ECG Signal Analysis: Enhancement and R-Peak Detection

The project has been inspired by the need to find an efficient method for ECG Signal Analysis which is simple and has good accuracy and less computation time. The initial task for efficient analysis is the removal of noise. It actually involves the extraction of the required cardiac components by rejecting the background noise. Enhancement of signal is achieved by the use of Empirical Mode Decomposition method. The use of EMD was inspired by its adaptive nature. The second task is that of R peak detection which is achieved by the use of Continuous Wavelet Transform. Efficiency of the method is measured in terms of detection error rate. Various other methods of R peak detection like Hilbert Transform and Difference Operation Method are implemented and the results when compared with the Continuous Wavelet Transform prove that CWT is a better method. The simulation is done in MATLAB environment. The experiments are carried out on MIT-BIH database. The results show that our proposed method is very effective and an efficient method for fast computation of R peak detection

A robust ECG denoising technique using variable frequency complex demodulation

Background and Objective Electrocardiogram (ECG) is widely used for the detection and diagnosis of cardiac arrhythmias such as atrial fibrillation. Most of the computer-based automatic cardiac abnormality detection algorithms require accurate identification of ECG components such as QRS complexes in order to provide a reliable result. However, ECGs are often contaminated by noise and artifacts, especially if they are obtained using wearable sensors, therefore, identification of accurate QRS complexes often becomes challenging. Most of the existing denoising methods were validated using simulated noise added to a clean ECG signal and they did not consider authentically noisy ECG signals. Moreover, many of them are model-dependent and sampling-frequency dependent and require a large amount of computational time. Methods This paper presents a novel ECG denoising technique using the variable frequency complex demodulation (VFCDM) algorithm, which considers noises from a variety of sources. We used the sub-band decomposition of the noise-contaminated ECG signals using VFCDM to remove the noise components so that better-quality ECGs could be reconstructed. An adaptive automated masking is proposed in order to preserve the QRS complexes while removing the unnecessary noise components. Finally, the ECG was reconstructed using a dynamic reconstruction rule based on automatic identification of the severity of the noise contamination. The ECG signal quality was further improved by removing baseline drift and smoothing via adaptive mean filtering. Results Evaluation results on the standard MIT-BIH Arrhythmia database suggest that the proposed denoising technique provides superior denoising performance compared to studies in the literature. Moreover, the proposed method was validated using real-life noise sources collected from the noise stress test database (NSTDB) and data from an armband ECG device which contains significant muscle artifacts. Results from both the wearable armband ECG data and NSTDB data suggest that the proposed denoising method provides significantly better performance in terms of accurate QRS complex detection and signal to noise ratio (SNR) improvement when compared to some of the recent existing denoising algorithms. Conclusions The detailed qualitative and quantitative analysis demonstrated that the proposed denoising method has been robust in filtering varieties of noises present in the ECG. The QRS detection performance of the denoised armband ECG signals indicates that the proposed denoising method has the potential to increase the amount of usable armband ECG data, thus, the armband device with the proposed denoising method could be used for long term monitoring of atrial fibrillation

Using the redundant convolutional encoder–decoder to denoise QRS complexes in ECG signals recorded with an armband wearable device

Long-term electrocardiogram (ECG) recordings while performing normal daily routines are often corrupted with motion artifacts, which in turn, can result in the incorrect calculation of heart rates. Heart rates are important clinical information, as they can be used for analysis of heart-rate variability and detection of cardiac arrhythmias. In this study, we present an algorithm for denoising ECG signals acquired with a wearable armband device. The armband was worn on the upper left arm by one male participant, and we simultaneously recorded three ECG channels for 24 h. We extracted 10-s sequences from armband recordings corrupted with added noise and motion artifacts. Denoising was performed using the redundant convolutional encoder–decoder (R-CED), a fully convolutional network. We measured the performance by detecting R-peaks in clean, noisy, and denoised sequences and by calculating signal quality indices: signal-to-noise ratio (SNR), ratio of power, and cross-correlation with respect to the clean sequences. The percent of correctly detected R-peaks in denoised sequences was higher than in sequences corrupted with either added noise (70–100% vs. 34–97%) or motion artifacts (91.86% vs. 61.16%). There was notable improvement in SNR values after denoising for signals with noise added (7–19 dB), and when sequences were corrupted with motion artifacts (0.39 dB). The ratio of power for noisy sequences was significantly lower when compared to both clean and denoised sequences. Similarly, cross-correlation between noisy and clean sequences was significantly lower than between denoised and clean sequences. Moreover, we tested our denoising algorithm on 60-s sequences extracted from recordings from the Massachusetts Institute of Technology-Beth Israel Hospital (MIT-BIH) arrhythmia database and obtained improvement in SNR values of 7.08 ± 0.25 dB (mean ± standard deviation (sd)). These results from a diverse set of data suggest that the proposed denoising algorithm improves the quality of the signal and can potentially be applied to most ECG measurement devices

