A Survey on Deep Learning in Medical Image Analysis

Deep learning algorithms, in particular convolutional networks, have rapidly become a methodology of choice for analyzing medical images. This paper reviews the major deep learning concepts pertinent to medical image analysis and summarizes over 300 contributions to the field, most of which appeared in the last year. We survey the use of deep learning for image classification, object detection, segmentation, registration, and other tasks and provide concise overviews of studies per application area. Open challenges and directions for future research are discussed.Comment: Revised survey includes expanded discussion section and reworked introductory section on common deep architectures. Added missed papers from before Feb 1st 201

Enhanced Face Recognition Method Performance on Android vs Windows Platform

Android is becoming one of the most popular operating systems on smartphones, tablet computers and similar mobile devices. With the quick development in mobile device specifications, it is worthy to think about mobile devices as current or - at least - near future replacement of personal computers. This paper presents an enhanced face recognition method. The method is tested on two different platforms using Windows and Android operating systems. This is done to evaluate the method and to compare the platforms. The platforms are compared according to two factors: development simplicity and performance. The target is evaluating the possibility of replacing personal computers using Windows operating system by mobile devices using Android operating system. Face recognition has been chosen because of the relatively high computing cost of image processing and pattern recognition applications comparing with other applications. The experiment results show acceptable performance of the method on Android platform

Extracting Agricultural Fields from Remote Sensing Imagery Using Graph-Based Growing Contours

Knowledge of the location and extent of agricultural fields is required for many applications, including agricultural statistics, environmental monitoring, and administrative policies. Furthermore, many mapping applications, such as object-based classification, crop type distinction, or large-scale yield prediction benefit significantly from the accurate delineation of fields. Still, most existing field maps and observation systems rely on historic administrative maps or labor-intensive field campaigns. These are often expensive to maintain and quickly become outdated, especially in regions of frequently changing agricultural patterns. However, exploiting openly available remote sensing imagery (e.g., from the European Union’s Copernicus programme) may allow for frequent and efficient field mapping with minimal human interaction. We present a new approach to extracting agricultural fields at the sub-pixel level. It consists of boundary detection and a field polygon extraction step based on a newly developed, modified version of the growing snakes active contours model we refer to as graph-based growing contours. This technique is capable of extracting complex networks of boundaries present in agricultural landscapes, and is largely automatic with little supervision required. The whole detection and extraction process is designed to work independently of sensor type, resolution, or wavelength. As a test case, we applied the method to two regions of interest in a study area in the northern Germany using multi-temporal Sentinel-2 imagery. Extracted fields were compared visually and quantitatively to ground reference data. The technique proved reliable in producing polygons closely matching reference data, both in terms of boundary location and statistical proxies such as median field size and total acreage

Statistical and image processing techniques for remote sensing in agricultural monitoring and mapping

