45,427 research outputs found
S-COL: A Copernican turn for the development of flexibly reusable collaboration scripts
Collaboration scripts are usually implemented as parts of a particular collaborative-learning platform. Therefore, scripts of demonstrated effectiveness are hardly used with learning platforms at other sites, and replication studies are rare. The approach of a platform-independent description language for scripts that allows for easy implementation of the same script on different platforms has not succeeded yet in making the transfer of scripts feasible. We present an alternative solution that treats the problem as a special case of providing support on top of diverse Web pages: In this case, the challenge is to trigger support based on the recognition of a Web page as belonging to a specific type of functionally equivalent pages such as the search query form or the results page of a search engine. The solution suggested has been implemented by means of a tool called S-COL (Scripting for Collaborative Online Learning) and allows for the sustainable development of scripts and scaffolds that can be used with a broad variety of content and platforms. The tool’s functions are described. In order to demonstrate the feasibility and ease of script reuse with S-COL, we describe the flexible re-implementation of a collaboration script for argumentation in S-COL and its adaptation to different learning platforms. To demonstrate that a collaboration script implemented in S-COL can actually foster learning, an empirical study about the effects of a specific script for collaborative online search on learning activities is presented. The further potentials and the limitations of the S-COL approach are discussed
Grid service orchestration using the Business Process Execution Language (BPEL)
Modern scientific applications often need to be distributed across grids. Increasingly
applications rely on services, such as job submission, data transfer or data
portal services. We refer to such services as grid services. While the invocation
of grid services could be hard coded in theory, scientific users want to orchestrate
service invocations more flexibly. In enterprise applications, the orchestration of
web services is achieved using emerging orchestration standards, most notably
the Business Process Execution Language (BPEL). We describe our experience
in orchestrating scientific workflows using BPEL. We have gained this experience
during an extensive case study that orchestrates grid services for the automation of
a polymorph prediction application
WebDocBall : a graphical visualisation tool for web search results
In the Web search process people often think that the hardest work is done by the search engines or by the directories which are entrusted with finding the Web pages. While this is partially true, a not less important part of the work is done by the user, who has to decide which page is relevant from the huge set of retrieved pages. In this paper we present a graphical visualisation tool aimed at helping users to determine the relevance of a Web page with respect to its structure. Such tool can help the user in the often tedious task of deciding which page is relevant enough to deserve a visit
ProThes: Thesaurus-based Meta-Search Engine for a Specific Application Domain
In this poster we introduce ProThes, a pilot meta-search engine (MSE) for a specific application domain. ProThes combines three approaches: meta-search, graphical user interface (GUI) for query specification, and thesaurus-based query techniques. ProThes attempts to employ domain-specific knowledge, which is represented by both a conceptual thesaurus and results ranking heuristics. Since the knowledge representation is separated from the MSE core, adjusting the system to a specific domain is trouble free. Thesaurus allows for manual query building and automatic query techniques. This poster outlines the overall system architecture, thesaurus representation format, and query operations. ProThes is implemented on J2EE platform as a Web service.The project was supported in part by the Russian Fund of Basic Research, grant # 03-07-90342
Multi Visualization and Dynamic Query for Effective Exploration of Semantic Data
Semantic formalisms represent content in a uniform way according to ontologies. This enables manipulation and reasoning via automated means (e.g. Semantic Web services), but limits the user’s ability to explore the semantic data from a point of view that originates from knowledge representation motivations. We show how, for user consumption, a visualization of semantic data according to some easily graspable dimensions (e.g. space and time) provides effective sense-making of data. In this paper, we look holistically at the interaction between users and semantic data, and propose multiple visualization strategies and dynamic filters to support the exploration of semantic-rich data.
We discuss a user evaluation and how interaction challenges could be overcome to create an effective user-centred framework for the visualization and manipulation of semantic data. The approach has been implemented and evaluated on a real company archive
BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models
Background: Quantitative models of biochemical and cellular systems are used to answer a variety of questions in the
biological sciences. The number of published quantitative models is growing steadily thanks to increasing interest in
the use of models as well as the development of improved software systems and the availability of better, cheaper
computer hardware. To maximise the benefits of this growing body of models, the field needs centralised model
repositories that will encourage, facilitate and promote model dissemination and reuse. Ideally, the models stored in
these repositories should be extensively tested and encoded in community-supported and standardised formats. In
addition, the models and their components should be cross-referenced with other resources in order to allow their
unambiguous identification.
Description: BioModels Database http://www.ebi.ac.uk/biomodels/ is aimed at addressing exactly these needs. It is a
freely-accessible online resource for storing, viewing, retrieving, and analysing published, peer-reviewed quantitative
models of biochemical and cellular systems. The structure and behaviour of each simulation model distributed by
BioModels Database are thoroughly checked; in addition, model elements are annotated with terms from controlled
vocabularies as well as linked to relevant data resources. Models can be examined online or downloaded in various
formats. Reaction network diagrams generated from the models are also available in several formats. BioModels
Database also provides features such as online simulation and the extraction of components from large scale models
into smaller submodels. Finally, the system provides a range of web services that external software systems can use to
access up-to-date data from the database.
Conclusions: BioModels Database has become a recognised reference resource for systems biology. It is being used by
the community in a variety of ways; for example, it is used to benchmark different simulation systems, and to study the
clustering of models based upon their annotations. Model deposition to the database today is advised by several
publishers of scientific journals. The models in BioModels Database are freely distributed and reusable; the underlying
software infrastructure is also available from SourceForge https://sourceforge.net/projects/biomodels/ under the GNU
General Public License
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