9,292 research outputs found
Exploratory analysis of excitation-emission matrix fluorescence spectra with self-organizing maps as a basis for determination of organic matter removal efficiency at water treatment works
In the paper, the self-organizing map (SOM) was employed for the exploratory analysis of fluorescence excitation-emission data characterizing organic matter removal efficiency at 16 water treatment works in the UK. Fluorescence spectroscopy was used to assess organic matter removal efficiency between raw and partially treated (clarified) water to provide an indication of the potential for disinfection by-products formation. Fluorescence spectroscopy was utilized to evaluate quantitative and qualitative properties of organic matter removal. However, the substantial amount of fluorescence data generated impeded the interpretation process. Therefore a robust SOM technique was used to examine the fluorescence data and to reveal patterns in data distribution and correlations between organic matter properties and fluorescence variables. It was found that the SOM provided a good discrimination between water treatment sites on the base of spectral properties of organic matter. The distances between the units of the SOM map were indicative of the similarity of the fluorescence samples and thus demonstrated the relative changes in organic matter content between raw and clarified water. The higher efficiency of organic matter removal was demonstrated for the larger distances between raw and clarified samples on the map. It was also shown that organic matter removal was highly dependent on the raw water fluorescence properties, with higher efficiencies for higher emission wavelengths in visible and UV humic-like fluorescence centers
Neural Networks for Complex Data
Artificial neural networks are simple and efficient machine learning tools.
Defined originally in the traditional setting of simple vector data, neural
network models have evolved to address more and more difficulties of complex
real world problems, ranging from time evolving data to sophisticated data
structures such as graphs and functions. This paper summarizes advances on
those themes from the last decade, with a focus on results obtained by members
of the SAMM team of Universit\'e Paris
Somoclu: An Efficient Parallel Library for Self-Organizing Maps
Somoclu is a massively parallel tool for training self-organizing maps on
large data sets written in C++. It builds on OpenMP for multicore execution,
and on MPI for distributing the workload across the nodes in a cluster. It is
also able to boost training by using CUDA if graphics processing units are
available. A sparse kernel is included, which is useful for high-dimensional
but sparse data, such as the vector spaces common in text mining workflows.
Python, R and MATLAB interfaces facilitate interactive use. Apart from fast
execution, memory use is highly optimized, enabling training large emergent
maps even on a single computer.Comment: 26 pages, 9 figures. The code is available at
https://peterwittek.github.io/somoclu
Analytical methods and experimental approaches for electrophysiological studies of brain oscillations
Brain oscillations are increasingly the subject of electrophysiological studies probing their role in the functioning and dysfunction of the human brain. In recent years this research area has seen rapid and significant changes in the experimental approaches and analysis methods. This article reviews these developments and provides a structured overview of experimental approaches, spectral analysis techniques and methods to establish relationships between brain oscillations and behaviour
Electrophysiological Signatures of Spatial Boundaries in the Human Subiculum.
Environmental boundaries play a crucial role in spatial navigation and memory across a wide range of distantly related species. In rodents, boundary representations have been identified at the single-cell level in the subiculum and entorhinal cortex of the hippocampal formation. Although studies of hippocampal function and spatial behavior suggest that similar representations might exist in humans, boundary-related neural activity has not been identified electrophysiologically in humans until now. To address this gap in the literature, we analyzed intracranial recordings from the hippocampal formation of surgical epilepsy patients (of both sexes) while they performed a virtual spatial navigation task and compared the power in three frequency bands (1-4, 4-10, and 30-90 Hz) for target locations near and far from the environmental boundaries. Our results suggest that encoding locations near boundaries elicited stronger theta oscillations than for target locations near the center of the environment and that this difference cannot be explained by variables such as trial length, speed, movement, or performance. These findings provide direct evidence of boundary-dependent neural activity localized in humans to the subiculum, the homolog of the hippocampal subregion in which most boundary cells are found in rodents, and indicate that this system can represent attended locations that rather than the position of one\u27s own body
Communication channel analysis and real time compressed sensing for high density neural recording devices
Next generation neural recording and Brain-
Machine Interface (BMI) devices call for high density or distributed
systems with more than 1000 recording sites. As the
recording site density grows, the device generates data on the
scale of several hundred megabits per second (Mbps). Transmitting
such large amounts of data induces significant power
consumption and heat dissipation for the implanted electronics.
Facing these constraints, efficient on-chip compression techniques
become essential to the reduction of implanted systems power
consumption. This paper analyzes the communication channel
constraints for high density neural recording devices. This paper
then quantifies the improvement on communication channel
using efficient on-chip compression methods. Finally, This paper
describes a Compressed Sensing (CS) based system that can
reduce the data rate by > 10x times while using power on
the order of a few hundred nW per recording channel
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