Novel characterization method of impedance cardiography signals using time-frequency distributions

The purpose of this document is to describe a methodology to select the most adequate time-frequency distribution (TFD) kernel for the characterization of impedance cardiography signals (ICG). The predominant ICG beat was extracted from a patient and was synthetized using time-frequency variant Fourier approximations. These synthetized signals were used to optimize several TFD kernels according to a performance maximization. The optimized kernels were tested for noise resistance on a clinical database. The resulting optimized TFD kernels are presented with their performance calculated using newly proposed methods. The procedure explained in this work showcases a new method to select an appropriate kernel for ICG signals and compares the performance of different time-frequency kernels found in the literature for the case of ICG signals. We conclude that, for ICG signals, the performance (P) of the spectrogram with either Hanning or Hamming windows (P¿=¿0.780) and the extended modified beta distribution (P¿=¿0.765) provided similar results, higher than the rest of analyzed kernels.Peer ReviewedPostprint (published version

Performance evaluation of the Hilbert–Huang transform for respiratory sound analysis and its application to continuous adventitious sound characterization

© 2016. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/The use of the Hilbert–Huang transform in the analysis of biomedical signals has increased during the past few years, but its use for respiratory sound (RS) analysis is still limited. The technique includes two steps: empirical mode decomposition (EMD) and instantaneous frequency (IF) estimation. Although the mode mixing (MM) problem of EMD has been widely discussed, this technique continues to be used in many RS analysis algorithms. In this study, we analyzed the MM effect in RS signals recorded from 30 asthmatic patients, and studied the performance of ensemble EMD (EEMD) and noise-assisted multivariate EMD (NA-MEMD) as means for preventing this effect. We propose quantitative parameters for measuring the size, reduction of MM, and residual noise level of each method. These parameters showed that EEMD is a good solution for MM, thus outperforming NA-MEMD. After testing different IF estimators, we propose Kay¿s method to calculate an EEMD-Kay-based Hilbert spectrum that offers high energy concentrations and high time and high frequency resolutions. We also propose an algorithm for the automatic characterization of continuous adventitious sounds (CAS). The tests performed showed that the proposed EEMD-Kay-based Hilbert spectrum makes it possible to determine CAS more precisely than other conventional time-frequency techniques.Postprint (author's final draft

Combination of the CEEM Decomposition with Adaptive Noise and Periodogram Technique for ECG Signals Analysis

The electrocardiogram (ECG) signal is a fundamental tool for patient treatment, especially in the cardiology domain, due to the high mortality rate of heart diseases. The main objective of this paper is to present the most optimal techniques that can link the processing and analysis of ECG signals. This work is divided into two steps. In the first one, we propose a comparison between some denoising techniques that can reduce noise affecting the ECG signals; these techniques are the empirical mode decomposition (EMD), the ensemble empirical mode decomposition (EEMD), and the complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN). In the second one, we make a comparison of three time-frequency techniques: the Choi-Williams (CW), the periodogram (PE), and the smoothed pseudo Wigner-Ville (SPWV). Firstly, the obtained results illustrate the effectiveness of the CEEMDAN in reducing noise that interferes with ECG signals compared to other denoising methods. Secondly, they show that the periodogram time-frequency technique gives a good detection and localization of the main components in the time-frequency plan of ECG signals. This work proves the utility of the combination of the periodogram and CEEMDAN techniques in analyzing the ECG signals

On the potential of empirical mode decomposition for RFI mitigation in microwave radiometry

Radio-frequency interference (RFI) is an increasing problem particularly for Earth observation using microwave radiometry. RFI has been observed, for example, at L-band by the European Space Agency’s (ESA’s) soil moisture and ocean salinity (SMOS) Earth Explorer and by National Aeronautics and Space Administration’s (NASA’s) soil moisture active passive (SMAP) and Aquarius missions, as well as at C-band by Advanced Microwave Scanning Radiometer (AMSR)-E and AMSR-2, and at 10.7 and 18.7 GHz by AMSR-E, AMSR-2, WindSat, and GPM Microwave Imager (GMI). Therefore, systems dedicated to interference detection and removal of contaminated measurements are nowadays a must in order to improve radiometric accuracy and reduce the loss of spatial coverage caused by interference. In this work, the feasibility of using the empirical mode decomposition (EMD) technique for RFI mitigation is explored. The EMD, also known as Hilbert–Huang transform (HHT), is an algorithm that decomposes the signal into intrinsic mode functions (IMFs). The achieved performance is analyzed, and the opportunities and caveats that this type of methods present are described. EMD is found to be a practical RFI mitigation method, albeit presenting some limitations and considerable complexity. Nevertheless, in some conditions, EMD exhibits a better performance than other commonly used methods (such as frequency binning). In particular, it has been found that EMD performs well for RFI affecting the <25% lower part of the intermediate frequency (IF) bandwidth.This work was supported in part by the Sensing With Pioneering Opportunistic Techniques (SPOT) under Grant RTI2018-099008-B-C21/ AEI/10.13039/501100011033, in part by the RYC-2016-20918 under Grant MCIN/AEI/10.13039/501100011033, and in part by the European Social Fund (ESF), Investing in your future.Peer ReviewedPostprint (author's final draft

