An improved wrapper-based feature selection method for machinery fault diagnosis

A major issue of machinery fault diagnosis using vibration signals is that it is over-reliant on personnel knowledge and experience in interpreting the signal. Thus, machine learning has been adapted for machinery fault diagnosis. The quantity and quality of the input features, however, influence the fault classification performance. Feature selection plays a vital role in selecting the most representative feature subset for the machine learning algorithm. In contrast, the trade-off relationship between capability when selecting the best feature subset and computational effort is inevitable in the wrapper-based feature selection (WFS) method. This paper proposes an improved WFS technique before integration with a support vector machine (SVM) model classifier as a complete fault diagnosis system for a rolling element bearing case study. The bearing vibration dataset made available by the Case Western Reserve University Bearing Data Centre was executed using the proposed WFS and its performance has been analysed and discussed. The results reveal that the proposed WFS secures the best feature subset with a lower computational effort by eliminating the redundancy of re-evaluation. The proposed WFS has therefore been found to be capable and efficient to carry out feature selection tasks

Memetic micro-genetic algorithms for cancer data classification

Fast and precise medical diagnosis of human cancer is crucial for treatment decisions. Gene selection consists of identifying a set of informative genes from microarray data to allow high predictive accuracy in human cancer classification. This task is a combinatorial search problem, and optimisation methods can be applied for its resolution. In this paper, two memetic micro-genetic algorithms (MμV1 and MμV2) with different hybridisation approaches are proposed for feature selection of cancer microarray data. Seven gene expression datasets are used for experimentation. The comparison with stochastic state-of-the-art optimisation techniques concludes that problem-dependent local search methods combined with micro-genetic algorithms improve feature selection of cancer microarray data.Fil: Rojas, Matias Gabriel. Universidad Nacional de Lujan. Centro de Investigacion Docencia y Extension En Tecnologias de la Informacion y Las Comunicaciones.; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza; ArgentinaFil: Olivera, Ana Carolina. Universidad Nacional de Cuyo. Facultad de Ingeniería; Argentina. Universidad Nacional de Lujan. Centro de Investigacion Docencia y Extension En Tecnologias de la Informacion y Las Comunicaciones.; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza; ArgentinaFil: Carballido, Jessica Andrea. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca. Instituto de Ciencias e Ingeniería de la Computación; ArgentinaFil: Vidal, Pablo Javier. Universidad Nacional de Cuyo. Facultad de Ingeniería; Argentina. Universidad Nacional del Sur. Departamento de Ciencias e Ingeniería de la Computación; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza; Argentin

Method for the extraction of shock signal features based on the upper limit of density integral

Shock signal features must be extracted for use in pattern recognition or fault diagnosis. In this work, we proposed a method for the feature extraction of shock signals, which are vibration signals that change faster and have larger amplitude ranges than general signals. First, we proposed the concepts of amplitude density for monotonic functions and piecewise monotonic functions. On the basis of these concepts, we then proposed the concept of the upper limit of density integral (ULDI), which was adopted to obtain signal features. Then, we introduced two types of serious fault cracks to the latch sheet of an automatic gun mechanism that is used on warships. Next, we applied the proposed method to extract the features of shock signals from data acquired when the automatic gun mechanism fired with normal and two fault patterns. Finally, we verified the effectiveness of our proposed method by applying the features that it extracted to a support vector machine (SVM). Our proposed method provided good results and was superior to the traditional statistics-based feature extraction method when applied to a SVM for classification. In addition, the former method demonstrated better generalisation than the latter. Thus, our method is an efficient approach for extracting shock signal features in pattern recognition and fault diagnosis

Binary Competitive Swarm Optimizer Approaches For Feature Selection

Feature selection is known as an NP-hard combinatorial problem in which the possible feature subsets increase exponentially with the number of features. Due to the increment of the feature size, the exhaustive search has become impractical. In addition, a feature set normally includes irrelevant, redundant, and relevant information. Therefore, in this paper, binary variants of a competitive swarm optimizer are proposed for wrapper feature selection. The proposed approaches are used to select a subset of significant features for classification purposes. The binary version introduced here is performed by employing the S-shaped and V-shaped transfer functions, which allows the search agents to move on the binary search space. The proposed approaches are tested by using 15 benchmark datasets collected from the UCI machine learning repository, and the results are compared with other conventional feature selection methods. Our results prove the capability of the proposed binary version of the competitive swarm optimizer not only in terms of high classification performance, but also low computational cost

