al desenvolupament de models predictius i de classificació de les velocitats de biodegradació de compostos orgànics en diferents medis. Els resultats obtinguts demostren la viabilitat d'aquesta aproximació per a desenvolupar models basats en dades en aquells casos en els que la complexitat de dinàmica del procés impedeix formular models mecanicistes. S'ha dut a terme un estudi preliminar de l'ús de algorismes de generació de regles i de grafs de dependència bayesiana per a introduir una nova capa que faciliti la interpretació dels models. Els resultats preliminars obtinguts a partir de la classificació dels Modes d'acció Tòxica (MOA) apunten a que l'ús dels MOA com a indicadors intermediaris dels efectes dels compostos químics en la salut és una aproximació factible.Finalment, el marc de treball proposat s'ha aplicat en tres escenaris de modelat diferents. En primer lloc, s'ha desenvolupat i avaluat un sensor virtual capaç d'inferir índexs de qualitat a partir de variables primàries de procés. El sensor resultant ha estat implementat en una planta química real millorant els resultats de les correlacions multilineals emprades habitualment. S'ha desenvolupat i avaluat un model per a predir els efectes carcinògens d'un grup de compostos aromàtics a partir de la seva estructura molecular. Els resultats obtinguts desprès d'aplicar el mètode de selecció de variables basat en el SOM milloren els resultats prèviament publicats. Aquest marc de treball s'ha usat també per a proporcionar una nova aproximació al modelat ambiental i l'anàlisi de risc amb sistemes d'informació geogràfica (GIS). S'ha usat el SOM per a caracteritzar escenaris d'exposició i per a desenvolupar un nou mètode d'interpolació geogràfica. La combinació del SOM amb els models de mescla de gaussianes dona una nova formulació al problema de l'anàlisi de risc des d'un punt de vista probabilístic

Application of advanced machine learning techniques to early network traffic classification

The fast-paced evolution of the Internet is drawing a complex context which imposes demanding requirements to assure end-to-end Quality of Service. The development of advanced intelligent approaches in networking is envisioning features that include autonomous resource allocation, fast reaction against unexpected network events and so on. Internet Network Traffic Classification constitutes a crucial source of information for Network Management, being decisive in assisting the emerging network control paradigms. Monitoring traffic flowing through network devices support tasks such as: network orchestration, traffic prioritization, network arbitration and cyberthreats detection, amongst others. The traditional traffic classifiers became obsolete owing to the rapid Internet evolution. Port-based classifiers suffer from significant accuracy losses due to port masking, meanwhile Deep Packet Inspection approaches have severe user-privacy limitations. The advent of Machine Learning has propelled the application of advanced algorithms in diverse research areas, and some learning approaches have proved as an interesting alternative to the classic traffic classification approaches. Addressing Network Traffic Classification from a Machine Learning perspective implies numerous challenges demanding research efforts to achieve feasible classifiers. In this dissertation, we endeavor to formulate and solve important research questions in Machine-Learning-based Network Traffic Classification. As a result of numerous experiments, the knowledge provided in this research constitutes an engaging case of study in which network traffic data from two different environments are successfully collected, processed and modeled. Firstly, we approached the Feature Extraction and Selection processes providing our own contributions. A Feature Extractor was designed to create Machine-Learning ready datasets from real traffic data, and a Feature Selection Filter based on fast correlation is proposed and tested in several classification datasets. Then, the original Network Traffic Classification datasets are reduced using our Selection Filter to provide efficient classification models. Many classification models based on CART Decision Trees were analyzed exhibiting excellent outcomes in identifying various Internet applications. The experiments presented in this research comprise a comparison amongst ensemble learning schemes, an exploratory study on Class Imbalance and solutions; and an analysis of IP-header predictors for early traffic classification. This thesis is presented in the form of compendium of JCR-indexed scientific manuscripts and, furthermore, one conference paper is included. In the present work we study a wide number of learning approaches employing the most advance methodology in Machine Learning. As a result, we identify the strengths and weaknesses of these algorithms, providing our own solutions to overcome the observed limitations. Shortly, this thesis proves that Machine Learning offers interesting advanced techniques that open prominent prospects in Internet Network Traffic Classification.Departamento de Teoría de la Señal y Comunicaciones e Ingeniería TelemáticaDoctorado en Tecnologías de la Información y las Telecomunicacione

Survey of data mining approaches to user modeling for adaptive hypermedia

The ability of an adaptive hypermedia system to create tailored environments depends mainly on the amount and accuracy of information stored in each user model. Some of the difficulties that user modeling faces are the amount of data available to create user models, the adequacy of the data, the noise within that data, and the necessity of capturing the imprecise nature of human behavior. Data mining and machine learning techniques have the ability to handle large amounts of data and to process uncertainty. These characteristics make these techniques suitable for automatic generation of user models that simulate human decision making. This paper surveys different data mining techniques that can be used to efficiently and accurately capture user behavior. The paper also presents guidelines that show which techniques may be used more efficiently according to the task implemented by the applicatio

Neuron Clustering for Mitigating Catastrophic Forgetting in Supervised and Reinforcement Learning

Neural networks have had many great successes in recent years, particularly with the advent of deep learning and many novel training techniques. One issue that has affected neural networks and prevented them from performing well in more realistic online environments is that of catastrophic forgetting. Catastrophic forgetting affects supervised learning systems when input samples are temporally correlated or are non-stationary. However, most real-world problems are non-stationary in nature, resulting in prolonged periods of time separating inputs drawn from different regions of the input space. Reinforcement learning represents a worst-case scenario when it comes to precipitating catastrophic forgetting in neural networks. Meaningful training examples are acquired as the agent explores different regions of its state/action space. When the agent is in one such region, only highly correlated samples from that region are typically acquired. Moreover, the regions that the agent is likely to visit will depend on its current policy, suggesting that an agent that has a good policy may avoid exploring particular regions. The confluence of these factors means that without some mitigation techniques, supervised neural networks as function approximation in temporal-difference learning will be restricted to the simplest test cases. This work explores catastrophic forgetting in neural networks in terms of supervised and reinforcement learning. A simple mathematical model is introduced to argue that catastrophic forgetting is a result of overlapping representations in the hidden layers in which updates to the weights can affect multiple unrelated regions of the input space. A novel neural network architecture, dubbed cluster-select, is introduced which utilizes online clustering for the selection of a subset of hidden neurons to be activated in the feedforward and backpropagation stages. Clusterselect is demonstrated to outperform leading techniques in both classification nd regression. In the context of reinforcement learning, cluster-select is studied for both fully and partially observable Markov decision processes and is demonstrated to converge faster and behave in a more stable manner when compared to other state-of-the-art algorithms