Cancer diagnosis using deep learning: A bibliographic review

In this paper, we first describe the basics of the field of cancer diagnosis, which includes steps of cancer diagnosis followed by the typical classification methods used by doctors, providing a historical idea of cancer classification techniques to the readers. These methods include Asymmetry, Border, Color and Diameter (ABCD) method, seven-point detection method, Menzies method, and pattern analysis. They are used regularly by doctors for cancer diagnosis, although they are not considered very efficient for obtaining better performance. Moreover, considering all types of audience, the basic evaluation criteria are also discussed. The criteria include the receiver operating characteristic curve (ROC curve), Area under the ROC curve (AUC), F1 score, accuracy, specificity, sensitivity, precision, dice-coefficient, average accuracy, and Jaccard index. Previously used methods are considered inefficient, asking for better and smarter methods for cancer diagnosis. Artificial intelligence and cancer diagnosis are gaining attention as a way to define better diagnostic tools. In particular, deep neural networks can be successfully used for intelligent image analysis. The basic framework of how this machine learning works on medical imaging is provided in this study, i.e., pre-processing, image segmentation and post-processing. The second part of this manuscript describes the different deep learning techniques, such as convolutional neural networks (CNNs), generative adversarial models (GANs), deep autoencoders (DANs), restricted Boltzmann’s machine (RBM), stacked autoencoders (SAE), convolutional autoencoders (CAE), recurrent neural networks (RNNs), long short-term memory (LTSM), multi-scale convolutional neural network (M-CNN), multi-instance learning convolutional neural network (MIL-CNN). For each technique, we provide Python codes, to allow interested readers to experiment with the cited algorithms on their own diagnostic problems. The third part of this manuscript compiles the successfully applied deep learning models for different types of cancers. Considering the length of the manuscript, we restrict ourselves to the discussion of breast cancer, lung cancer, brain cancer, and skin cancer. The purpose of this bibliographic review is to provide researchers opting to work in implementing deep learning and artificial neural networks for cancer diagnosis a knowledge from scratch of the state-of-the-art achievements

Triagem robusta de melanoma : em defesa dos descritores aprimorados de nível médio

Orientadores: Eduardo Alves do Valle Junior, Sandra Eliza Fontes de AvilaDissertação (mestrado) - Universidade Estadual de Campinas, Faculdade de Engenharia Elétrica e de ComputaçãoResumo: Melanoma é o tipo de câncer de pele que mais leva à morte, mesmo sendo o mais curável, se detectado precocemente. Considerando que a presença de um dermatologista em tempo integral não é economicamente viável para muitas cidades e especialmente em comunidades carentes, ferramentas de auxílio ao diagnóstico para a triagem do melanoma têm sido um tópico de pesquisa ativo. Muitos trabalhos existentes são baseados no modelo Bag-of-Visual-Words (BoVW), combinando descritores de cor e textura. No entanto, o modelo BoVW vem se aprimorando e hoje existem várias extensões que levam a melhores taxas de acerto em tarefas gerais de classificação de imagens. Estes modelos avançados ainda não foram explorados para rastreio de melanoma, motivando assim este trabalho. Aqui nós apresentamos uma nova abordagem para rastreio de melanoma baseado nos descritores BossaNova, que são estado-da-arte, mostrando resultados muito promissores, com uma AUC de 93,7%. Este trabalho também propõe uma nova estratégia de pooling espacial especialmente desenhada para rastreio de melanoma. Outra contribuição dessa pesquisa é o uso inédito do BossaNova na classificação de melanoma. Isso abre oportunidades de exploração deste descritor em outros contextos médicosAbstract: Melanoma is the type of skin cancer that most leads to death, even being the most curable, if detected early. Since the presence of a full time dermatologist is not economical feasible for many small cities and specially in underserved communities, computer-aided diagnosis for melanoma screening has been a topic of active research. Much of the existing art is based on the Bag-of-Visual-Words (BoVW) model, combining color and texture descriptors. However, the BoVW model has been improving and nowadays there are several extensions that perform better classification rates in general image classification tasks. These enhanced models were not explored yet for melanoma screening, thus motivating our work. Here we present a new approach for melanoma screening, based upon the state-of-the-art BossaNova descriptors, showing very promising results for screening, reaching an AUC of up to 93.7%. This work also proposes a new spatial pooling strategy specially designed for melanoma screening. Other contribution of this research is the unprecedented use of BossaNova in melanoma classification. This opens the opportunity to explore this enhanced mid-level descriptors in other medical contextsMestradoEngenharia de ComputaçãoMestre em Engenharia Elétric