Wavelet-Based Multicomponent Denoising Profile for the Classification of Hyperspectral Images

The high resolution of the hyperspectral remote sensing images available allows the detailed analysis of even small spatial structures. As a consequence, the study of techniques to efficiently extract spatial information is a very active realm. In this paper, we propose a novel denoising wavelet-based profile for the extraction of spatial information that does not require parameters fixed by the user. Over each band obtained by a wavelet-based feature extraction technique, a denoising profile (DP) is built through the recursive application of discrete wavelet transforms followed by a thresholding process. Each component of the DP consists of features reconstructed by recursively applying inverse wavelet transforms to the thresholded coefficients. Several thresholding methods are explored. In order to show the effectiveness of the extended DP (EDP), we propose a classification scheme based on the computation of the EDP and supervised classification by extreme learning machine. The obtained results are compared to other state-of-the-art methods based on profiles in the literature. An additional study of behavior in the presence of added noise is also performed showing the high reliability of the EDP proposedThis work was supported in part by the Consellería de Educación, Universidade e Formación Profesional under Grants GRC2014/008 and ED431C 2018/2019 and the Ministerio de Economía y Empresa, Gobierno de España under Grant TIN2016-76373-P. Both are cofunded by the European Regional Development FundS

Monte Carlo-based Noise Compensation in Coil Intensity Corrected Endorectal MRI

Background: Prostate cancer is one of the most common forms of cancer found in males making early diagnosis important. Magnetic resonance imaging (MRI) has been useful in visualizing and localizing tumor candidates and with the use of endorectal coils (ERC), the signal-to-noise ratio (SNR) can be improved. The coils introduce intensity inhomogeneities and the surface coil intensity correction built into MRI scanners is used to reduce these inhomogeneities. However, the correction typically performed at the MRI scanner level leads to noise amplification and noise level variations. Methods: In this study, we introduce a new Monte Carlo-based noise compensation approach for coil intensity corrected endorectal MRI which allows for effective noise compensation and preservation of details within the prostate. The approach accounts for the ERC SNR profile via a spatially-adaptive noise model for correcting non-stationary noise variations. Such a method is useful particularly for improving the image quality of coil intensity corrected endorectal MRI data performed at the MRI scanner level and when the original raw data is not available. Results: SNR and contrast-to-noise ratio (CNR) analysis in patient experiments demonstrate an average improvement of 11.7 dB and 11.2 dB respectively over uncorrected endorectal MRI, and provides strong performance when compared to existing approaches. Conclusions: A new noise compensation method was developed for the purpose of improving the quality of coil intensity corrected endorectal MRI data performed at the MRI scanner level. We illustrate that promising noise compensation performance can be achieved for the proposed approach, which is particularly important for processing coil intensity corrected endorectal MRI data performed at the MRI scanner level and when the original raw data is not available.Comment: 23 page

Parameter optimization for local polynomial approximation based intersection confidence interval filter using genetic algorithm: an application for brain MRI image de-noising

Magnetic resonance imaging (MRI) is extensively exploited for more accuratepathological changes as well as diagnosis. Conversely, MRI suffers from variousshortcomings such as ambient noise from the environment, acquisition noise from theequipment, the presence of background tissue, breathing motion, body fat, etc.Consequently, noise reduction is critical as diverse types of the generated noise limit the efficiency of the medical image diagnosis. Local polynomial approximation basedintersection confidence interval (LPA-ICI) filter is one of the effective de-noising filters.This filter requires an adjustment of the ICI parameters for efficient window size selection.From the wide range of ICI parametric values, finding out the best set of tunes values is itselfan optimization problem. The present study proposed a novel technique for parameteroptimization of LPA-ICI filter using genetic algorithm (GA) for brain MR imagesde-noising. The experimental results proved that the proposed method outperforms theLPA-ICI method for de-noising in terms of various performance metrics for different noisevariance levels. Obtained results reports that the ICI parameter values depend on the noisevariance and the concerned under test image

A tomographic analysis of reflectometry data I: Component factorization

Many signals in Nature, technology and experiment have a multi-component structure. By spectral decomposition and projection on the eigenvectors of a family of unitary operators, a robust method is developed to decompose a signals in its components. Different signal traits may be emphasized by different choices of the unitary family. The method is illustrated in simulated data and on data obtained from plasma reflectometry experiments in the tore Supra.Comment: 27 pages Latex, 17 figure