Signal Processing Methods for Heart Rate Detection Using the Seismocardiogram

Cardiac diseases are one of the major causes of death. Heart monitoring/diagnostic techniques have been developed over decades to address this concern. Monitoring a vital sign such as heart rate is a powerful technique for heart abnormalities detection (e.g., arrhythmia). The novelty of this work is that offers new heart rate detection methods which are both robust and adaptive compared to existing heart rate detec- tion methods. Utilized data sets in this research have been provided from two sources of PhysioNet and a research group. In this work, utilized methods for heart rate detection include Signal Energy Thresholding (SET), Empirical Mode Decomposition (EMD) and Empirical Wavelet Transform (EWT). To the best of the author’s knowledge, this work is the first to use EMD and EWT for heart rate detection from Seismocardiogram (SCG) signal. Obtained result from applying SET to ECG signal is selected as our ground truth. Then, all three methods are used for heart rate detection from the SCG signal. The average error of SET method, EWT and EMD respectively 13.9 ms, 13.8 ms and 16 ms. Based on the obtained results, EMD and EWT are promising techniques for heart rate detection and interpretation from the SCG signal. Another contribution of this work is arrhythmia detection using EWT. EWT provides us with the instantaneous frequency changes of the corresponding modes to ECG signal. Based on the estimated power spectral density of each mode, power spectral density of arrhythmia affected ECG is higher (≥ 50dB) compared to the power spectral density of a normal ECG (≤ 20dB). This provides the potential for arrhythmia detection using EWT

Automatic analysis and classification of cardiac acoustic signals for long term monitoring

Objective: Cardiovascular diseases are the leading cause of death worldwide resulting in over 17.9 million deaths each year. Most of these diseases are preventable and treatable, but their progression and outcomes are significantly more positive with early-stage diagnosis and proper disease management. Among the approaches available to assist with the task of early-stage diagnosis and management of cardiac conditions, automatic analysis of auscultatory recordings is one of the most promising ones, since it could be particularly suitable for ambulatory/wearable monitoring. Thus, proper investigation of abnormalities present in cardiac acoustic signals can provide vital clinical information to assist long term monitoring. Cardiac acoustic signals, however, are very susceptible to noise and artifacts, and their characteristics vary largely with the recording conditions which makes the analysis challenging. Additionally, there are challenges in the steps used for automatic analysis and classification of cardiac acoustic signals. Broadly, these steps are the segmentation, feature extraction and subsequent classification of recorded signals using selected features. This thesis presents approaches using novel features with the aim to assist the automatic early-stage detection of cardiovascular diseases with improved performance, using cardiac acoustic signals collected in real-world conditions. Methods: Cardiac auscultatory recordings were studied to identify potential features to help in the classification of recordings from subjects with and without cardiac diseases. The diseases considered in this study for the identification of the symptoms and characteristics are the valvular heart diseases due to stenosis and regurgitation, atrial fibrillation, and splitting of fundamental heart sounds leading to additional lub/dub sounds in the systole or diastole interval of a cardiac cycle. The localisation of cardiac sounds of interest was performed using an adaptive wavelet-based filtering in combination with the Shannon energy envelope and prior information of fundamental heart sounds. This is a prerequisite step for the feature extraction and subsequent classification of recordings, leading to a more precise diagnosis. Localised segments of S1 and S2 sounds, and artifacts, were used to extract a set of perceptual and statistical features using wavelet transform, homomorphic filtering, Hilbert transform and mel-scale filtering, which were then fed to train an ensemble classifier to interpret S1 and S2 sounds. Once sound peaks of interest were identified, features extracted from these peaks, together with the features used for the identification of S1 and S2 sounds, were used to develop an algorithm to classify recorded signals. Overall, 99 features were extracted and statistically analysed using neighborhood component analysis (NCA) to identify the features which showed the greatest ability in classifying recordings. Selected features were then fed to train an ensemble classifier to classify abnormal recordings, and hyperparameters were optimized to evaluate the performance of the trained classifier. Thus, a machine learning-based approach for the automatic identification and classification of S1 and S2, and normal and abnormal recordings, in real-world noisy recordings using a novel feature set is presented. The validity of the proposed algorithm was tested using acoustic signals recorded in real-world, non-controlled environments at four auscultation sites (aortic valve, tricuspid valve, mitral valve, and pulmonary valve), from the subjects with and without cardiac diseases; together with recordings from the three large public databases. The performance metrics of the methodology in relation to classification accuracy (CA), sensitivity (SE), precision (P+), and F1 score, were evaluated. Results: This thesis proposes four different algorithms to automatically classify fundamental heart sounds – S1 and S2; normal fundamental sounds and abnormal additional lub/dub sounds recordings; normal and abnormal recordings; and recordings with heart valve disorders, namely the mitral stenosis (MS), mitral regurgitation (MR), mitral valve prolapse (MVP), aortic stenosis (AS) and murmurs, using cardiac acoustic signals. The results obtained from these algorithms were as follows: • The algorithm to classify S1 and S2 sounds achieved an average SE of 91.59% and 89.78%, and F1 score of 90.65% and 89.42%, in classifying S1 and S2, respectively. 87 features were extracted and statistically studied to identify the top 14 features which showed the best capabilities in classifying S1 and S2, and artifacts. The analysis showed that the most relevant features were those extracted using Maximum Overlap Discrete Wavelet Transform (MODWT) and Hilbert transform. • The algorithm to classify normal fundamental heart sounds and abnormal additional lub/dub sounds in the systole or diastole intervals of a cardiac cycle, achieved an average SE of 89.15%, P+ of 89.71%, F1 of 89.41%, and CA of 95.11% using the test dataset from the PASCAL database. The top 10 features that achieved the highest weights in classifying these recordings were also identified. • Normal and abnormal classification of recordings using the proposed algorithm achieved a mean CA of 94.172%, and SE of 92.38%, in classifying recordings from the different databases. Among the top 10 acoustic features identified, the deterministic energy of the sound peaks of interest and the instantaneous frequency extracted using the Hilbert Huang-transform, achieved the highest weights. • The machine learning-based approach proposed to classify recordings of heart valve disorders (AS, MS, MR, and MVP) achieved an average CA of 98.26% and SE of 95.83%. 99 acoustic features were extracted and their abilities to differentiate these abnormalities were examined using weights obtained from the neighborhood component analysis (NCA). The top 10 features which showed the greatest abilities in classifying these abnormalities using recordings from the different databases were also identified. The achieved results demonstrate the ability of the algorithms to automatically identify and classify cardiac sounds. This work provides the basis for measurements of many useful clinical attributes of cardiac acoustic signals and can potentially help in monitoring the overall cardiac health for longer duration. The work presented in this thesis is the first-of-its-kind to validate the results using both, normal and pathological cardiac acoustic signals, recorded for a long continuous duration of 5 minutes at four different auscultation sites in non-controlled real-world conditions.Open Acces

