14,875 research outputs found
Reductions for Frequency-Based Data Mining Problems
Studying the computational complexity of problems is one of the - if not the
- fundamental questions in computer science. Yet, surprisingly little is known
about the computational complexity of many central problems in data mining. In
this paper we study frequency-based problems and propose a new type of
reduction that allows us to compare the complexities of the maximal frequent
pattern mining problems in different domains (e.g. graphs or sequences). Our
results extend those of Kimelfeld and Kolaitis [ACM TODS, 2014] to a broader
range of data mining problems. Our results show that, by allowing constraints
in the pattern space, the complexities of many maximal frequent pattern mining
problems collapse. These problems include maximal frequent subgraphs in
labelled graphs, maximal frequent itemsets, and maximal frequent subsequences
with no repetitions. In addition to theoretical interest, our results might
yield more efficient algorithms for the studied problems.Comment: This is an extended version of a paper of the same title to appear in
the Proceedings of the 17th IEEE International Conference on Data Mining
(ICDM'17
DESQ: Frequent Sequence Mining with Subsequence Constraints
Frequent sequence mining methods often make use of constraints to control
which subsequences should be mined. A variety of such subsequence constraints
has been studied in the literature, including length, gap, span,
regular-expression, and hierarchy constraints. In this paper, we show that many
subsequence constraints---including and beyond those considered in the
literature---can be unified in a single framework. A unified treatment allows
researchers to study jointly many types of subsequence constraints (instead of
each one individually) and helps to improve usability of pattern mining systems
for practitioners. In more detail, we propose a set of simple and intuitive
"pattern expressions" to describe subsequence constraints and explore
algorithms for efficiently mining frequent subsequences under such general
constraints. Our algorithms translate pattern expressions to compressed finite
state transducers, which we use as computational model, and simulate these
transducers in a way suitable for frequent sequence mining. Our experimental
study on real-world datasets indicates that our algorithms---although more
general---are competitive to existing state-of-the-art algorithms.Comment: Long version of the paper accepted at the IEEE ICDM 2016 conferenc
A Survey on Metric Learning for Feature Vectors and Structured Data
The need for appropriate ways to measure the distance or similarity between
data is ubiquitous in machine learning, pattern recognition and data mining,
but handcrafting such good metrics for specific problems is generally
difficult. This has led to the emergence of metric learning, which aims at
automatically learning a metric from data and has attracted a lot of interest
in machine learning and related fields for the past ten years. This survey
paper proposes a systematic review of the metric learning literature,
highlighting the pros and cons of each approach. We pay particular attention to
Mahalanobis distance metric learning, a well-studied and successful framework,
but additionally present a wide range of methods that have recently emerged as
powerful alternatives, including nonlinear metric learning, similarity learning
and local metric learning. Recent trends and extensions, such as
semi-supervised metric learning, metric learning for histogram data and the
derivation of generalization guarantees, are also covered. Finally, this survey
addresses metric learning for structured data, in particular edit distance
learning, and attempts to give an overview of the remaining challenges in
metric learning for the years to come.Comment: Technical report, 59 pages. Changes in v2: fixed typos and improved
presentation. Changes in v3: fixed typos. Changes in v4: fixed typos and new
method
Towards trajectory anonymization: a generalization-based approach
Trajectory datasets are becoming popular due to the massive usage of GPS and locationbased services. In this paper, we address privacy issues regarding the identification of individuals in static trajectory datasets. We first adopt the notion of k-anonymity to trajectories and propose a novel generalization-based approach for anonymization of trajectories. We further show that releasing
anonymized trajectories may still have some privacy leaks. Therefore we propose a randomization based reconstruction algorithm for releasing anonymized trajectory data and also present how the underlying techniques can be adapted to other anonymity standards. The experimental results on real and synthetic trajectory datasets show the effectiveness of the proposed techniques
Improving average ranking precision in user searches for biomedical research datasets
Availability of research datasets is keystone for health and life science
study reproducibility and scientific progress. Due to the heterogeneity and
complexity of these data, a main challenge to be overcome by research data
management systems is to provide users with the best answers for their search
queries. In the context of the 2016 bioCADDIE Dataset Retrieval Challenge, we
investigate a novel ranking pipeline to improve the search of datasets used in
biomedical experiments. Our system comprises a query expansion model based on
word embeddings, a similarity measure algorithm that takes into consideration
the relevance of the query terms, and a dataset categorisation method that
boosts the rank of datasets matching query constraints. The system was
evaluated using a corpus with 800k datasets and 21 annotated user queries. Our
system provides competitive results when compared to the other challenge
participants. In the official run, it achieved the highest infAP among the
participants, being +22.3% higher than the median infAP of the participant's
best submissions. Overall, it is ranked at top 2 if an aggregated metric using
the best official measures per participant is considered. The query expansion
method showed positive impact on the system's performance increasing our
baseline up to +5.0% and +3.4% for the infAP and infNDCG metrics, respectively.
Our similarity measure algorithm seems to be robust, in particular compared to
Divergence From Randomness framework, having smaller performance variations
under different training conditions. Finally, the result categorization did not
have significant impact on the system's performance. We believe that our
solution could be used to enhance biomedical dataset management systems. In
particular, the use of data driven query expansion methods could be an
alternative to the complexity of biomedical terminologies
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