Automatic classification of cancer tumors using image annotations and ontologies

Information about cancer stage in a patient is crucial when clinicians assess treatment progress. Determining cancer stage is a process that takes into account the description, location, characteristics and possible metastasis of cancerous tumors in a patient. It should follow classification standards, such as TNM Classification of Malignant Tumors. However, in clinical practice, the implementation of this process can be tedious and error-prone and create uncertainty. In order to alleviate these problems, we intend to assist radiologists by providing a second opinion in the evaluation of cancer stage in patients. For doing this, SemanticWeb technologies, such as ontologies and reasoning, will be used to automatically classify cancer stages. This classification will use semantic annotations, made by radiologists (using the ePAD tool) and stored in the AIM format, and rules of an ontology representing the TNM standard. The whole process will be validated through a proof of concept with users from the Radiology Dept. of the Stanford University.National Council for Scientific and Technological Development - CNPqCAPE

A general cognitive framework for context-aware systems: extensions and applications for high level information fusion approaches

Mención Internacional en el título de doctorContext-aware systems aims at the development of computational systems that process data acquired from different datasources and adapt their behaviour in order to provide the 'right' information, at the 'right' time, in the 'right' place, in the 'right' way to the 'right' person (Fischer, 2012). Traditionally computational research has tried to answer these needs by means of low-level algorithms. In the last years the combination of numeric and symbolic approaches has offered the opportunity to create systems to deal with these issues. However, although the performance of algorithms and the quality of the data directly provided by computers and devices has quickly improved, symbolic models used to represent the resulting knowledge have not yet been adapted to smart environments. This lack of representation does not allow to take advantage of the semantic quality of the information provided by new sensors. This dissertation proposes a set of extensions and applications focused on a cognitive framework for the implementation of context-aware systems based on a general model inspired by the Information Fusion paradigm. This model is stepped in several abstraction levels from low-level raw data to high level scene interpretation whose structure is determined by a set of ontologies. Each ontology level provides a skeleton that includes general concepts and relations to describe entities and their connections. This structure has been designed to promote extensibility and modularity, and might be refined to apply this model in specific domains. This framework combines a priori context knowledge represented with ontologies with real data coming from sensors to support logic-based high-level interpretation of the current situation and to automatically generate feedback recommendations to adjust data acquisition procedures. This work advocates for the introduction of general purpose cognitive layers in order to obtain a closer representation to the human cognition, generate additional knowledge and improve the high-level interpretation. Extensibility and adaptability of the basic ontology levels is demonstrated with the introduction of these traverse semantic layers which are able to be present and represent information at several granularity levels of knowledge using a common formalism. Context-based system must be able to reason about uncertainty. However the reasoning associated to ontologies has been limited to classical description logic mechanisms. This research also tackle the problem of reasoning under uncertainty circumstances through a logic-based paradigm for abductive reasoning: the Belief-Argumentation System. The main contribution of this dissertation is the adaptation of the general architecture and the theoretical proposals to several context-aware application areas such as Ambient Intelligence, Social Signal Processing and surveillance systems. The implementation of prototypes and examples for these areas are explained along this dissertation to progressively illustrate the improvements and extensions in the framework. To initially depict the general model, its components and the basic reasoning mechanisms a video-based Ambient Intelligence application is presented. The advantages and features of the framework extensions through traverse cognitive layers are demonstrated in a Social Signal Processing case for the elaboration of automatic market researches. Finally, the functioning of the system under uncertainty circumstances is illustrated with several examples to support decision makers in the detection of potential threats in common harbor scenarios.Programa Oficial de Doctorado en Ciencia y Tecnología InformáticaPresidente: José Manuel Molina López.- Secretario: Ángel Arroyo.- Vocal: Nayat Sánchez P

Example Based Caricature Synthesis

The likeness of a caricature to the original face image is an essential and often overlooked part of caricature production. In this paper we present an example based caricature synthesis technique, consisting of shape exaggeration, relationship exaggeration, and optimization for likeness. Rather than relying on a large training set of caricature face pairs, our shape exaggeration step is based on only one or a small number of examples of facial features. The relationship exaggeration step introduces two definitions which facilitate global facial feature synthesis. The first is the T-Shape rule, which describes the relative relationship between the facial elements in an intuitive manner. The second is the so called proportions, which characterizes the facial features in a proportion form. Finally we introduce a similarity metric as the likeness metric based on the Modified Hausdorff Distance (MHD) which allows us to optimize the configuration of facial elements, maximizing likeness while satisfying a number of constraints. The effectiveness of our algorithm is demonstrated with experimental results

Front-Line Physicians' Satisfaction with Information Systems in Hospitals

Day-to-day operations management in hospital units is difficult due to continuously varying situations, several actors involved and a vast number of information systems in use. The aim of this study was to describe front-line physicians' satisfaction with existing information systems needed to support the day-to-day operations management in hospitals. A cross-sectional survey was used and data chosen with stratified random sampling were collected in nine hospitals. Data were analyzed with descriptive and inferential statistical methods. The response rate was 65 % (n = 111). The physicians reported that information systems support their decision making to some extent, but they do not improve access to information nor are they tailored for physicians. The respondents also reported that they need to use several information systems to support decision making and that they would prefer one information system to access important information. Improved information access would better support physicians' decision making and has the potential to improve the quality of decisions and speed up the decision making process.Peer reviewe

