Compression of electrocardiograms using wavelets

Orientador: Ivanil Sebastião BonattiDissertação (mestrado) - Universidade Estadual de Campinas, Faculdade de Engenharia Eletrica e de ComputaçãoResumo: A principal contribuição desta dissertação é a proposta de dois métodos de compressão de eletrocardiogramas (ECGs). O primeiro método, chamado Run Length Encoding Adaptativo (RLEA), é baseado nas transformadas wavelet e consiste basicamente em utilizar uma função wavelet, obtida pela resolução de um problema de otimização, que se ajuste ao sinal a ser comprimido. O problema de otimização torna-se irrestrito com a parametrização dos coeficientes do filtro escala, que definem unicamente uma função wavelet. Após a resolução do problema de otimização é aplicado o procedimento de decomposição wavelet no sinal e os coeficientes de representação mais significativos são retidos, sendo que o número de coeficientes retidos é determinado de forma a satisfazer uma medida de distorção pré-especificada. Os coeficientes retidos são então quantizados e compactados, assim como o bitmap que indica as posições dos coeficientes retidos. A quantização é feita de forma adaptativa, utilizando diferentes números de bits de quantização para os diferentes subespaços de decomposição considerados. Tanto os valores dos coeficientes retidos quanto o bitmap são codificados utilizando uma variante do método Run Length Encoding. O segundo método proposto nesta dissertação, chamado Zero Padding Singular Values Decomposition (ZPSVD), consiste em primeiramente detectar os batimentos, equalizá-los pela inserção de zeros (zero padding) e então aplicar a decomposição SVD para obter tanto a base quanto os coeficientes de representação dos batimentos. Alguns componentes da base são retidos e então comprimidos utilizando os mesmos procedimentos aplicados aos coeficientes de decomposição do ECG no método RLEA, enquanto que os coeficientes de projeção dos batimentos nessa base são quantizados utilizando um procedimento de quantização adaptativa. Os dois métodos de compressão propostos são comparados com diversos outros métodos existentes na literatura por meio de experimentos numéricosAbstract: The main contribution of the present thesis is the proposition of two electrocardiogram (ECG) compression methods. The first method, called Run Length Encoding Adaptativo (RLEA), is based on wavelet transforms and consists of using a wavelet function, obtained by the resolution of an optimization problem, which fits to the signal to be compressed. The optimization problem becomes unconstrained with the parametrization of the coefficients of the scaling filter, that define uniquely a wavelet function. After the resolution of the optimization problem, the wavelet decomposition procedure is applied to the signal and the most significant coefficients of representation are retained, being the number of retained coefficients determined in order to satisfty a pre-specified distortion measure. The retained coefficients are quantized and compressed, likewise the bitmap that informs the positions of the retained coefficients. The quantization is performed in an adaptive way, using different numbers of bits for the different decomposition subspaces considered. Both the values of the retained coefficients and the bitmap are encoded using a modi- fied version of the Run Length Encoding technique. The second method proposed in this dissertation, called Zero Padding Singular Values Decomposition (ZPSVD), consists of detecting the beat pulses of the ECG, equalizing the pulses by inserting zeros (zero padding), and finally applying the SVD to obtain both the basis and the coefficients of representation of the beat pulses. Some components of the basis are retained and then compressed using the same procedures applied to the coefficients of decomposition of the ECG in the RLEA method, while the coefficients of projection of the beat pulses in the basis are quantized using an adaptive quantization procedure. Both proposed compression methods are compared to other techniques by means of numerical experimentsMestradoTelecomunicações e TelemáticaMestre em Engenharia Elétric

Artificial Intelligence for Multimedia Signal Processing

Artificial intelligence technologies are also actively applied to broadcasting and multimedia processing technologies. A lot of research has been conducted in a wide variety of fields, such as content creation, transmission, and security, and these attempts have been made in the past two to three years to improve image, video, speech, and other data compression efficiency in areas related to MPEG media processing technology. Additionally, technologies such as media creation, processing, editing, and creating scenarios are very important areas of research in multimedia processing and engineering. This book contains a collection of some topics broadly across advanced computational intelligence algorithms and technologies for emerging multimedia signal processing as: Computer vision field, speech/sound/text processing, and content analysis/information mining

