Image-based 3-D reconstruction of constrained environments

Nuclear power plays a important role to the United Kingdom electricity generation infrastructure, providing a reliable baseload of low carbon electricity. The Advanced Gas-cooled Reactor (AGR) design makes up approximately 50% of the existing fleet, however, many of the operating reactors have exceeding their original design lifetimes.To ensure safe reactor operation, engineers perform periodic in-core visual inspections of reactor components to monitor the structural health of the core as it ages. However, current inspection mechanisms deployed provide limited structural information about the fuel channel or defects.;This thesis investigates the suitability of image-based 3-D reconstruction techniques to acquire 3-D structural geometry to enable improved diagnostic and prognostic abilities for inspection engineers. The application of image-based 3-D reconstruction to in-core inspection footage highlights significant challenges, most predominantly that the image saliency proves insuffcient for general reconstruction frameworks. The contribution of the thesis is threefold. Firstly, a novel semi-dense matching scheme which exploits sparse and dense image correspondence in combination with a novel intra-image region strength approach to improve the stability of the correspondence between images.;This results in a percentage increase of 138.53% of correct feature matches over similar state-of-the-art image matching paradigms. Secondly, a bespoke incremental Structure-from-Motion (SfM) framework called the Constrained Homogeneous SfM (CH-SfM) which is able to derive structure from deficient feature spaces and constrained environments. Thirdly, the application of the CH-SfM framework to remote visual inspection footage gathered within AGR fuel channels, outperforming other state-of-the-art reconstruction approaches and extracting representative 3-D structural geometry of orientational scans and fully circumferential reconstructions.;This is demonstrated on in-core and laboratory footage, achieving an approximate 3-D point density of 2.785 - 23.8025NX/cm² for real in-core inspection footage and high quality laboratory footage respectively. The demonstrated novelties have applicability to other constrained or feature-poor environments, with future work looking to producing fully dense, photo-realistic 3-D reconstructions.Nuclear power plays a important role to the United Kingdom electricity generation infrastructure, providing a reliable baseload of low carbon electricity. The Advanced Gas-cooled Reactor (AGR) design makes up approximately 50% of the existing fleet, however, many of the operating reactors have exceeding their original design lifetimes.To ensure safe reactor operation, engineers perform periodic in-core visual inspections of reactor components to monitor the structural health of the core as it ages. However, current inspection mechanisms deployed provide limited structural information about the fuel channel or defects.;This thesis investigates the suitability of image-based 3-D reconstruction techniques to acquire 3-D structural geometry to enable improved diagnostic and prognostic abilities for inspection engineers. The application of image-based 3-D reconstruction to in-core inspection footage highlights significant challenges, most predominantly that the image saliency proves insuffcient for general reconstruction frameworks. The contribution of the thesis is threefold. Firstly, a novel semi-dense matching scheme which exploits sparse and dense image correspondence in combination with a novel intra-image region strength approach to improve the stability of the correspondence between images.;This results in a percentage increase of 138.53% of correct feature matches over similar state-of-the-art image matching paradigms. Secondly, a bespoke incremental Structure-from-Motion (SfM) framework called the Constrained Homogeneous SfM (CH-SfM) which is able to derive structure from deficient feature spaces and constrained environments. Thirdly, the application of the CH-SfM framework to remote visual inspection footage gathered within AGR fuel channels, outperforming other state-of-the-art reconstruction approaches and extracting representative 3-D structural geometry of orientational scans and fully circumferential reconstructions.;This is demonstrated on in-core and laboratory footage, achieving an approximate 3-D point density of 2.785 - 23.8025NX/cm² for real in-core inspection footage and high quality laboratory footage respectively. The demonstrated novelties have applicability to other constrained or feature-poor environments, with future work looking to producing fully dense, photo-realistic 3-D reconstructions

Visual Perception For Robotic Spatial Understanding

Humans understand the world through vision without much effort. We perceive the structure, objects, and people in the environment and pay little direct attention to most of it, until it becomes useful. Intelligent systems, especially mobile robots, have no such biologically engineered vision mechanism to take for granted. In contrast, we must devise algorithmic methods of taking raw sensor data and converting it to something useful very quickly. Vision is such a necessary part of building a robot or any intelligent system that is meant to interact with the world that it is somewhat surprising we don\u27t have off-the-shelf libraries for this capability. Why is this? The simple answer is that the problem is extremely difficult. There has been progress, but the current state of the art is impressive and depressing at the same time. We now have neural networks that can recognize many objects in 2D images, in some cases performing better than a human. Some algorithms can also provide bounding boxes or pixel-level masks to localize the object. We have visual odometry and mapping algorithms that can build reasonably detailed maps over long distances with the right hardware and conditions. On the other hand, we have robots with many sensors and no efficient way to compute their relative extrinsic poses for integrating the data in a single frame. The same networks that produce good object segmentations and labels in a controlled benchmark still miss obvious objects in the real world and have no mechanism for learning on the fly while the robot is exploring. Finally, while we can detect pose for very specific objects, we don\u27t yet have a mechanism that detects pose that generalizes well over categories or that can describe new objects efficiently. We contribute algorithms in four of the areas mentioned above. First, we describe a practical and effective system for calibrating many sensors on a robot with up to 3 different modalities. Second, we present our approach to visual odometry and mapping that exploits the unique capabilities of RGB-D sensors to efficiently build detailed representations of an environment. Third, we describe a 3-D over-segmentation technique that utilizes the models and ego-motion output in the previous step to generate temporally consistent segmentations with camera motion. Finally, we develop a synthesized dataset of chair objects with part labels and investigate the influence of parts on RGB-D based object pose recognition using a novel network architecture we call PartNet

