The Spatial Historian: Creating a Spatially Aware Historical Research System

The intent of this study is to design a geospatial information system capable of facilitating the extraction and analysis of the fragmentary snapshots of history contained in hand-written historical documents. This customized system necessarily bypasses off-the-shelf GIS in order to support these unstructured primary historical research materials and bring long dormant spatial stories previously hidden in archives, libraries, and other documentary storage locations to life. The software platform discussed here integrates the tasks of information extraction, data management, and analysis while simultaneously giving primary emphasis to supporting the spatial and humanistic analysis and interpretation of the data contents. The premise of this research study is that by integrating the collection of data, the extraction of content, and the analysis of information from what has traditionally been post-data collection analysis and research process, more efficient processing and more effective historical research can be achieved

Astrolabe: Curating, Linking and Computing Astronomy's Dark Data

Where appropriate repositories are not available to support all relevant astronomical data products, data can fall into darkness: unseen and unavailable for future reference and re-use. Some data in this category are legacy or old data, but newer datasets are also often uncurated and could remain "dark". This paper provides a description of the design motivation and development of Astrolabe, a cyberinfrastructure project that addresses a set of community recommendations for locating and ensuring the long-term curation of dark or otherwise at-risk data and integrated computing. This paper also describes the outcomes of the series of community workshops that informed creation of Astrolabe. According to participants in these workshops, much astronomical dark data currently exist that are not curated elsewhere, as well as software that can only be executed by a few individuals and therefore becomes unusable because of changes in computing platforms. Astronomical research questions and challenges would be better addressed with integrated data and computational resources that fall outside the scope of existing observatory and space mission projects. As a solution, the design of the Astrolabe system is aimed at developing new resources for management of astronomical data. The project is based in CyVerse cyberinfrastructure technology and is a collaboration between the University of Arizona and the American Astronomical Society. Overall the project aims to support open access to research data by leveraging existing cyberinfrastructure resources and promoting scientific discovery by making potentially-useful data in a computable format broadly available to the astronomical community.Comment: Accepted for publication in the Astrophysical Journal Supplement Series, 22 pages, 2 figure

Proceedings of the 12th International Conference on Digital Preservation

The 12th International Conference on Digital Preservation (iPRES) was held on November 2-6, 2015 in Chapel Hill, North Carolina, USA. There were 327 delegates from 22 countries. The program included 12 long papers, 15 short papers, 33 posters, 3 demos, 6 workshops, 3 tutorials and 5 panels, as well as several interactive sessions and a Digital Preservation Showcase

Proceedings of the 12th International Conference on Digital Preservation

The 12th International Conference on Digital Preservation (iPRES) was held on November 2-6, 2015 in Chapel Hill, North Carolina, USA. There were 327 delegates from 22 countries. The program included 12 long papers, 15 short papers, 33 posters, 3 demos, 6 workshops, 3 tutorials and 5 panels, as well as several interactive sessions and a Digital Preservation Showcase

Accessible software frameworks for reproducible image analysis of host-pathogen interactions

Um die Mechanismen hinter lebensgefährlichen Krankheiten zu verstehen, müssen die zugrundeliegenden Interaktionen zwischen den Wirtszellen und krankheitserregenden Mikroorganismen bekannt sein. Die kontinuierlichen Verbesserungen in bildgebenden Verfahren und Computertechnologien ermöglichen die Anwendung von Methoden aus der bildbasierten Systembiologie, welche moderne Computeralgorithmen benutzt um das Verhalten von Zellen, Geweben oder ganzen Organen präzise zu messen. Um den Standards des digitalen Managements von Forschungsdaten zu genügen, müssen Algorithmen den FAIR-Prinzipien (Findability, Accessibility, Interoperability, and Reusability) entsprechen und zur Verbreitung ebenjener in der wissenschaftlichen Gemeinschaft beitragen. Dies ist insbesondere wichtig für interdisziplinäre Teams bestehend aus Experimentatoren und Informatikern, in denen Computerprogramme zur Verbesserung der Kommunikation und schnellerer Adaption von neuen Technologien beitragen können. In dieser Arbeit wurden daher Software-Frameworks entwickelt, welche dazu beitragen die FAIR-Prinzipien durch die Entwicklung von standardisierten, reproduzierbaren, hochperformanten, und leicht zugänglichen Softwarepaketen zur Quantifizierung von Interaktionen in biologischen System zu verbreiten. Zusammenfassend zeigt diese Arbeit wie Software-Frameworks zu der Charakterisierung von Interaktionen zwischen Wirtszellen und Pathogenen beitragen können, indem der Entwurf und die Anwendung von quantitativen und FAIR-kompatiblen Bildanalyseprogrammen vereinfacht werden. Diese Verbesserungen erleichtern zukünftige Kollaborationen mit Lebenswissenschaftlern und Medizinern, was nach dem Prinzip der bildbasierten Systembiologie zur Entwicklung von neuen Experimenten, Bildgebungsverfahren, Algorithmen, und Computermodellen führen wird