Zero-padding Network Coding and Compressed Sensing for Optimized Packets Transmission

Ubiquitous Internet of Things (IoT) is destined to connect everybody and everything on a never-before-seen scale. Such networks, however, have to tackle the inherent issues created by the presence of very heterogeneous data transmissions over the same shared network. This very diverse communication, in turn, produces network packets of various sizes ranging from very small sensory readings to comparatively humongous video frames. Such a massive amount of data itself, as in the case of sensory networks, is also continuously captured at varying rates and contributes to increasing the load on the network itself, which could hinder transmission efficiency. However, they also open up possibilities to exploit various correlations in the transmitted data due to their sheer number. Reductions based on this also enable the networks to keep up with the new wave of big data-driven communications by simply investing in the promotion of select techniques that efficiently utilize the resources of the communication systems. One of the solutions to tackle the erroneous transmission of data employs linear coding techniques, which are ill-equipped to handle the processing of packets with differing sizes. Random Linear Network Coding (RLNC), for instance, generates unreasonable amounts of padding overhead to compensate for the different message lengths, thereby suppressing the pervasive benefits of the coding itself. We propose a set of approaches that overcome such issues, while also reducing the decoding delays at the same time. Specifically, we introduce and elaborate on the concept of macro-symbols and the design of different coding schemes. Due to the heterogeneity of the packet sizes, our progressive shortening scheme is the first RLNC-based approach that generates and recodes unequal-sized coded packets. Another of our solutions is deterministic shifting that reduces the overall number of transmitted packets. Moreover, the RaSOR scheme employs coding using XORing operations on shifted packets, without the need for coding coefficients, thus favoring linear encoding and decoding complexities. Another facet of IoT applications can be found in sensory data known to be highly correlated, where compressed sensing is a potential approach to reduce the overall transmissions. In such scenarios, network coding can also help. Our proposed joint compressed sensing and real network coding design fully exploit the correlations in cluster-based wireless sensor networks, such as the ones advocated by Industry 4.0. This design focused on performing one-step decoding to reduce the computational complexities and delays of the reconstruction process at the receiver and investigates the effectiveness of combined compressed sensing and network coding

Design of a secure architecture for the exchange of biomedical information in m-Health scenarios