Throughout most of history, increasing agricultural production has been largely driven by expanded land use, and – especially in the 19th and 20th century – by technological innovation in breeding, genetics and agrochemistry as well as intensification through mechanization and industrialization. More recently, information technology, digitalization and automation have started to play a more significant role in achieving higher productivity with lower environmental impact and reduced use of resources. This includes two trends on opposite scales: precision farming applying detailed observations on sub-field level to support local management, and large-scale agricultural monitoring observing regional patterns in plant health and crop productivity to help manage macroeconomic and environmental trends. In both contexts, remote sensing imagery plays a crucial role that is growing due to decreasing costs and increasing accessibility of both data and means of processing and analysis. The large archives of free imagery with global coverage, can be expected to further increase adoption of remote sensing techniques in coming years. This thesis addresses multiple aspects of remote sensing in agriculture by presenting new techniques in three distinct research topics: (1) remote sensing data assimilation in dynamic crop models; (2) agricultural field boundary detection from remote sensing observations; and (3) contour extraction and field polygon creation from remote sensing imagery. These key objectives are achieved through combining methods of probability analysis, uncertainty quantification, evolutionary learning and swarm intelligence, graph theory, image processing, deep learning and feature extraction. Four new techniques have been developed. Firstly, a new data assimilation technique based on statistical distance metrics and probability distribution analysis to achieve a flexible representation of model- and measurement-related uncertainties. Secondly, a method for detecting boundaries of agricultural fields based on remote sensing observations designed to only rely on image-based information in multi-temporal imagery. Thirdly, an improved boundary detection approach based on deep learning techniques and a variety of image features. Fourthly, a new active contours method called Graph-based Growing Contours (GGC) that allows automatized extractionof complex boundary networks from imagery. The new approaches are tested and evaluated on multiple study areas in the states of Schleswig-Holstein, Niedersachsen and Sachsen-Anhalt, Germany, based on combine harvester measurements, cadastral data and manual mappings. All methods were designed with flexibility and applicability in mind. They proved to perform similarly or better than other existing methods and showed potential for large-scale application and their synergetic use. Thanks to low data requirements and flexible use of inputs, their application is neither constrained to the specific applications presented here nor the use of a specific type of sensor or imagery. This flexibility, in theory, enables their use even outside of the field of remote sensing.Landwirtschaftliche Produktivitätssteigerung wurde historisch hauptsächlich durch Erschließung neuer Anbauflächen und später, insbesondere im 19. und 20. Jahrhundert, durch technologische Innovation in Züchtung, Genetik und Agrarchemie sowie Intensivierung in Form von Mechanisierung und Industrialisierung erreicht. In jüngerer Vergangenheit spielen jedoch Informationstechnologie, Digitalisierung und Automatisierung zunehmend eine größere Rolle, um die Produktivität bei reduziertem Umwelteinfluss und Ressourcennutzung weiter zu steigern. Daraus folgen zwei entgegengesetzte Trends: Zum einen Precision Farming, das mithilfe von Detailbeobachtungen die lokale Feldarbeit unterstützt, und zum anderen großskalige landwirtschaftliche Beobachtung von Bestands- und Ertragsmustern zur Analyse makroökonomischer und ökologischer Trends. In beiden Fällen spielen Fernerkundungsdaten eine entscheidende Rolle und gewinnen dank sinkender Kosten und zunehmender Verfügbarkeit, sowohl der Daten als auch der Möglichkeiten zu ihrer Verarbeitung und Analyse, weiter an Bedeutung. Die Verfügbarkeit großer, freier Archive von globaler Abdeckung werden in den kommenden Jahren voraussichtlich zu einer zunehmenden Verwendung führen. Diese Dissertation behandelt mehrere Aspekte der Fernerkundungsanwendung in der Landwirtschaft und präsentiert neue Methoden zu drei Themenbereichen: (1) Assimilation von Fernerkundungsdaten in dynamischen Agrarmodellen; (2) Erkennung von landwirtschaftlichen Feldgrenzen auf Basis von Fernerkundungsbeobachtungen; und (3) Konturextraktion und Erstellung von Polygonen aus Fernerkundungsaufnahmen. Zur Bearbeitung dieser Zielsetzungen werden verschiedene Techniken aus der Wahrscheinlichkeitsanalyse, Unsicherheitsquantifizierung, dem evolutionären Lernen und der Schwarmintelligenz, der Graphentheorie, dem Bereich der Bildverarbeitung, Deep Learning und Feature-Extraktion kombiniert. Es werden vier neue Methoden vorgestellt. Erstens, eine neue Methode zur Datenassimilation basierend auf statistischen Distanzmaßen und Wahrscheinlichkeitsverteilungen zur flexiblen Abbildung von Modell- und Messungenauigkeiten. Zweitens, eine neue Technik zur Erkennung von Feldgrenzen, ausschließlich auf Basis von Bildinformationen aus multi-temporalen Fernerkundungsdaten. Drittens, eine verbesserte Feldgrenzenerkennung basierend auf Deep Learning Methoden und verschiedener Bildmerkmale. Viertens, eine neue Aktive Kontur Methode namens Graph-based Growing Contours (GGC), die es erlaubt, komplexe Netzwerke von Konturen aus Bildern zu extrahieren. Alle neuen Ansätze werden getestet und evaluiert anhand von Mähdreschermessungen, Katasterdaten und manuellen Kartierungen in verschiedenen Testregionen in den Bundesländern Schleswig-Holstein, Niedersachsen und Sachsen-Anhalt. Alle vorgestellten Methoden sind auf Flexibilität und Anwendbarkeit ausgelegt. Im Vergleich zu anderen Methoden zeigten sie vergleichbare oder bessere Ergebnisse und verdeutlichten das Potenzial zur großskaligen Anwendung sowie kombinierter Verwendung. Dank der geringen Anforderungen und der flexiblen Verwendung verschiedener Eingangsdaten ist die Nutzung nicht nur auf die hier beschriebenen Anwendungen oder bestimmte Sensoren und Bilddaten beschränkt. Diese Flexibilität erlaubt theoretisch eine breite Anwendung, auch außerhalb der Fernerkundung

