9,597 research outputs found
A virtual imaging platform for multi-modality medical image simulation.
International audienceThis paper presents the Virtual Imaging Platform (VIP), a platform accessible at http://vip.creatis.insa-lyon.fr to facilitate the sharing of object models and medical image simulators, and to provide access to distributed computing and storage resources. A complete overview is presented, describing the ontologies designed to share models in a common repository, the workflow template used to integrate simulators, and the tools and strategies used to exploit computing and storage resources. Simulation results obtained in four image modalities and with different models show that VIP is versatile and robust enough to support large simulations. The platform currently has 200 registered users who consumed 33 years of CPU time in 2011
A Semantic Grid Service for Experimentation with an Agent-Based Model of Land-Use Change
Agent-based models, perhaps more than other models, feature large numbers of parameters and potentially generate vast quantities of results data. This paper shows through the FEARLUS-G project (an ESRC e-Social Science Initiative Pilot Demonstrator Project) how deploying an agent-based model on the Semantic Grid facilitates international collaboration on investigations using such a model, and contributes to establishing rigorous working practices with agent-based models as part of good science in social simulation. The experimental workflow is described explicitly using an ontology, and a Semantic Grid service with a web interface implements the workflow. Users are able to compare their parameter settings and results, and relate their work with the model to wider scientific debate.Agent-Based Social Simulation, Experiments, Ontologies, Replication, Semantic Grid
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Challenges of ultra large scale integration of biomedical computing systems
The NCRI Informatics Initiative is overseeing the implementation of an informatics
framework for the UK cancer research community. The framework advocates an integrated
multidisciplinary method of working between scientific and medical communities. Key to this
process is community adoption of high quality acquisition, storage, sharing and integration of
diverse data elements to improve knowledge of the causes, prevention and treatment of
cancer. The integration of the complex data and meta-data used by these multiple
communities is a significant challenge and there are technical, resource-based and
sociological issues to be addressed. In this paper we review progress aimed at establishing
the framework and outline key challenges in ultra large scale integration of biomedical
computing systems
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Grid-based semantic integration of heterogeneous data resources: Implementation on a HealthGrid
This thesis was submitted for the degree of Doctor of Philosophy and was awarded by Brunel University.The semantic integration of geographically distributed and heterogeneous data
resources still remains a key challenge in Grid infrastructures. Today's
mainstream Grid technologies hold the promise to meet this challenge in a
systematic manner, making data applications more scalable and manageable. The
thesis conducts a thorough investigation of the problem, the state of the art, and
the related technologies, and proposes an Architecture for Semantic Integration of
Data Sources (ASIDS) addressing the semantic heterogeneity issue. It defines a
simple mechanism for the interoperability of heterogeneous data sources in order
to extract or discover information regardless of their different semantics. The
constituent technologies of this architecture include Globus Toolkit (GT4) and
OGSA-DAI (Open Grid Service Architecture Data Integration and Access)
alongside other web services technologies such as XML (Extensive Markup
Language). To show this, the ASIDS architecture was implemented and tested in a
realistic setting by building an exemplar application prototype on a HealthGrid
(pilot implementation).
The study followed an empirical research methodology and was informed by
extensive literature surveys and a critical analysis of the relevant technologies and
their synergies. The two literature reviews, together with the analysis of the
technology background, have provided a good overview of the current Grid and
HealthGrid landscape, produced some valuable taxonomies, explored new paths
by integrating technologies, and more importantly illuminated the problem and
guided the research process towards a promising solution. Yet the primary
contribution of this research is an approach that uses contemporary Grid
technologies for integrating heterogeneous data resources that have semantically
different. data fields (attributes). It has been practically demonstrated (using a
prototype HealthGrid) that discovery in semantically integrated distributed data
sources can be feasible by using mainstream Grid technologies, which have been
shown to have some Significant advantages over non-Grid based approaches
Training of Crisis Mappers and Map Production from Multi-sensor Data: Vernazza Case Study (Cinque Terre National Park, Italy)
This aim of paper is to presents the development of a multidisciplinary project carried out by the cooperation between Politecnico di Torino and ITHACA (Information Technology for Humanitarian Assistance, Cooperation and Action). The goal of the project was the training in geospatial data acquiring and processing for students attending Architecture and Engineering Courses, in order to start up a team of "volunteer mappers". Indeed, the project is aimed to document the environmental and built heritage subject to disaster; the purpose is to improve the capabilities of the actors involved in the activities connected in geospatial data collection, integration and sharing. The proposed area for testing the training activities is the Cinque Terre National Park, registered in the World Heritage List since 1997. The area was affected by flood on the 25th of October 2011. According to other international experiences, the group is expected to be active after emergencies in order to upgrade maps, using data acquired by typical geomatic methods and techniques such as terrestrial and aerial Lidar, close-range and aerial photogrammetry, topographic and GNSS instruments etc.; or by non conventional systems and instruments such us UAV, mobile mapping etc. The ultimate goal is to implement a WebGIS platform to share all the data collected with local authorities and the Civil Protectio
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