El paradigma de m-Salud (salud móvil) aboga por la integración masiva de las más avanzadas tecnologías de comunicación, red móvil y sensores en aplicaciones y sistemas de salud, para fomentar el despliegue de un nuevo modelo de atención clínica centrada en el usuario/paciente. Este modelo tiene por objetivos el empoderamiento de los usuarios en la gestión de su propia salud (p.ej. aumentando sus conocimientos, promocionando estilos de vida saludable y previniendo enfermedades), la prestación de una mejor tele-asistencia sanitaria en el hogar para ancianos y pacientes crónicos y una notable disminución del gasto de los Sistemas de Salud gracias a la reducción del número y la duración de las hospitalizaciones. No obstante, estas ventajas, atribuidas a las aplicaciones de m-Salud, suelen venir acompañadas del requisito de un alto grado de disponibilidad de la información biomédica de sus usuarios para garantizar una alta calidad de servicio, p.ej. fusionar varias señales de un usuario para obtener un diagnóstico más preciso. La consecuencia negativa de cumplir esta demanda es el aumento directo de las superficies potencialmente vulnerables a ataques, lo que sitúa a la seguridad (y a la privacidad) del modelo de m-Salud como factor crítico para su éxito. Como requisito no funcional de las aplicaciones de m-Salud, la seguridad ha recibido menos atención que otros requisitos técnicos que eran más urgentes en etapas de desarrollo previas, tales como la robustez, la eficiencia, la interoperabilidad o la usabilidad. Otro factor importante que ha contribuido a retrasar la implementación de políticas de seguridad sólidas es que garantizar un determinado nivel de seguridad implica unos costes que pueden ser muy relevantes en varias dimensiones, en especial en la económica (p.ej. sobrecostes por la inclusión de hardware extra para la autenticación de usuarios), en el rendimiento (p.ej. reducción de la eficiencia y de la interoperabilidad debido a la integración de elementos de seguridad) y en la usabilidad (p.ej. configuración más complicada de dispositivos y aplicaciones de salud debido a las nuevas opciones de seguridad). Por tanto, las soluciones de seguridad que persigan satisfacer a todos los actores del contexto de m-Salud (usuarios, pacientes, personal médico, personal técnico, legisladores, fabricantes de dispositivos y equipos, etc.) deben ser robustas y al mismo tiempo minimizar sus costes asociados. Esta Tesis detalla una propuesta de seguridad, compuesta por cuatro grandes bloques interconectados, para dotar de seguridad a las arquitecturas de m-Salud con unos costes reducidos. El primer bloque define un esquema global que proporciona unos niveles de seguridad e interoperabilidad acordes con las características de las distintas aplicaciones de m-Salud. Este esquema está compuesto por tres capas diferenciadas, diseñadas a la medidas de los dominios de m-Salud y de sus restricciones, incluyendo medidas de seguridad adecuadas para la defensa contra las amenazas asociadas a sus aplicaciones de m-Salud. El segundo bloque establece la extensión de seguridad de aquellos protocolos estándar que permiten la adquisición, el intercambio y/o la administración de información biomédica -- por tanto, usados por muchas aplicaciones de m-Salud -- pero no reúnen los niveles de seguridad detallados en el esquema previo. Estas extensiones se concretan para los estándares biomédicos ISO/IEEE 11073 PHD y SCP-ECG. El tercer bloque propone nuevas formas de fortalecer la seguridad de los tests biomédicos, que constituyen el elemento esencial de muchas aplicaciones de m-Salud de carácter clínico, mediante codificaciones novedosas. Finalmente el cuarto bloque, que se sitúa en paralelo a los anteriores, selecciona herramientas genéricas de seguridad (elementos de autenticación y criptográficos) cuya integración en los otros bloques resulta idónea, y desarrolla nuevas herramientas de seguridad, basadas en señal -- embedding y keytagging --, para reforzar la protección de los test biomédicos.The paradigm of m-Health (mobile health) advocates for the massive integration of advanced mobile communications, network and sensor technologies in healthcare applications and systems to foster the deployment of a new, user/patient-centered healthcare model enabling the empowerment of users in the management of their health (e.g. by increasing their health literacy, promoting healthy lifestyles and the prevention of diseases), a better home-based healthcare delivery for elderly and chronic patients and important savings for healthcare systems due to the reduction of hospitalizations in number and duration. It is a fact that many m-Health applications demand high availability of biomedical information from their users (for further accurate analysis, e.g. by fusion of various signals) to guarantee high quality of service, which on the other hand entails increasing the potential surfaces for attacks. Therefore, it is not surprising that security (and privacy) is commonly included among the most important barriers for the success of m-Health. As a non-functional requirement for m-Health applications, security has received less attention than other technical issues that were more pressing at earlier development stages, such as reliability, eficiency, interoperability or usability. Another fact that has contributed to delaying the enforcement of robust security policies is that guaranteeing a certain security level implies costs that can be very relevant and that span along diferent dimensions. These include budgeting (e.g. the