A review of technical factors to consider when designing neural networks for semantic segmentation of Earth Observation imagery

Semantic segmentation (classification) of Earth Observation imagery is a crucial task in remote sensing. This paper presents a comprehensive review of technical factors to consider when designing neural networks for this purpose. The review focuses on Convolutional Neural Networks (CNNs), Recurrent Neural Networks (RNNs), Generative Adversarial Networks (GANs), and transformer models, discussing prominent design patterns for these ANN families and their implications for semantic segmentation. Common pre-processing techniques for ensuring optimal data preparation are also covered. These include methods for image normalization and chipping, as well as strategies for addressing data imbalance in training samples, and techniques for overcoming limited data, including augmentation techniques, transfer learning, and domain adaptation. By encompassing both the technical aspects of neural network design and the data-related considerations, this review provides researchers and practitioners with a comprehensive and up-to-date understanding of the factors involved in designing effective neural networks for semantic segmentation of Earth Observation imagery.Comment: 145 pages with 32 figure

Artificial Neural Networks in Agriculture

Modern agriculture needs to have high production efficiency combined with a high quality of obtained products. This applies to both crop and livestock production. To meet these requirements, advanced methods of data analysis are more and more frequently used, including those derived from artificial intelligence methods. Artificial neural networks (ANNs) are one of the most popular tools of this kind. They are widely used in solving various classification and prediction tasks, for some time also in the broadly defined field of agriculture. They can form part of precision farming and decision support systems. Artificial neural networks can replace the classical methods of modelling many issues, and are one of the main alternatives to classical mathematical models. The spectrum of applications of artificial neural networks is very wide. For a long time now, researchers from all over the world have been using these tools to support agricultural production, making it more efficient and providing the highest-quality products possible

Deep learning assisted MRI guided attenuation correction in PET

This thesis was submitted for the degree of Doctor of Philosophy and awarded by Brunel University LondonPositron emission tomography (PET) is a unique imaging modality that provides physiological and functional details of the tissue at the molecular level. However, the acquired PET images have some limitations such as the attenuation. PET attenuation correction is an essential step to obtain the full potential of PET quantification. With the wide use of hybrid PET/MR scanners, magnetic resonance (MR) images are used to address the problem of PET attenuation correction. The MR images segmentation is one simple and robust approach to create pseudo computed tomography (CT) images, which are used to generate attenuation coefficient maps to correct the PET attenuation. Recently, deep learning has been proposed and used as a promising technique to efficiently perform MR and various medical images segmentation. In this research work, deep learning guided segmentation approaches have been proposed to enhance the bone class segmentation of MR brain images in order to generate accurate pseudo-CT images. The first approach has introduced the combination of handcrafted features with deep learning features to enrich the set of features. Multiresolution analysis techniques, which generate multiscale and multidirectional coefficients of an image such as contourlet and shearlet transforms, are applied and combined with deep convolutional neural network (CNN) features. Different experiments have been conducted to investigate the number of selected coefficients and the insertion location of the handcrafted features. The second approach aims at reducing the segmentation algorithm’s complexity while maintaining the segmentation performance. An attention based convolutional encode-decoder network has been proposed to adaptively recalibrate the deep network features. This attention based network consists of two different squeeze and excitation blocks that excite the features spatially and channel wise. The two blocks are combined sequentially to decrease the number of network’s parameters and reduces the model complexity. The third approach has been focuses on the application of transfer learning from different MR sequences such as T1 weighted (T1-w) and T2 weighted (T2-w) images. A pretrained model with T1-w MR sequences is fine tuned to perform the segmentation of T2-w images. Multiple fine tuning approaches and experiments have been conducted to study the best fine tuning mechanism that is able to build an efficient segmentation model for both T1-w and T2-w segmentation. Clinical datasets of fifty patients with different conditions and diagnosis have been used to carry an objective evaluation to measure the segmentation performance of the results obtained by the three proposed methods. The first and second approaches have been validated with other studies in the literature that applied deep network based segmentation technique to perform MR based attenuation correction for PET images. The proposed methods have shown an enhancement in the bone segmentation with an increase of dice similarity coefficient (DSC) from 0.6179 to 0.6567 using an ensemble of CNNs with an improvement percentage of 6.3%. The proposed excitation-based CNN has decreased the model complexity by decreasing the number of trainable parameters by more than 46% where less computing resources are required to train the model. The proposed hybrid transfer learning method has shown its superiority to build a multi-sequences (T1-w and T2-w) segmentation approach compared to other applied transfer learning methods especially with the bone class where the DSC is increased from 0.3841 to 0.5393. Moreover, the hybrid transfer learning approach requires less computing time than transfer learning using open and conservative fine tuning

Active Learning for Reducing Labeling Effort in Text Classification Tasks

Labeling data can be an expensive task as it is usually performed manually by domain experts. This is cumbersome for deep learning, as it is dependent on large labeled datasets. Active learning (AL) is a paradigm that aims to reduce labeling effort by only using the data which the used model deems most informative. Little research has been done on AL in a text classification setting and next to none has involved the more recent, state-of-the-art Natural Language Processing (NLP) models. Here, we present an empirical study that compares different uncertainty-based algorithms with BERT$_{base}$ as the used classifier. We evaluate the algorithms on two NLP classification datasets: Stanford Sentiment Treebank and KvK-Frontpages. Additionally, we explore heuristics that aim to solve presupposed problems of uncertainty-based AL; namely, that it is unscalable and that it is prone to selecting outliers. Furthermore, we explore the influence of the query-pool size on the performance of AL. Whereas it was found that the proposed heuristics for AL did not improve performance of AL; our results show that using uncertainty-based AL with BERT$_{base}$ outperforms random sampling of data. This difference in performance can decrease as the query-pool size gets larger.Comment: Accepted as a conference paper at the joint 33rd Benelux Conference on Artificial Intelligence and the 30th Belgian Dutch Conference on Machine Learning (BNAIC/BENELEARN 2021). This camera-ready version submitted to BNAIC/BENELEARN, adds several improvements including a more thorough discussion of related work plus an extended discussion section. 28 pages including references and appendice