Improving Access and Mental Health for Youth Through Virtual Models of Care

The overall objective of this research is to evaluate the use of a mobile health smartphone application (app) to improve the mental health of youth between the ages of 14–25 years, with symptoms of anxiety/depression. This project includes 115 youth who are accessing outpatient mental health services at one of three hospitals and two community agencies. The youth and care providers are using eHealth technology to enhance care. The technology uses mobile questionnaires to help promote self-assessment and track changes to support the plan of care. The technology also allows secure virtual treatment visits that youth can participate in through mobile devices. This longitudinal study uses participatory action research with mixed methods. The majority of participants identified themselves as Caucasian (66.9%). Expectedly, the demographics revealed that Anxiety Disorders and Mood Disorders were highly prevalent within the sample (71.9% and 67.5% respectively). Findings from the qualitative summary established that both staff and youth found the software and platform beneficial

The Impact of Digital Technologies on Public Health in Developed and Developing Countries

This open access book constitutes the refereed proceedings of the 18th International Conference on String Processing and Information Retrieval, ICOST 2020, held in Hammamet, Tunisia, in June 2020.* The 17 full papers and 23 short papers presented in this volume were carefully reviewed and selected from 49 submissions. They cover topics such as: IoT and AI solutions for e-health; biomedical and health informatics; behavior and activity monitoring; behavior and activity monitoring; and wellbeing technology. *This conference was held virtually due to the COVID-19 pandemic

Contextual Social Networking

The thesis centers around the multi-faceted research question of how contexts may be detected and derived that can be used for new context aware Social Networking services and for improving the usefulness of existing Social Networking services, giving rise to the notion of Contextual Social Networking. In a first foundational part, we characterize the closely related fields of Contextual-, Mobile-, and Decentralized Social Networking using different methods and focusing on different detailed aspects. A second part focuses on the question of how short-term and long-term social contexts as especially interesting forms of context for Social Networking may be derived. We focus on NLP based methods for the characterization of social relations as a typical form of long-term social contexts and on Mobile Social Signal Processing methods for deriving short-term social contexts on the basis of geometry of interaction and audio. We furthermore investigate, how personal social agents may combine such social context elements on various levels of abstraction. The third part discusses new and improved context aware Social Networking service concepts. We investigate special forms of awareness services, new forms of social information retrieval, social recommender systems, context aware privacy concepts and services and platforms supporting Open Innovation and creative processes. This version of the thesis does not contain the included publications because of copyrights of the journals etc. Contact in terms of the version with all included publications: Georg Groh, [email protected] zentrale Gegenstand der vorliegenden Arbeit ist die vielschichtige Frage, wie Kontexte detektiert und abgeleitet werden können, die dazu dienen können, neuartige kontextbewusste Social Networking Dienste zu schaffen und bestehende Dienste in ihrem Nutzwert zu verbessern. Die (noch nicht abgeschlossene) erfolgreiche Umsetzung dieses Programmes führt auf ein Konzept, das man als Contextual Social Networking bezeichnen kann. In einem grundlegenden ersten Teil werden die eng zusammenhängenden Gebiete Contextual Social Networking, Mobile Social Networking und Decentralized Social Networking mit verschiedenen Methoden und unter Fokussierung auf verschiedene Detail-Aspekte näher beleuchtet und in Zusammenhang gesetzt. Ein zweiter Teil behandelt die Frage, wie soziale Kurzzeit- und Langzeit-Kontexte als für das Social Networking besonders interessante Formen von Kontext gemessen und abgeleitet werden können. Ein Fokus liegt hierbei auf NLP Methoden zur Charakterisierung sozialer Beziehungen als einer typischen Form von sozialem Langzeit-Kontext. Ein weiterer Schwerpunkt liegt auf Methoden aus dem Mobile Social Signal Processing zur Ableitung sinnvoller sozialer Kurzzeit-Kontexte auf der Basis von Interaktionsgeometrien und Audio-Daten. Es wird ferner untersucht, wie persönliche soziale Agenten Kontext-Elemente verschiedener Abstraktionsgrade miteinander kombinieren können. Der dritte Teil behandelt neuartige und verbesserte Konzepte für kontextbewusste Social Networking Dienste. Es werden spezielle Formen von Awareness Diensten, neue Formen von sozialem Information Retrieval, Konzepte für kontextbewusstes Privacy Management und Dienste und Plattformen zur Unterstützung von Open Innovation und Kreativität untersucht und vorgestellt. Diese Version der Habilitationsschrift enthält die inkludierten Publikationen zurVermeidung von Copyright-Verletzungen auf Seiten der Journals u.a. nicht. Kontakt in Bezug auf die Version mit allen inkludierten Publikationen: Georg Groh, [email protected]

The Impact of Digital Technologies on Public Health in Developed and Developing Countries

This open access book constitutes the refereed proceedings of the 18th International Conference on String Processing and Information Retrieval, ICOST 2020, held in Hammamet, Tunisia, in June 2020.* The 17 full papers and 23 short papers presented in this volume were carefully reviewed and selected from 49 submissions. They cover topics such as: IoT and AI solutions for e-health; biomedical and health informatics; behavior and activity monitoring; behavior and activity monitoring; and wellbeing technology. *This conference was held virtually due to the COVID-19 pandemic