Planetary Science Informatics and Data Analytics Conference : April 24–26, 2018, St. Louis, Missouri

The PSIDA conference provides a forum to discuss approaches, challenges, and applications of informatics and data analytics technologies and capabilities in planetary science.Institutional Support NASA Planetary Data System Geosciences, Lunar and Planetary Institute.Chairs Tom Stein, Washington University, St. Louis, USA, Dan Crichton, Jet Propulsion Laboratory, Pasadena, USA ; Program Committee Alphan Altinok, Jet Propulsion Laboratory, Pasadena, USA … [and 8 others]PARTIAL CONTENTS: ESA Planetary Science Archive Architecture and Data Management--SPICE for ESA Planetary Missions--VESPA: Enlarging the Virtual Observatory to Planetary Science--SeaBIRD: A Flexible and Intuitive Planetary Datamining Infrastructure--Model-Driven Development for PDS4 Software and Services--The Need for a Planetary Spatial Data Clearinghouse--The Relationship Between Planetary Spatial Data Infrastructure and the Planetary Data System--Update on the NASA-USGS Planetary Spatial Data Infrastructure Inter-Agency Agreement--MoonDB - A Data System for Analytical Data of Lunar Samples--Large-Scale Numerical Simulations of Planetary Interiors--Scalable Data Processing with the LROC Processing Pipelines--PACKMAN-Net: A Distributed, Open-Access, and Scalable Network of User-Friendly Space Weather Stations

Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research

Mass spectrometry (MS) techniques, because of their sensitivity and selectivity, have become methods of choice to characterize the human metabolome and MS-based metabolomics is increasingly used to characterize the complex metabolic effects of nutrients or foods. However progress is still hampered by many unsolved problems and most notably the lack of well established and standardized methods or procedures, and the difficulties still met in the identification of the metabolites influenced by a given nutritional intervention. The purpose of this paper is to review the main obstacles limiting progress and to make recommendations to overcome them. Propositions are made to improve the mode of collection and preparation of biological samples, the coverage and quality of mass spectrometry analyses, the extraction and exploitation of the raw data, the identification of the metabolites and the biological interpretation of the results

Electronic Imaging & the Visual Arts. EVA 2013 Florence

Important Information Technology topics are presented: multimedia systems, data-bases, protection of data, access to the content. Particular reference is reserved to digital images (2D, 3D) regarding Cultural Institutions (Museums, Libraries, Palace – Monuments, Archaeological Sites). The main parts of the Conference Proceedings regard: Strategic Issues, EC Projects and Related Networks & Initiatives, International Forum on “Culture & Technology”, 2D – 3D Technologies & Applications, Virtual Galleries – Museums and Related Initiatives, Access to the Culture Information. Three Workshops are related to: International Cooperation, Innovation and Enterprise, Creative Industries and Cultural Tourism

The Third NASA Goddard Conference on Mass Storage Systems and Technologies

This report contains copies of nearly all of the technical papers and viewgraphs presented at the Goddard Conference on Mass Storage Systems and Technologies held in October 1993. The conference served as an informational exchange forum for topics primarily relating to the ingestion and management of massive amounts of data and the attendant problems involved. Discussion topics include the necessary use of computers in the solution of today's infinitely complex problems, the need for greatly increased storage densities in both optical and magnetic recording media, currently popular storage media and magnetic media storage risk factors, data archiving standards including a talk on the current status of the IEEE Storage Systems Reference Model (RM). Additional topics addressed System performance, data storage system concepts, communications technologies, data distribution systems, data compression, and error detection and correction