An intelligent classification system for land use and land cover mapping using spaceborne remote sensing and GIS

The objectives of this study were to experiment with and extend current methods of Synthetic Aperture Rader (SAR) image classification, and to design and implement a prototype intelligent remote sensing image processing and classification system for land use and land cover mapping in wet season conditions in Bangladesh, which incorporates SAR images and other geodata. To meet these objectives, the problem of classifying the spaceborne SAR images, and integrating Geographic Information System (GIS) data and ground truth data was studied first. In this phase of the study, an extension to traditional techniques was made by applying a Self-Organizing feature Map (SOM) to include GIS data with the remote sensing data during image segmentation. The experimental results were compared with those of traditional statistical classifiers, such as Maximum Likelihood, Mahalanobis Distance, and Minimum Distance classifiers. The performances of the classifiers were evaluated in terms of the classification accuracy with respect to the collected real-time ground truth data. The SOM neural network provided the highest overall accuracy when a GIS layer of land type classification (with respect to the period of inundation by regular flooding) was used in the network. Using this method, the overall accuracy was around 15% higher than the previously mentioned traditional classifiers. It also achieved higher accuracies for more classes in comparison to the other classifiers. However, it was also observed that different classifiers produced better accuracy for different classes. Therefore, the investigation was extended to consider Multiple Classifier Combination (MCC) techniques, which is a recently emerging research area in pattern recognition. The study has tested some of these techniques to improve the classification accuracy by harnessing the goodness of the constituent classifiers. A Rule-based Contention Resolution method of combination was developed, which exhibited an improvement in the overall accuracy of about 2% in comparison to its best constituent (SOM) classifier. The next phase of the study involved the design of an architecture for an intelligent image processing and classification system (named ISRIPaC) that could integrate the extended methodologies mentioned above. Finally, the architecture was implemented in a prototype and its viability was evaluated using a set of real data. The originality of the ISRIPaC architecture lies in the realisation of the concept of a complete system that can intelligently cover all the steps of image processing classification and utilise standardised metadata in addition to a knowledge base in determining the appropriate methods and course of action for the given task. The implemented prototype of the ISRIPaC architecture is a federated system that integrates the CLIPS expert system shell, the IDRISI Kilimanjaro image processing and GIS software, and the domain experts' knowledge via a control agent written in Visual C++. It starts with data assessment and pre-processing and ends up with image classification and accuracy assessment. The system is designed to run automatically, where the user merely provides the initial information regarding the intended task and the source of available data. The system itself acquires necessary information about the data from metadata files in order to make decisions and perform tasks. The test and evaluation of the prototype demonstrates the viability of the proposed architecture and the possibility of extending the system to perform other image processing tasks and to use different sources of data. The system design presented in this study thus suggests some directions for the development of the next generation of remote sensing image processing and classification systems

Machine Learning Methods with Noisy, Incomplete or Small Datasets

In many machine learning applications, available datasets are sometimes incomplete, noisy or affected by artifacts. In supervised scenarios, it could happen that label information has low quality, which might include unbalanced training sets, noisy labels and other problems. Moreover, in practice, it is very common that available data samples are not enough to derive useful supervised or unsupervised classifiers. All these issues are commonly referred to as the low-quality data problem. This book collects novel contributions on machine learning methods for low-quality datasets, to contribute to the dissemination of new ideas to solve this challenging problem, and to provide clear examples of application in real scenarios

Exploiting Spatio-Temporal Coherence for Video Object Detection in Robotics

This paper proposes a method to enhance video object detection for indoor environments in robotics. Concretely, it exploits knowledge about the camera motion between frames to propagate previously detected objects to successive frames. The proposal is rooted in the concepts of planar homography to propose regions of interest where to find objects, and recursive Bayesian filtering to integrate observations over time. The proposal is evaluated on six virtual, indoor environments, accounting for the detection of nine object classes over a total of ∼ 7k frames. Results show that our proposal improves the recall and the F1-score by a factor of 1.41 and 1.27, respectively, as well as it achieves a significant reduction of the object categorization entropy (58.8%) when compared to a two-stage video object detection method used as baseline, at the cost of small time overheads (120 ms) and precision loss (0.92).</p

Remote Sensing in Mangroves

The book highlights recent advancements in the mapping and monitoring of mangrove forests using earth observation satellite data. New and historical satellite data and aerial photographs have been used to map the extent, change and bio-physical parameters, such as phenology and biomass. Research was conducted in different parts of the world. Knowledge and understanding gained from this book can be used for the sustainable management of mangrove forests of the worl

Mapping (Dis-)Information Flow about the MH17 Plane Crash

Digital media enables not only fast sharing of information, but also disinformation. One prominent case of an event leading to circulation of disinformation on social media is the MH17 plane crash. Studies analysing the spread of information about this event on Twitter have focused on small, manually annotated datasets, or used proxys for data annotation. In this work, we examine to what extent text classifiers can be used to label data for subsequent content analysis, in particular we focus on predicting pro-Russian and pro-Ukrainian Twitter content related to the MH17 plane crash. Even though we find that a neural classifier improves over a hashtag based baseline, labeling pro-Russian and pro-Ukrainian content with high precision remains a challenging problem. We provide an error analysis underlining the difficulty of the task and identify factors that might help improve classification in future work. Finally, we show how the classifier can facilitate the annotation task for human annotators