Pattern matching in compilers

In this thesis we develop tools for effective and flexible pattern matching. We introduce a new pattern matching system called amethyst. Amethyst is not only a generator of parsers of programming languages, but can also serve as an alternative to tools for matching regular expressions. Our framework also produces dynamic parsers. Its intended use is in the context of IDE (accurate syntax highlighting and error detection on the fly). Amethyst offers pattern matching of general data structures. This makes it a useful tool for implementing compiler optimizations such as constant folding, instruction scheduling, and dataflow analysis in general. The parsers produced are essentially top-down parsers. Linear time complexity is obtained by introducing the novel notion of structured grammars and regularized regular expressions. Amethyst uses techniques known from compiler optimizations to produce effective parsers.Comment: master thesi

Efficient Monitoring of Parametric Context Free Patterns

Recent developments in runtime verification and monitoring show that parametric regular and temporal logic specifications can be efficiently monitored against large programs. However, these logics reduce to ordinary finite automata, limiting their expressivity. For example, neither can specify structured properties that refer to the call stack of the program. While context-free grammars (CFGs) are expressive and well-understood, existing techniques of monitoring CFGs generate massive runtime overhead in real-life applications. This paper shows for the first time that monitoring parametric CFGs is practical (on the order of 10% or lower for average cases, several times faster than the state-of-the-art). We present a monitor synthesis algorithm for CFGs based on an LR(1) parsing algorithm, modified with stack cloning to account for good prefix matching. In addition, a logic-independent mechanism is introduced to support partial matching, allowing patterns to be checked against fragments of execution traces

Using temporal abduction for biosignal interpretation: A case study on QRS detection

In this work, we propose an abductive framework for biosignal interpretation, based on the concept of Temporal Abstraction Patterns. A temporal abstraction pattern defines an abstraction relation between an observation hypothesis and a set of observations constituting its evidence support. New observations are generated abductively from any subset of the evidence of a pattern, building an abstraction hierarchy of observations in which higher levels contain those observations with greater interpretative value of the physiological processes underlying a given signal. Non-monotonic reasoning techniques have been applied to this model in order to find the best interpretation of a set of initial observations, permitting even to correct these observations by removing, adding or modifying them in order to make them consistent with the available domain knowledge. Some preliminary experiments have been conducted to apply this framework to a well known and bounded problem: the QRS detection on ECG signals. The objective is not to provide a new better QRS detector, but to test the validity of an abductive paradigm. These experiments show that a knowledge base comprising just a few very simple rhythm abstraction patterns can enhance the results of a state of the art algorithm by significantly improving its detection F1-score, besides proving the ability of the abductive framework to correct both sensitivity and specificity failures.Comment: 7 pages, Healthcare Informatics (ICHI), 2014 IEEE International Conference o

Left Recursion in Parsing Expression Grammars

Parsing Expression Grammars (PEGs) are a formalism that can describe all deterministic context-free languages through a set of rules that specify a top-down parser for some language. PEGs are easy to use, and there are efficient implementations of PEG libraries in several programming languages. A frequently missed feature of PEGs is left recursion, which is commonly used in Context-Free Grammars (CFGs) to encode left-associative operations. We present a simple conservative extension to the semantics of PEGs that gives useful meaning to direct and indirect left-recursive rules, and show that our extensions make it easy to express left-recursive idioms from CFGs in PEGs, with similar results. We prove the conservativeness of these extensions, and also prove that they work with any left-recursive PEG. PEGs can also be compiled to programs in a low-level parsing machine. We present an extension to the semantics of the operations of this parsing machine that let it interpret left-recursive PEGs, and prove that this extension is correct with regards to our semantics for left-recursive PEGs.Comment: Extended version of the paper "Left Recursion in Parsing Expression Grammars", that was published on 2012 Brazilian Symposium on Programming Language

Answering Regular Path Queries on Workflow Provenance

This paper proposes a novel approach for efficiently evaluating regular path queries over provenance graphs of workflows that may include recursion. The approach assumes that an execution g of a workflow G is labeled with query-agnostic reachability labels using an existing technique. At query time, given g, G and a regular path query R, the approach decomposes R into a set of subqueries R1, ..., Rk that are safe for G. For each safe subquery Ri, G is rewritten so that, using the reachability labels of nodes in g, whether or not there is a path which matches Ri between two nodes can be decided in constant time. The results of each safe subquery are then composed, possibly with some small unsafe remainder, to produce an answer to R. The approach results in an algorithm that significantly reduces the number of subqueries k over existing techniques by increasing their size and complexity, and that evaluates each subquery in time bounded by its input and output size. Experimental results demonstrate the benefit of this approach