AUTOMATIC EEG CLASSIFICATION USING DENSITY BASED ALGORITHMS DBSCAN AND DENCLUE

Electroencephalograph (EEG) is a commonly used method in neurological practice. Automatic classifiers (algorithms) highlight signal sections with interesting activity and assist an expert with record scoring. Algorithm K-means is one of the most commonly used methods for EEG inspection. In this paper, we propose/apply a method based on density-oriented algorithms DBSCAN and DENCLUE. DBSCAN and DENCLUE separate the nested clusters against K-means. All three algorithms were validated on a testing dataset and after that adapted for a real EEG records classification. 24 dimensions EEG feature space were classified into 5 classes (physiological, epileptic, EOG, electrode, and EMG artefact). Modified DBSCAN and DENCLUE create more than two homogeneous classes of the epileptic EEG data. The results offer an opportunity for the EEG scoring in clinical practice. The big advantage of the proposed algorithms is the high homogeneity of the epileptic class

Characterization of A phases during the Cyclic Alternating Pattern of sleep

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A review of automated sleep disorder detection

Automated sleep disorder detection is challenging because physiological symptoms can vary widely. These variations make it difficult to create effective sleep disorder detection models which support hu-man experts during diagnosis and treatment monitoring. From 2010 to 2021, authors of 95 scientific papers have taken up the challenge of automating sleep disorder detection. This paper provides an expert review of this work. We investigated whether digital technology and Artificial Intelligence (AI) can provide automated diagnosis support for sleep disorders. We followed the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines during the content discovery phase. We compared the performance of proposed sleep disorder detection methods, involving differ-ent datasets or signals. During the review, we found eight sleep disorders, of which sleep apnea and insomnia were the most studied. These disorders can be diagnosed using several kinds of biomedical signals, such as Electrocardiogram (ECG), Polysomnography (PSG), Electroencephalogram (EEG), Electromyogram (EMG), and snore sound. Subsequently, we established areas of commonality and distinctiveness. Common to all reviewed papers was that AI models were trained and tested with labelled physiological signals. Looking deeper, we discovered that 24 distinct algorithms were used for the detection task. The nature of these algorithms evolved, before 2017 only traditional Machine Learning (ML) was used. From 2018 onward, both ML and Deep Learning (DL) methods were used for sleep disorder detection. The strong emergence of DL algorithms has considerable implications for future detection systems because these algorithms demand significantly more data for training and testing when compared with ML. Based on our review results, we suggest that both type and amount of labelled data is crucial for the design of future sleep disorder detection systems because this will steer the choice of AI algorithm which establishes the desired decision support. As a guiding principle, more labelled data will help to represent the variations in symptoms. DL algorithms can extract information from these larger data quantities more effectively, therefore; we predict that the role of these algorithms will continue to expand

Analysis of Signal Decomposition and Stain Separation methods for biomedical applications

Nowadays, the biomedical signal processing and classification and medical image interpretation play an essential role in the detection and diagnosis of several human diseases. The problem of high variability and heterogeneity of information, which is extracted from digital data, can be addressed with signal decomposition and stain separation techniques which can be useful approaches to highlight hidden patterns or rhythms in biological signals and specific cellular structures in histological color images, respectively. This thesis work can be divided into two macro-sections. In the first part (Part I), a novel cascaded RNN model based on long short-term memory (LSTM) blocks is presented with the aim to classify sleep stages automatically. A general workflow based on single-channel EEG signals is developed to enhance the low performance in staging N1 sleep without reducing the performances in the other sleep stages (i.e. Wake, N2, N3 and REM). In the same context, several signal decomposition techniques and time-frequency representations are deployed for the analysis of EEG signals. All extracted features are analyzed by using a novel correlation-based timestep feature selection and finally the selected features are fed to a bidirectional RNN model. In the second part (Part II), a fully automated method named SCAN (Stain Color Adaptive Normalization) is proposed for the separation and normalization of staining in digital pathology. This normalization system allows to standardize digitally, automatically and in a few seconds, the color intensity of a tissue slide with respect to that of a target image, in order to improve the pathologist’s diagnosis and increase the accuracy of computer-assisted diagnosis (CAD) systems. Multiscale evaluation and multi-tissue comparison are performed for assessing the robustness of the proposed method. In addition, a stain normalization based on a novel mathematical technique, named ICD (Inverse Color Deconvolution) is developed for immunohistochemical (IHC) staining in histopathological images. In conclusion, the proposed techniques achieve satisfactory results compared to state-of-the-art methods in the same research field. The workflow proposed in this thesis work and the developed algorithms can be employed for the analysis and interpretation of other biomedical signals and for digital medical image analysis

Haematological malignancy: are we measuring what is important to patients? A systematic review of quality of life instruments