Convolutional Neural Networks for Predicting Skin Lesions of Melanoma

Diagnosis of an unknown skin lesion is crucial to enable proper treatments. While curable with early diagnosis, only highly trained dermatologists are capable of accurately recognize melanoma skin lesions. Expert dermatologist classification for melanoma dermoscopic images is 65-66%. As expertise is in limited supply, systems that can automatically classify skin lesions as either benign or malignant melanoma are very useful as initial screening tools. Towards this goal, this study presents a convolutional neural network model, trained on features extracted from a highway convolutional neural network pretrained on dermoscopic images of skin lesions. This requires no lesion segmentation nor complex preprocessing. Further, it doesn’t cost much computational power to train the model. This proposed approach achieves a favorable training accuracy of 98%, validation accuracy of 64.57% and validation loss 0.07 in the model with 46% sensitivity and 64% classification accuracy in testing data

A Review on Skin Disease Classification and Detection Using Deep Learning Techniques

Skin cancer ranks among the most dangerous cancers. Skin cancers are commonly referred to as Melanoma. Melanoma is brought on by genetic faults or mutations on the skin, which are caused by Unrepaired Deoxyribonucleic Acid (DNA) in skin cells. It is essential to detect skin cancer in its infancy phase since it is more curable in its initial phases. Skin cancer typically progresses to other regions of the body. Owing to the disease's increased frequency, high mortality rate, and prohibitively high cost of medical treatments, early diagnosis of skin cancer signs is crucial. Due to the fact that how hazardous these disorders are, scholars have developed a number of early-detection techniques for melanoma. Lesion characteristics such as symmetry, colour, size, shape, and others are often utilised to detect skin cancer and distinguish benign skin cancer from melanoma. An in-depth investigation of deep learning techniques for melanoma's early detection is provided in this study. This study discusses the traditional feature extraction-based machine learning approaches for the segmentation and classification of skin lesions. Comparison-oriented research has been conducted to demonstrate the significance of various deep learning-based segmentation and classification approaches

Automatic Skin Cancer Detection in Dermoscopy Images Based on Ensemble Lightweight Deep Learning Network

The complex detection background and lesion features make the automatic detection of dermoscopy image lesions face many challenges. The previous solutions mainly focus on using larger and more complex models to improve the accuracy of detection, there is a lack of research on significant intra-class differences and inter-class similarity of lesion features. At the same time, the larger model size also brings challenges to further algorithm application; In this paper, we proposed a lightweight skin cancer recognition model with feature discrimination based on fine-grained classification principle. The propose model includes two common feature extraction modules of lesion classification network and a feature discrimination network. Firstly, two sets of training samples (positive and negative sample pairs) are input into the feature extraction module (Lightweight CNN) of the recognition model. Then, two sets of feature vectors output from the feature extraction module are used to train the two classification networks and feature discrimination networks of the recognition model at the same time, and the model fusion strategy is applied to further improve the performance of the model, the proposed recognition method can extract more discriminative lesion features and improve the recognition performance of the model in a small amount of model parameters; In addition, based on the feature extraction module of the proposed recognition model, U-Net architecture, and migration training strategy, we build a lightweight semantic segmentation model of lesion area of dermoscopy image, which can achieve high precision lesion area segmentation end-to-end without complicated image preprocessing operation; The performance of our approach was appraised through widespread experiments comparative and feature visualization analysis, the outcome indicates that the proposed method has better performance than the start-of-the-art deep learning-based approach on the ISBI 2016 skin lesion analysis towards melanoma detection challenge dataset

SKINCure: An Innovative Smart Phone-Based Application to Assist in Melanoma Early Detection and Prevention

Melanoma spreads through metastasis, and therefore it has been proven to be very fatal. Statistical evidence has revealed that the majority of deaths resulting from skin cancer are as a result of melanoma. Further investigations have shown that the survival rates in patients depend on the stage of the infection; early detection and intervention of melanoma implicates higher chances of cure. Clinical diagnosis and prognosis of melanoma is challenging since the processes are prone to misdiagnosis and inaccuracies due to doctors’ subjectivity. This paper proposes an innovative and fully functional smart-phone based application to assist in melanoma early detection and prevention. The application has two major components; the first component is a real-time alert to help users prevent skin burn caused by sunlight; a novel equation to compute the time for skin to burn is thereby introduced. The second component is an automated image analysis module which contains image acquisition, hair detection and exclusion, lesion segmentation, feature extraction, and classification. The proposed system exploits PH2 Dermoscopy image database from Pedro Hispano Hospital for development and testing purposes. The image database contains a total of 200 dermoscopy images of lesions, including normal, atypical, and melanoma cases. The experimental results show that the proposed system is efficient, achieving classification of the normal, atypical and melanoma images with accuracy of 96.3%, 95.7% and 97.5%, respectively