Signal Processing Methods for Heart Rate Detection Using the Seismocardiogram

Cardiac diseases are one of the major causes of death. Heart monitoring/diagnostic techniques have been developed over decades to address this concern. Monitoring a vital sign such as heart rate is a powerful technique for heart abnormalities detection (e.g., arrhythmia). The novelty of this work is that offers new heart rate detection methods which are both robust and adaptive compared to existing heart rate detec- tion methods. Utilized data sets in this research have been provided from two sources of PhysioNet and a research group. In this work, utilized methods for heart rate detection include Signal Energy Thresholding (SET), Empirical Mode Decomposition (EMD) and Empirical Wavelet Transform (EWT). To the best of the author’s knowledge, this work is the first to use EMD and EWT for heart rate detection from Seismocardiogram (SCG) signal. Obtained result from applying SET to ECG signal is selected as our ground truth. Then, all three methods are used for heart rate detection from the SCG signal. The average error of SET method, EWT and EMD respectively 13.9 ms, 13.8 ms and 16 ms. Based on the obtained results, EMD and EWT are promising techniques for heart rate detection and interpretation from the SCG signal. Another contribution of this work is arrhythmia detection using EWT. EWT provides us with the instantaneous frequency changes of the corresponding modes to ECG signal. Based on the estimated power spectral density of each mode, power spectral density of arrhythmia affected ECG is higher (≥ 50dB) compared to the power spectral density of a normal ECG (≤ 20dB). This provides the potential for arrhythmia detection using EWT

Systems and methods for physiological signal enhancement and biometric extraction using non-invasive optical sensors

A system and method for signal processing to remove unwanted noise components including: (i) wavelength-independent motion artifacts such as tissue, bone and skin effects, and (ii) wavelength-dependent motion artifact/noise components such as venous blood pulsation and movement due to various sources including muscle pump, respiratory pump and physical perturbation. Disclosed are methods, analytics, and their uses for reliable perfusion monitoring, arterial oxygen saturation monitoring, heart rate monitoring during daily activities and in hospital settings and for extraction of physiological parameters such as respiration information, hemodynamic parameters, venous capacity, and fluid responsiveness. The system and methods disclosed are extendable to include monitoring platforms for perfusion, hypoxia, arrhythmia detection, airway obstruction detection and sleep disorders including apnea.Board of Regents, University of Texas Syste

Detection and Processing Techniques of FECG Signal for Fetal Monitoring

Fetal electrocardiogram (FECG) signal contains potentially precise information that could assist clinicians in making more appropriate and timely decisions during labor. The ultimate reason for the interest in FECG signal analysis is in clinical diagnosis and biomedical applications. The extraction and detection of the FECG signal from composite abdominal signals with powerful and advance methodologies are becoming very important requirements in fetal monitoring. The purpose of this review paper is to illustrate the various methodologies and developed algorithms on FECG signal detection and analysis to provide efficient and effective ways of understanding the FECG signal and its nature for fetal monitoring. A comparative study has been carried out to show the performance and accuracy of various methods of FECG signal analysis for fetal monitoring. Finally, this paper further focused some of the hardware implementations using electrical signals for monitoring the fetal heart rate. This paper opens up a passage for researchers, physicians, and end users to advocate an excellent understanding of FECG signal and its analysis procedures for fetal heart rate monitoring system