Process algebra modelling styles for biomolecular processes

We investigate how biomolecular processes are modelled in process algebras, focussing on chemical reactions. We consider various modelling styles and how design decisions made in the definition of the process algebra have an impact on how a modelling style can be applied. Our goal is to highlight the often implicit choices that modellers make in choosing a formalism, and illustrate, through the use of examples, how this can affect expressability as well as the type and complexity of the analysis that can be performed

AmbieSense: a system and reference architecture for personalised and context-sensitive information services for mobile users

The purpose of AmbieSense is to provide personalised, context-sensitive information to the mobile user. It is about augmenting digital information to physical objects, rooms, and areas. The aim is to provide relevant information to the right user and situation. Digital content is distributed from the surroundings and onto your mobile phone. An ambient information environment is provided by a combination of context tag technology, a software platform to manage and deliver the information, and personal computing devices to which the information is served. This paper describes how the AmbieSense reference architecture has been defined and used in order to deliver information to the mobile citizen at the right time, place and situation. Information is provided via specialist content providers. The application area addresses the information needs of travellers and tourists

Lambda Calculus in Core Aldwych

Core Aldwych is a simple model for concurrent computation, involving the concept of agents which communicate through shared variables. Each variable will have exactly one agent that can write to it, and its value can never be changed once written, but a value can contain further variables which are written to later. A key aspect is that the reader of a value may become the writer of variables in it. In this paper we show how this model can be used to encode lambda calculus. Individual function applications can be explicitly encoded as lazy or not, as required. We then show how this encoding can be extended to cover functions which manipulate mutable variables, but with the underlying Core Aldwych implementation still using only immutable variables. The ordering of function applications then becomes an issue, with Core Aldwych able to model either the enforcement of an ordering or the retention of indeterminate ordering, which allows parallel execution

Programming Languages for Distributed Computing Systems

When distributed systems first appeared, they were programmed in traditional sequential languages, usually with the addition of a few library procedures for sending and receiving messages. As distributed applications became more commonplace and more sophisticated, this ad hoc approach became less satisfactory. Researchers all over the world began designing new programming languages specifically for implementing distributed applications. These languages and their history, their underlying principles, their design, and their use are the subject of this paper. We begin by giving our view of what a distributed system is, illustrating with examples to avoid confusion on this important and controversial point. We then describe the three main characteristics that distinguish distributed programming languages from traditional sequential languages, namely, how they deal with parallelism, communication, and partial failures. Finally, we discuss 15 representative distributed languages to give the flavor of each. These examples include languages based on message passing, rendezvous, remote procedure call, objects, and atomic transactions, as well as functional languages, logic languages, and distributed data structure languages. The paper concludes with a comprehensive bibliography listing over 200 papers on nearly 100 distributed programming languages

Applying constraint solving to the management of distributed applications

Submitted to DOA08We present our approach for deploying and managing distributed component-based applications. A Desired State Description (DSD), written in a high-level declarative language, specifies requirements for a distributed application. Our infrastructure accepts a DSD as input, and from it automatically configures and deploys the distributed application. Subsequent violations of the original requirements are detected and, where possible, automatically rectified by reconfiguration and redeployment of the necessary application components. A constraint solving tool is used to plan deployments that meet the application requirements.Postprin

Fifty years of Hoare's Logic

We present a history of Hoare's logic.Comment: 79 pages. To appear in Formal Aspects of Computin

Process-Oriented Collective Operations

Distributing process-oriented programs across a cluster of machines requires careful attention to the effects of network latency. The MPI standard, widely used for cluster computation, defines a number of collective operations: efficient, reusable algorithms for performing operations among a group of machines in the cluster. In this paper, we describe our techniques for implementing MPI communication patterns in process-oriented languages, and how we have used them to implement collective operations in PyCSP and occam-pi on top of an asynchronous messaging framework. We show how to make use of collective operations in distributed processoriented applications. We also show how the process-oriented model can be used to increase concurrency in existing collective operation algorithms