demand of extra hardware for user authentication), performance (e.g. lower eficiency and interoperability due to the addition of security elements) and usability (e.g. cumbersome configuration of devices and applications due to security options). Therefore, security solutions that aim to satisfy all the stakeholders in the m-Health context (users/patients, medical staff, technical staff, systems and devices manufacturers, regulators, etc.) shall be robust and, at the same time, minimize their associated costs. This Thesis details a proposal, composed of four interrelated blocks, to integrate appropriate levels of security in m-Health architectures in a cost-efcient manner. The first block designes a global scheme that provides different security and interoperability levels accordingto how critical are the m-Health applications to be implemented. This consists ofthree layers tailored to the m-Health domains and their constraints, whose security countermeasures defend against the threats of their associated m-Health applications. Next, the second block addresses the security extension of those standard protocols that enable the acquisition, exchange and/or management of biomedical information | thus, used by many m-Health applications | but do not meet the security levels described in the former scheme. These extensions are materialized for the biomedical standards ISO/IEEE 11073 PHD and SCP-ECG. Then, the third block proposes new ways of enhancing the security of biomedical standards, which are the centerpiece of many clinical m-Health applications, by means of novel codings. Finally the fourth block, with is parallel to the others, selects generic security methods (for user authentication and cryptographic protection) whose integration in the other blocks results optimal, and also develops novel signal-based methods (embedding and keytagging) for strengthening the security of biomedical tests. The layer-based extensions of the standards ISO/IEEE 11073 PHD and SCP-ECG can be considered as robust, cost-eficient and respectful with their original features and contents. The former adds no attributes to its data information model, four new frames to the service model |and extends four with new sub-frames|, and only one new sub-state to the communication model. Furthermore, a lightweight architecture consisting of a personal health device mounting a 9 MHz processor and an aggregator mounting a 1 GHz processor is enough to transmit a 3-lead electrocardiogram in real-time implementing the top security layer. The extra requirements associated to this extension are an initial configuration of the health device and the aggregator, tokens for identification/authentication of users if these devices are to be shared and the implementation of certain IHE profiles in the aggregator to enable the integration of measurements in healthcare systems. As regards to the extension of SCP-ECG, it only adds a new section with selected security elements and syntax in order to protect the rest of file contents and provide proper role-based access control. The overhead introduced in the protected SCP-ECG is typically 2{13 % of the regular file size, and the extra delays to protect a newly generated SCP-ECG file and to access it for interpretation are respectively a 2{10 % and a 5 % of the regular delays. As regards to the signal-based security techniques developed, the embedding method is the basis for the proposal of a generic coding for tests composed of biomedical signals, periodic measurements and contextual information. This has been adjusted and evaluated with electrocardiogram and electroencephalogram-based tests, proving the objective clinical quality of the coded tests, the capacity of the coding-access system to operate in real-time (overall delays of 2 s for electrocardiograms and 3.3 s for electroencephalograms) and its high usability. Despite of the embedding of security and metadata to enable m-Health services, the compression ratios obtained by this coding range from ' 3 in real-time transmission to ' 5 in offline operation. Complementarily, keytagging permits associating information to images (and other signals) by means of keys in a secure and non-distorting fashion, which has been availed to implement security measures such as image authentication, integrity control and location of tampered areas, private captioning with role-based access control, traceability and copyright protection. The tests conducted indicate a remarkable robustness-capacity tradeoff that permits implementing all this measures simultaneously, and the compatibility of keytagging with JPEG2000 compression, maintaining this tradeoff while setting the overall keytagging delay in only ' 120 ms for any image size | evidencing the scalability of this technique. As a general conclusion, it has been demonstrated and illustrated with examples that there are various, complementary and structured manners to contribute in the implementation of suitable security levels for m-Health architectures with a moderate cost in budget, performance, interoperability and usability. The m-Health landscape is evolving permanently along all their dimensions, and this Thesis aims to do so with its security. Furthermore, the lessons learned herein may offer further guidance for the elaboration of more comprehensive and updated security schemes, for the extension of other biomedical standards featuring low emphasis on security or privacy, and for the improvement of the state of the art regarding signal-based protection methods and applications

