Are coarse-grained overlays ready for general purpose application acceleration on FPGAs?

Combining processors with hardware accelerators has become a norm with systems-on-chip (SoCs) ever present in modern compute devices. Heterogeneous programmable system on chip platforms sometimes referred to as hybrid FPGAs, tightly couple general purpose processors with high performance reconfigurable fabrics, providing a more flexible alternative. We can now think of a software application with hardware accelerated portions that are reconfigured at runtime. While such ideas have been explored in the past, modern hybrid FPGAs are the first commercial platforms to enable this move to a more software oriented view, where reconfiguration enables hardware resources to be shared by multiple tasks in a bigger application. However, while the rapidly increasing logic density and more capable hard resources found in modern hybrid FPGA devices should make them widely deployable, they remain constrained within specialist application domains. This is due to both design productivity issues and a lack of suitable hardware abstraction to eliminate the need for working with platform-specific details, as server and desktop virtualization has done in a more general sense. To allow mainstream adoption of FPGA based accelerators in general purpose computing, there is a need to virtualize FPGAs and make them more accessible to application developers who are accustomed to software API abstractions and fast development cycles. In this paper, we discuss the role of overlay architectures in enabling general purpose FPGA application acceleration

Automatic Nested Loop Acceleration on FPGAs Using Soft CGRA Overlay

Session 1: HLS Toolingpostprin

A Hybrid Partially Reconfigurable Overlay Supporting Just-In-Time Assembly of Custom Accelerators on FPGAs

The state of the art in design and development flows for FPGAs are not sufficiently mature to allow programmers to implement their applications through traditional software development flows. The stipulation of synthesis as well as the requirement of background knowledge on the FPGAs\u27 low-level physical hardware structure are major challenges that prevent programmers from using FPGAs. The reconfigurable computing community is seeking solutions to raise the level of design abstraction at which programmers must operate, and move the synthesis process out of the programmers\u27 path through the use of overlays. A recent approach, Just-In-Time Assembly (JITA), was proposed that enables hardware accelerators to be assembled at runtime, all from within a traditional software compilation flow. The JITA approach presents a promising path to constructing hardware designs on FPGAs using pre-synthesized parallel programming patterns, but suffers from two major limitations. First, all variant programming patterns must be pre-synthesized. Second, conditional operations are not supported. In this thesis, I present a new reconfigurable overlay, URUK, that overcomes the two limitations imposed by the JITA approach. Similar to the original JITA approach, the proposed URUK overlay allows hardware accelerators to be constructed on FPGAs through software compilation flows. To this basic capability, URUK adds additional support to enable the assembly of presynthesized fine-grained computational operators to be assembled within the FPGA. This thesis provides analysis of URUK from three different perspectives; utilization, performance, and productivity. The analysis includes comparisons against High-Level Synthesis (HLS) and the state of the art approach to creating static overlays. The tradeoffs conclude that URUK can achieve approximately equivalent performance for algebra operations compared to HLS custom accelerators, which are designed with simple experience on FPGAs. Further, URUK shows a high degree of flexibility for runtime placement and routing of the primitive operations. The analysis shows how this flexibility can be leveraged to reduce communication overhead among tiles, compared to traditional static overlays. The results also show URUK can enable software programmers without any hardware skills to create hardware accelerators at productivity levels consistent with software development and compilation

Lightweight programmable DSP block overlay for streaming neural network acceleration

Implementations of hardware accelerators for neu- ral networks are increasingly popular on FPGAs, due to flex- ibility, achievable performance and efficiency gains resulting from network optimisations. The long compilation time required by the backend toolflow, however, makes rapid deployment and prototyping of such accelerators on FPGAs more difficult. Moreover, achieving high frequency of operation requires sig- nificant low-level design effort. We present a neural network overlay for FPGAs that exploits DSP blocks, operating at near their theoretical maximum frequency, while minimizing resource utilization. The proposed architecture is flexible, enabling rapid runtime configuration of network parameters according to the desired network topology. It is tailored for lightweight edge implementations requiring acceleration, rather than the highest throughput achieved by more complex architectures in the datacenter