AI-enabled modeling and monitoring of data-rich advanced manufacturing systems

The infrastructure of cyber-physical systems (CPS) is based on a meta-concept of cybermanufacturing systems (CMS) that synchronizes the Industrial Internet of Things (IIoTs), Cloud Computing, Industrial Control Systems (ICSs), and Big Data analytics in manufacturing operations. Artificial Intelligence (AI) can be incorporated to make intelligent decisions in the day-to-day operations of CMS. Cyberattack spaces in AI-based cybermanufacturing operations pose significant challenges, including unauthorized modification of systems, loss of historical data, destructive malware, software malfunctioning, etc. However, a cybersecurity framework can be implemented to prevent unauthorized access, theft, damage, or other harmful attacks on electronic equipment, networks, and sensitive data. The five main cybersecurity framework steps are divided into procedures and countermeasure efforts, including identifying, protecting, detecting, responding, and recovering. Given the major challenges in AI-enabled cybermanufacturing systems, three research objectives are proposed in this dissertation by incorporating cybersecurity frameworks. The first research aims to detect the in-situ additive manufacturing (AM) process authentication problem using high-volume video streaming data. A side-channel monitoring approach based on an in-situ optical imaging system is established, and a tensor-based layer-wise texture descriptor is constructed to describe the observed printing path. Subsequently, multilinear principal component analysis (MPCA) is leveraged to reduce the dimension of the tensor-based texture descriptor, and low-dimensional features can be extracted for detecting attack-induced alterations. The second research work seeks to address the high-volume data stream problems in multi-channel sensor fusion for diverse bearing fault diagnosis. This second approach proposes a new multi-channel sensor fusion method by integrating acoustics and vibration signals with different sampling rates and limited training data. The frequency-domain tensor is decomposed by MPCA, resulting in low-dimensional process features for diverse bearing fault diagnosis by incorporating a Neural Network classifier. By linking the second proposed method, the third research endeavor is aligned to recovery systems of multi-channel sensing signals when a substantial amount of missing data exists due to sensor malfunction or transmission issues. This study has leveraged a fully Bayesian CANDECOMP/PARAFAC (FBCP) factorization method that enables to capture of multi-linear interaction (channels × signals) among latent factors of sensor signals and imputes missing entries based on observed signals

Soil Characterization Using Textural Features Extracted from GPR Data

Soils can be non-intrusively mapped by observing similar patterns within ground-penetrating radar (GPR) profiles. We observed that the intricate and often indiscernible textural variability found within a complex GPR image possesses important parameters that help delineate regions of similar soil characteristics. Therefore, in this study, we examined the feasibility of using textural features extracted from GPR data to automate soil characterizations. The textural features were matched to a fingerprint database of previous soil classifications of GPR textural features and the corresponding ground truths of soil conditions. Four textural features (energy, contrast, entropy, and homogeneity) were selected for inputs into a neural-network classifier. This classifier was tested and verified using GPR data obtained from two distinctly different field sites. The first data set contained features that indicate the presence or lack of sandstone bedrock in the upper 2 m of a shallow soil profile of fine sandy loan and loam. The second data set contained columnar patterns that correspond to the presence or the lack of vertical preferential-flow paths within a deep loess soil. The classifier automatically grouped each of these data sets into one of the two categories. Comparing the results of classification using extracted textural features to the results obtained by visual interpretation found 93.6% of the sections that lack sandstone bedrock correctly classified in the first set of data, and 90% of the sections that contain pronounced columnar patterns correctly classified in the second set of data. The classified profile sections were mapped using integrated GPR and GPS data to show surface boundaries of different soil categories. These results indicate that extracted textural features can be utilized for automatic characterization of soils using GPR data