Development of High Angular Resolution Diffusion Imaging Analysis Paradigms for the Investigation of Neuropathology

Diffusion weighted magnetic resonance imaging (DW-MRI), provides unique insight into the microstructure of neural white matter tissue, allowing researchers to more fully investigate white matter disorders. The abundance of clinical research projects incorporating DW-MRI into their acquisition protocols speaks to the value this information lends to the study of neurological disease. However, the most widespread DW-MRI technique, diffusion tensor imaging (DTI), possesses serious limitations which restrict its utility in regions of complex white matter. Fueled by advances in DW-MRI acquisition protocols and technologies, a group of exciting new DW-MRI models, developed to address these concerns, are now becoming available to clinical researchers. The emergence of these new imaging techniques, categorized as high angular resolution diffusion imaging (HARDI), has generated the need for sophisticated computational neuroanatomic techniques able to account for the high dimensionality and structure of HARDI data. The goal of this thesis is the development of such techniques utilizing prominent HARDI data models. Specifically, methodologies for spatial normalization, population atlas building and structural connectivity have been developed and validated. These methods form the core of a comprehensive analysis paradigm allowing the investigation of local white matter microarcitecture, as well as, systemic properties of neuronal connectivity. The application of this framework to the study of schizophrenia and the autism spectrum disorders demonstrate its sensitivity sublte differences in white matter organization, as well as, its applicability to large population DW-MRI studies

Computational Methods for Segmentation of Multi-Modal Multi-Dimensional Cardiac Images

Segmentation of the heart structures helps compute the cardiac contractile function quantified via the systolic and diastolic volumes, ejection fraction, and myocardial mass, representing a reliable diagnostic value. Similarly, quantification of the myocardial mechanics throughout the cardiac cycle, analysis of the activation patterns in the heart via electrocardiography (ECG) signals, serve as good cardiac diagnosis indicators. Furthermore, high quality anatomical models of the heart can be used in planning and guidance of minimally invasive interventions under the assistance of image guidance. The most crucial step for the above mentioned applications is to segment the ventricles and myocardium from the acquired cardiac image data. Although the manual delineation of the heart structures is deemed as the gold-standard approach, it requires significant time and effort, and is highly susceptible to inter- and intra-observer variability. These limitations suggest a need for fast, robust, and accurate semi- or fully-automatic segmentation algorithms. However, the complex motion and anatomy of the heart, indistinct borders due to blood flow, the presence of trabeculations, intensity inhomogeneity, and various other imaging artifacts, makes the segmentation task challenging. In this work, we present and evaluate segmentation algorithms for multi-modal, multi-dimensional cardiac image datasets. Firstly, we segment the left ventricle (LV) blood-pool from a tri-plane 2D+time trans-esophageal (TEE) ultrasound acquisition using local phase based filtering and graph-cut technique, propagate the segmentation throughout the cardiac cycle using non-rigid registration-based motion extraction, and reconstruct the 3D LV geometry. Secondly, we segment the LV blood-pool and myocardium from an open-source 4D cardiac cine Magnetic Resonance Imaging (MRI) dataset by incorporating average atlas based shape constraint into the graph-cut framework and iterative segmentation refinement. The developed fast and robust framework is further extended to perform right ventricle (RV) blood-pool segmentation from a different open-source 4D cardiac cine MRI dataset. Next, we employ convolutional neural network based multi-task learning framework to segment the myocardium and regress its area, simultaneously, and show that segmentation based computation of the myocardial area is significantly better than that regressed directly from the network, while also being more interpretable. Finally, we impose a weak shape constraint via multi-task learning framework in a fully convolutional network and show improved segmentation performance for LV, RV and myocardium across healthy and pathological cases, as well as, in the challenging apical and basal slices in two open-source 4D cardiac cine MRI datasets. We demonstrate the accuracy and robustness of the proposed segmentation methods by comparing the obtained results against the provided gold-standard manual segmentations, as well as with other competing segmentation methods