Just In Time Assembly (JITA) - A Run Time Interpretation Approach for Achieving Productivity of Creating Custom Accelerators in FPGAs

The reconfigurable computing community has yet to be successful in allowing programmers to access FPGAs through traditional software development flows. Existing barriers that prevent programmers from using FPGAs include: 1) knowledge of hardware programming models, 2) the need to work within the vendor specific CAD tools and hardware synthesis. This thesis presents a series of published papers that explore different aspects of a new approach being developed to remove the barriers and enable programmers to compile accelerators on next generation reconfigurable manycore architectures. The approach is entitled Just In Time Assembly (JITA) of hardware accelerators. The approach has been defined to allow hardware accelerators to be built and run through software compilation and run time interpretation outside of CAD tools and without requiring each new accelerator to be synthesized. The approach advocates the use of libraries of pre-synthesized components that can be referenced through symbolic links in a similar fashion to dynamically linked software libraries. Synthesis still must occur but is moved out of the application programmers software flow and into the initial coding process that occurs when programming patterns that define a Domain Specific Language (DSL) are first coded. Programmers see no difference between creating software or hardware functionality when using the DSL. A new run time interpreter is introduced to assemble the individual pre-synthesized hardware accelerators that comprise the accelerator functionality within a configurable tile array of partially reconfigurable slots at run time. Quantitative results are presented that compares utilization, performance, and productivity of the approach to what would be achieved by full custom accelerators created through traditional CAD flows using hardware programming models and passing through synthesis

FPGA dynamic and partial reconfiguration : a survey of architectures, methods, and applications

Dynamic and partial reconfiguration are key differentiating capabilities of field programmable gate arrays (FPGAs). While they have been studied extensively in academic literature, they find limited use in deployed systems. We review FPGA reconfiguration, looking at architectures built for the purpose, and the properties of modern commercial architectures. We then investigate design flows, and identify the key challenges in making reconfigurable FPGA systems easier to design. Finally, we look at applications where reconfiguration has found use, as well as proposing new areas where this capability places FPGAs in a unique position for adoption

A study of systems implementation languages for the POCCNET system

The results are presented of a study of systems implementation languages for the Payload Operations Control Center Network (POCCNET). Criteria are developed for evaluating the languages, and fifteen existing languages are evaluated on the basis of these criteria

FPGA acceleration of DNA sequence alignment: design analysis and optimization

Existing FPGA accelerators for short read mapping often fail to utilize the complete biological information in sequencing data for simple hardware design, leading to missed or incorrect alignment. In this work, we propose a runtime reconfigurable alignment pipeline that considers all information in sequencing data for the biologically accurate acceleration of short read mapping. We focus our efforts on accelerating two string matching techniques: FM-index and the Smith-Waterman algorithm with the affine-gap model which are commonly used in short read mapping. We further optimize the FPGA hardware using a design analyzer and merger to improve alignment performance. The contributions of this work are as follows. 1. We accelerate the exact-match and mismatch alignment by leveraging the FM-index technique. We optimize memory access by compressing the data structure and interleaving the access with multiple short reads. The FM-index hardware also considers complete information in the read data to maximize accuracy. 2. We propose a seed-and-extend model to accelerate alignment with indels. The FM-index hardware is extended to support the seeding stage while a Smith-Waterman implementation with the affine-gap model is developed on FPGA for the extension stage. This model can improve the efficiency of indel alignment with comparable accuracy versus state-of-the-art software. 3. We present an approach for merging multiple FPGA designs into a single hardware design, so that multiple place-and-route tasks can be replaced by a single task to speed up functional evaluation of designs. We first experiment with this approach to demonstrate its feasibility for different designs. Then we apply this approach to optimize one of the proposed FPGA aligners for better alignment performance.Open Acces