Phylogenomics of Lanternfishes and the Evolution of Feeding Structures

Mechanisms of speciation in the deep-sea, an environment with few physical isolating barriers, are relatively understudied in deep-sea fishes. This research focuses on the lanternfishes (Myctophiformes ~250 species) as a study system to investigate speciation in deep-sea environments and to test new phylogenomic approaches at resolving contested phylogenetic relationships. Previous phylogenetic hypotheses of lanternfishes identify two monophyletic families (Myctophidae and Neoscopelidae) and two monophyletic subfamilies within Myctophidae (Myctophine and Lampanyctinae), based on morphological and molecular data. Although subfamily relationships have generally remained the same, hypotheses of higher order (tribe, genus, species) relationships lack resolution. This study is the first to infer the evolutionary relationships of lanternfishes with a genome scale target-enrichment approach with ultraconserved elements (UCEs), which are noncoding areas of the genome that are highly conserved across distantly related taxa. Our results infer a phylogeny of lanternfishes that includes a monophyletic Neoscopelidae, a monophyletic Myctophinae, and a paraphyletic Lampanyctinae. We elevate two tribes to subfamilies (Gymnoscopelinae and Diaphinae both previously within Lampanyctinae) in addition to Lampanyctinae and Myctophinae. Gymnoscopelinae was resolved as the stem myctophid group and Diaphinae as sister to Myctophinae. Little is known regarding how lanternfish achieved such high species richness in the deep sea, and many studies have focused on their bioluminescence. This study also focuses on the evolution of feeding structures in lanternfishes and the potential for niche differentiation in this group. Geometric morphometrics were performed on 955 lanternfish specimens, and an ancestral character-state reconstruction was used to examine patterns of evolution in mouth size in lanternfishes. We identify that mouth size in lanternfishes is highly variable, with general trends towards larger mouths in Lampanyctinae and Gymnoscopelinae and shorter mouths in Myctophinae. Of particular note, Diaphinae was found to occupy a large range of morphospace, with broad plasticity in mouth size among the examined species. To further investigate the evolution of feeding structures, we examined 229 lanternfish specimens within Myctophiformes, assessing variation in tooth anatomy, presence on tooth bearing bones, and presence of heterodonty. An ancestral character-state reconstruction was also used to examine the evolution of heterodonty in this group. Our results support at least four separate evolutions of heterodonty in lanternfishes. Once in the common ancestor of the tribe Lampanyctini, once in Diogenichthys, once in Centrobranchus, and possible multiple evolutions in Diaphus. Heterodonty tooth types are expressed by four different anatomical variations around a global ‘hook’ shape, which have allowed for specialization in feeding

Categorical Ontology of Complex Systems, Meta-Systems and Theory of Levels: The Emergence of Life, Human Consciousness and Society

Single cell interactomics in simpler organisms, as well as somatic cell interactomics in multicellular organisms, involve biomolecular interactions in complex signalling pathways that were recently represented in modular terms by quantum automata with ‘reversible behavior’ representing normal cell cycling and division. Other implications of such quantum automata, modular modeling of signaling pathways and cell differentiation during development are in the fields of neural plasticity and brain development leading to quantum-weave dynamic patterns and specific molecular processes underlying extensive memory, learning, anticipation mechanisms and the emergence of human consciousness during the early brain development in children. Cell interactomics is here represented for the first time as a mixture of ‘classical’ states that determine molecular dynamics subject to Boltzmann statistics and ‘steady-state’, metabolic (multi-stable) manifolds, together with ‘configuration’ spaces of metastable quantum states emerging from complex quantum dynamics of interacting networks of biomolecules, such as proteins and nucleic acids that are now collectively defined as quantum interactomics. On the other hand, the time dependent evolution over several generations of cancer cells --that are generally known to undergo frequent and extensive genetic mutations and, indeed, suffer genomic transformations at the chromosome level (such as extensive chromosomal aberrations found in many colon cancers)-- cannot be correctly represented in the ‘standard’ terms of quantum automaton modules, as the normal somatic cells can. This significant difference at the cancer cell genomic level is therefore reflected in major changes in cancer cell interactomics often from one cancer cell ‘cycle’ to the next, and thus it requires substantial changes in the modeling strategies, mathematical tools and experimental designs aimed at understanding cancer mechanisms. Novel solutions to this important problem in carcinogenesis are proposed and experimental validation procedures are suggested. From a medical research and clinical standpoint, this approach has important consequences for addressing and preventing the development of cancer resistance to medical therapy in ongoing clinical trials involving stage III cancer patients, as well as improving the designs of future clinical trials for cancer treatments.\ud \ud \ud KEYWORDS: Emergence of Life and Human Consciousness;\ud Proteomics; Artificial Intelligence; Complex Systems Dynamics; Quantum Automata models and Quantum Interactomics; quantum-weave dynamic patterns underlying human consciousness; specific molecular processes underlying extensive memory, learning, anticipation mechanisms and human consciousness; emergence of human consciousness during the early brain development in children; Cancer cell ‘cycling’; interacting networks of proteins and nucleic acids; genetic mutations and chromosomal aberrations in cancers, such as colon cancer; development of cancer resistance to therapy; ongoing clinical trials involving stage III cancer patients’ possible improvements of the designs for future clinical trials and cancer treatments. \ud \u