57,429 research outputs found
Computerized Analysis of Magnetic Resonance Images to Study Cerebral Anatomy in Developing Neonates
The study of cerebral anatomy in developing neonates is of great importance for
the understanding of brain development during the early period of life. This
dissertation therefore focuses on three challenges in the modelling of cerebral
anatomy in neonates during brain development. The methods that have been
developed all use Magnetic Resonance Images (MRI) as source data.
To facilitate study of vascular development in the neonatal period, a set of image
analysis algorithms are developed to automatically extract and model cerebral
vessel trees. The whole process consists of cerebral vessel tracking from
automatically placed seed points, vessel tree generation, and vasculature
registration and matching. These algorithms have been tested on clinical Time-of-
Flight (TOF) MR angiographic datasets.
To facilitate study of the neonatal cortex a complete cerebral cortex segmentation
and reconstruction pipeline has been developed. Segmentation of the neonatal
cortex is not effectively done by existing algorithms designed for the adult brain
because the contrast between grey and white matter is reversed. This causes pixels
containing tissue mixtures to be incorrectly labelled by conventional methods. The
neonatal cortical segmentation method that has been developed is based on a novel
expectation-maximization (EM) method with explicit correction for mislabelled
partial volume voxels. Based on the resulting cortical segmentation, an implicit
surface evolution technique is adopted for the reconstruction of the cortex in
neonates. The performance of the method is investigated by performing a detailed
landmark study.
To facilitate study of cortical development, a cortical surface registration algorithm
for aligning the cortical surface is developed. The method first inflates extracted
cortical surfaces and then performs a non-rigid surface registration using free-form
deformations (FFDs) to remove residual alignment. Validation experiments using
data labelled by an expert observer demonstrate that the method can capture local
changes and follow the growth of specific sulcus
Active Image-based Modeling with a Toy Drone
Image-based modeling techniques can now generate photo-realistic 3D models
from images. But it is up to users to provide high quality images with good
coverage and view overlap, which makes the data capturing process tedious and
time consuming. We seek to automate data capturing for image-based modeling.
The core of our system is an iterative linear method to solve the multi-view
stereo (MVS) problem quickly and plan the Next-Best-View (NBV) effectively. Our
fast MVS algorithm enables online model reconstruction and quality assessment
to determine the NBVs on the fly. We test our system with a toy unmanned aerial
vehicle (UAV) in simulated, indoor and outdoor experiments. Results show that
our system improves the efficiency of data acquisition and ensures the
completeness of the final model.Comment: To be published on International Conference on Robotics and
Automation 2018, Brisbane, Australia. Project Page:
https://huangrui815.github.io/active-image-based-modeling/ The author's
personal page: http://www.sfu.ca/~rha55
Reconstruction of hidden 3D shapes using diffuse reflections
We analyze multi-bounce propagation of light in an unknown hidden volume and
demonstrate that the reflected light contains sufficient information to recover
the 3D structure of the hidden scene. We formulate the forward and inverse
theory of secondary and tertiary scattering reflection using ideas from energy
front propagation and tomography. We show that using careful choice of
approximations, such as Fresnel approximation, greatly simplifies this problem
and the inversion can be achieved via a backpropagation process. We provide a
theoretical analysis of the invertibility, uniqueness and choices of
space-time-angle dimensions using synthetic examples. We show that a 2D streak
camera can be used to discover and reconstruct hidden geometry. Using a 1D high
speed time of flight camera, we show that our method can be used recover 3D
shapes of objects "around the corner"
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