413 research outputs found
OntoAna: Domain Ontology for Human Anatomy
Today, we can find many search engines which provide us with information
which is more operational in nature. None of the search engines provide domain
specific information. This becomes very troublesome to a novice user who wishes
to have information in a particular domain. In this paper, we have developed an
ontology which can be used by a domain specific search engine. We have
developed an ontology on human anatomy, which captures information regarding
cardiovascular system, digestive system, skeleton and nervous system. This
information can be used by people working in medical and health care domain.Comment: Proceedings of 5th CSI National Conference on Education and Research.
Organized by Lingayay University, Faridabad. Sponsored by Computer Society of
India and IEEE Delhi Chapter. Proceedings published by Lingayay University
Pres
An expert system for safety instrumented system in petroleum industry
The expert system technology has been developed since 1960s and now it has proven to be a useful and effective tool in many areas. It helps shorten the time required to accomplish a certain job and relieve the workload for human staves by implement the task automatically.
This master thesis gives general introduction about the expert system and the technologies involved with it. We also discussed the framework of the expert system and how it will interact with the existing cause and effect matrix.
The thesis describes a way of implementing automatic textual verification and the possibility of automatic information extraction in the designing process of safety instrumented systems. We use the Protégé application [*] to make models for the Cause and Effect Matrix and use XMLUnit to implement the comparison between two files of interest
Semi-automated ontology generation within OBO-Edit
Motivation: Ontologies and taxonomies have proven highly beneficial for biocuration. The Open Biomedical Ontology (OBO) Foundry alone lists over 90 ontologies mainly built with OBO-Edit. Creating and maintaining such ontologies is a labour-intensive, difficult, manual process. Automating parts of it is of great importance for the further development of ontologies and for biocuration
Semi-automated Ontology Generation for Biocuration and Semantic Search
Background:
In the life sciences, the amount of literature and experimental data grows at a tremendous rate. In order to effectively access and integrate these data, biomedical ontologies – controlled, hierarchical vocabularies – are being developed.
Creating and maintaining such ontologies is a difficult, labour-intensive, manual process. Many computational methods which can support ontology construction have been proposed in the past. However, good, validated systems are largely missing.
Motivation:
The biocuration community plays a central role in the development of ontologies. Any method that can support their efforts has the potential to have a huge impact in the life sciences.
Recently, a number of semantic search engines were created that make use of biomedical ontologies for document retrieval. To transfer the technology to other knowledge domains, suitable ontologies need to be created. One area where ontologies may prove particularly useful is the search for alternative methods to animal testing, an area where comprehensive search is of special interest to determine the availability or unavailability of alternative methods.
Results:
The Dresden Ontology Generator for Directed Acyclic Graphs (DOG4DAG) developed in this thesis is a system which supports the creation and extension of ontologies by semi-automatically generating terms, definitions, and parent-child relations from text in PubMed, the web, and PDF repositories. The system is seamlessly integrated into OBO-Edit and Protégé, two widely used ontology editors in the life sciences. DOG4DAG generates terms by identifying statistically significant noun-phrases in text. For definitions and parent-child relations it employs pattern-based web searches. Each generation step has been systematically evaluated using manually validated benchmarks. The term generation leads to high quality terms also found in manually created ontologies. Definitions can be retrieved for up to 78% of terms, child ancestor relations for up to 54%. No other validated system exists that achieves comparable results.
To improve the search for information on alternative methods to animal testing an ontology has been developed that contains 17,151 terms of which 10% were newly created and 90% were re-used from existing resources. This ontology is the core of Go3R, the first semantic search engine in this field. When a user performs a search query with Go3R, the search engine expands this request using the structure and terminology of the ontology. The machine classification employed in Go3R is capable of distinguishing documents related to alternative methods from those which are not with an F-measure of 90% on a manual benchmark. Approximately 200,000 of the 19 million documents listed in PubMed were identified as relevant, either because a specific term was contained or due to the automatic classification. The Go3R search engine is available on-line under www.Go3R.org
Rivière or Fleuve? Modelling Multilinguality in the Hydrographical
The need for interoperability among geospatial resources in different natural languages evidences the difficulties to cope with domain representations highly dependent of the culture in which they have been conceived. In this paper we characterize the problem of representing cultural discrepancies in ontologies. We argue that such differences can be accounted for at the ontology terminological layer by means of external elaborated models of linguistic information associated to ontologies. With the aim of showing how external models can cater for cultural discrepancies, we compare two versions of an ontology of the hydrographical domain: hydrOntology. The first version makes use of the labeling system supported by RDF(S) and OWL to include multilingual linguistic information in the ontology. The second version relies on the Linguistic Information Repository model (LIR) to associate structured multilingual information to ontology concepts. In this paper we propose an extension to the LIR to better capture linguistic and cultural specificities within and across language
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