SPARSE RECOVERY BY NONCONVEX LIPSHITZIAN MAPPINGS

In recent years, the sparsity concept has attracted considerable attention in areas of applied mathematics and computer science, especially in signal and image processing fields. The general framework of sparse representation is now a mature concept with solid basis in relevant mathematical fields, such as probability, geometry of Banach spaces, harmonic analysis, theory of computability, and information-based complexity. Together with theoretical and practical advancements, also several numeric methods and algorithmic techniques have been developed in order to capture the complexity and the wide scope that the theory suggests. Sparse recovery relays over the fact that many signals can be represented in a sparse way, using only few nonzero coefficients in a suitable basis or overcomplete dictionary. Unfortunately, this problem, also called `0-norm minimization, is not only NP-hard, but also hard to approximate within an exponential factor of the optimal solution. Nevertheless, many heuristics for the problem has been obtained and proposed for many applications. This thesis provides new regularization methods for the sparse representation problem with application to face recognition and ECG signal compression. The proposed methods are based on fixed-point iteration scheme which combines nonconvex Lipschitzian-type mappings with canonical orthogonal projectors. The first are aimed at uniformly enhancing the sparseness level by shrinking effects, the latter to project back into the feasible space of solutions. In the second part of this thesis we study two applications in which sparseness has been successfully applied in recent areas of the signal and image processing: the face recognition problem and the ECG signal compression problem

Diffeomorphic Transformations for Time Series Analysis: An Efficient Approach to Nonlinear Warping

The proliferation and ubiquity of temporal data across many disciplines has sparked interest for similarity, classification and clustering methods specifically designed to handle time series data. A core issue when dealing with time series is determining their pairwise similarity, i.e., the degree to which a given time series resembles another. Traditional distance measures such as the Euclidean are not well-suited due to the time-dependent nature of the data. Elastic metrics such as dynamic time warping (DTW) offer a promising approach, but are limited by their computational complexity, non-differentiability and sensitivity to noise and outliers. This thesis proposes novel elastic alignment methods that use parametric \& diffeomorphic warping transformations as a means of overcoming the shortcomings of DTW-based metrics. The proposed method is differentiable \& invertible, well-suited for deep learning architectures, robust to noise and outliers, computationally efficient, and is expressive and flexible enough to capture complex patterns. Furthermore, a closed-form solution was developed for the gradient of these diffeomorphic transformations, which allows an efficient search in the parameter space, leading to better solutions at convergence. Leveraging the benefits of these closed-form diffeomorphic transformations, this thesis proposes a suite of advancements that include: (a) an enhanced temporal transformer network for time series alignment and averaging, (b) a deep-learning based time series classification model to simultaneously align and classify signals with high accuracy, (c) an incremental time series clustering algorithm that is warping-invariant, scalable and can operate under limited computational and time resources, and finally, (d) a normalizing flow model that enhances the flexibility of affine transformations in coupling and autoregressive layers.Comment: PhD Thesis, defended at the University of Navarra on July 17, 2023. 277 pages, 8 chapters, 1 appendi

Application and Theory of Multimedia Signal Processing Using Machine Learning or Advanced Methods

This Special Issue is a book composed by collecting documents published through peer review on the research of various advanced technologies related to applications and theories of signal processing for multimedia systems using ML or advanced methods. Multimedia signals include image, video, audio, character recognition and optimization of communication channels for networks. The specific contents included in this book are data hiding, encryption, object detection, image classification, and character recognition. Academics and colleagues who are interested in these topics will find it interesting to read

A Zero Padding Svd Encoder To Compress Electrocardiogram

[No abstract available]434Brandeis UniversityWei, J.-J., Chang, C.-J., Chou, N.-K., Jan, G.-J., ECG data compression using truncated singular value decomposition (2001) IEEE Transactions on Information Technology in Biomedicine, 5 (4), pp. 290-299. , De

Intelligent Circuits and Systems

ICICS-2020 is the third conference initiated by the School of Electronics and Electrical Engineering at Lovely Professional University that explored recent innovations of researchers working for the development of smart and green technologies in the fields of Energy, Electronics, Communications, Computers, and Control. ICICS provides innovators to identify new opportunities for the social and economic benefits of society.　 This conference bridges the gap between academics and R&D institutions, social visionaries, and experts from all strata of society to present their ongoing research activities and foster research relations between them. It provides opportunities for the exchange of new ideas, applications, and experiences in the field of smart technologies and finding global partners for future collaboration. The ICICS-2020 was conducted in two broad categories, Intelligent Circuits & Intelligent Systems and Emerging Technologies in Electrical Engineering