© 2018 The Authors. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.The wide range of health‐related quality‐of‐life (HRQoL) instruments used in haematology makes it challenging for haematologists and other care team members in practice to select, use and understand the scoring system and finally interpret the results. The main objectives of this study were to: (a) provide a comprehensive list of quality‐of‐life issues important to patients suffering from haematological malignancies, identified through the literature; (b) provide a list of health‐related quality‐of‐life (HRQoL) instruments used in haematological malignancies in both daily clinical practice and research; and (c) evaluate the relevance and comprehensibility of the identified instruments in haematological malignancies. Systematic literature review of two databases, followed by addition of articles by manual searching, was carried out. The articles focusing on the primary studies, which have used semi‐structured/structured interviews or surveys to identify issues important to HM patients, and other studies describing the results of testing measurement properties, such as reliability, validity and responsiveness of the instruments currently used to evaluate the HRQoL in different HMs, were included. Fifty‐seven studies reported development and validation of 30 HRQoL instruments, which have been used in haematology. Twenty‐four studies were identified using qualitative methods to report HRQoL issues and symptoms from a patient's perspective. No identified instrument captured all the issues identified from the qualitative studies. None of the instruments reviewed appeared to have been developed for use in clinical practice and specifically for patients with HM, except MyPOS. Furthermore, measurement properties were established, largely, in clinical trial scenarios. There is a need for development of a new HRQoL instrument entirely based on involvement of patients with haematological malignancies.Peer reviewe

Person authentication using electroencephalogram (EEG) brainwaves signals

This chapter starts with the introduction to various types of authentication modalities, before discussing on the implementation of electroencephalogram (EEG) signals for person authentication task in more details. In general, the EEG signals are unique but highly uncertain, noisy, and difficult to analyze. Event-related potentials, such as visual-evoked potentials, are commonly used in the person authentication literature work. The occipital area of the brain anatomy shows good response to the visual stimulus. Hence, a set of eight selected EEG channels located at the occipital area were used for model training. Besides, feature extraction methods, i.e., the WPD, Hjorth parameter, coherence, cross-correlation, mutual information, and mean of amplitude have been proven to be good in extracting relevant information from the EEG signals. Nevertheless, different features demonstrate varied performance on distinct subjects. Thus, the Correlation-based Feature Selection method was used to select the significant features subset to enhance the authentication performance. Finally, the Fuzzy-Rough Nearest Neighbor classifier was proposed for authentication model building. The experimental results showed that the proposed solution is able to discriminate imposter from target subjects in the person authentication task

A novel automated autism spectrum disorder detection system

Autism spectrum disorder (ASD) is a neurological and developmental disorder that begins early in childhood and lasts throughout a person’s life. Autism is influenced by both genetic and environmental factors. Lack of social interaction, communication problems, and a limited range of behaviors and interests are possible characteristics of autism in children, alongside other symptoms. Electroencephalograms provide useful information about changes in brain activity and hence are efficaciously used for diagnosis of neurological disease. Eighteen nonlinear features were extracted from EEG signals of 40 children with a diagnosis of autism spectrum disorder and 37 children with no diagnosis of neuro developmental disorder children. Feature selection was performed using Student’s t test, and Marginal Fisher Analysis was employed for data reduction. The features were ranked according to Student’s t test. The three most significant features were used to develop the autism index, while the ranked feature set was input to SVM polynomials 1, 2, and 3 for classification. The SVM polynomial 2 yielded the highest classification accuracy of 98.70% with 20 features. The developed classification system is likely to aid healthcare professionals as a diagnostic tool to detect autism. With more data, in our future work, we intend to employ deep learning models and to explore a cloud-based detection system for the detection of autism. Our study is novel, as we have analyzed all nonlinear features, and we are one of the first groups to have uniquely developed an autism (ASD) index using the extracted features

Sleep Stage Classification Using EEG Signal Analysis: A Comprehensive Survey and New Investigation

Sleep specialists often conduct manual sleep stage scoring by visually inspecting the patient’s neurophysiological signals collected at sleep labs. This is, generally, a very difficult, tedious and time-consuming task. The limitations of manual sleep stage scoring have escalated the demand for developing Automatic Sleep Stage Classification (ASSC) systems. Sleep stage classification refers to identifying the various stages of sleep and is a critical step in an effort to assist physicians in the diagnosis and treatment of related sleep disorders. The aim of this paper is to survey the progress and challenges in various existing Electroencephalogram (EEG) signal-based methods used for sleep stage identification at each phase; including pre-processing, feature extraction and classification; in an attempt to find the research gaps and possibly introduce a reasonable solution. Many of the prior and current related studies use multiple EEG channels, and are based on 30 s or 20 s epoch lengths which affect the feasibility and speed of ASSC for real-time applications. Thus, in this paper, we also present a novel and efficient technique that can be implemented in an embedded hardware device to identify sleep stages using new statistical features applied to 10 s epochs of single-channel EEG signals. In this study, the PhysioNet Sleep European Data Format (EDF) Database was used. The proposed methodology achieves an average classification sensitivity, specificity and accuracy of 89.06%, 98.61% and 93.13%, respectively, when the decision tree classifier is applied. Finally, our new method is compared with those in recently published studies, which reiterates the high classification accuracy performance.https://doi.org/10.3390/e1809027