311 research outputs found

    Incremental schema integration for data wrangling via knowledge graphs

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    Virtual data integration is the current approach to go for data wrangling in data-driven decision-making. In this paper, we focus on automating schema integration, which extracts a homogenised representation of the data source schemata and integrates them into a global schema to enable virtual data integration. Schema integration requires a set of well-known constructs: the data source schemata and wrappers, a global integrated schema and the mappings between them. Based on them, virtual data integration systems enable fast and on-demand data exploration via query rewriting. Unfortunately, the generation of such constructs is currently performed in a largely manual manner, hindering its feasibility in real scenarios. This becomes aggravated when dealing with heterogeneous and evolving data sources. To overcome these issues, we propose a fully-fledged semi-automatic and incremental approach grounded on knowledge graphs to generate the required schema integration constructs in four main steps: bootstrapping, schema matching, schema integration, and generation of system-specific constructs. We also present NextiaDI, a tool implementing our approach. Finally, a comprehensive evaluation is presented to scrutinize our approach.This work was partly supported by the DOGO4ML project, funded by the Spanish Ministerio de Ciencia e Innovación under project PID2020-117191RB-I00, and D3M project, funded by the Spanish Agencia Estatal de Investigación (AEI) under project PDC2021-121195-I00. Javier Flores is supported by contract 2020-DI-027 of the Industrial Doctorate Program of the Government of Catalonia and Consejo Nacional de Ciencia y Tecnología (CONACYT, Mexico). Sergi Nadal is partly supported by the Spanish Ministerio de Ciencia e Innovación, as well as the European Union – NextGenerationEU, under project FJC2020-045809-I.Peer ReviewedPostprint (published version

    Measuring the impact of COVID-19 on hospital care pathways

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    Care pathways in hospitals around the world reported significant disruption during the recent COVID-19 pandemic but measuring the actual impact is more problematic. Process mining can be useful for hospital management to measure the conformance of real-life care to what might be considered normal operations. In this study, we aim to demonstrate that process mining can be used to investigate process changes associated with complex disruptive events. We studied perturbations to accident and emergency (A &E) and maternity pathways in a UK public hospital during the COVID-19 pandemic. Co-incidentally the hospital had implemented a Command Centre approach for patient-flow management affording an opportunity to study both the planned improvement and the disruption due to the pandemic. Our study proposes and demonstrates a method for measuring and investigating the impact of such planned and unplanned disruptions affecting hospital care pathways. We found that during the pandemic, both A &E and maternity pathways had measurable reductions in the mean length of stay and a measurable drop in the percentage of pathways conforming to normative models. There were no distinctive patterns of monthly mean values of length of stay nor conformance throughout the phases of the installation of the hospital’s new Command Centre approach. Due to a deficit in the available A &E data, the findings for A &E pathways could not be interpreted

    Semantic Data Management in Data Lakes

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    In recent years, data lakes emerged as away to manage large amounts of heterogeneous data for modern data analytics. One way to prevent data lakes from turning into inoperable data swamps is semantic data management. Some approaches propose the linkage of metadata to knowledge graphs based on the Linked Data principles to provide more meaning and semantics to the data in the lake. Such a semantic layer may be utilized not only for data management but also to tackle the problem of data integration from heterogeneous sources, in order to make data access more expressive and interoperable. In this survey, we review recent approaches with a specific focus on the application within data lake systems and scalability to Big Data. We classify the approaches into (i) basic semantic data management, (ii) semantic modeling approaches for enriching metadata in data lakes, and (iii) methods for ontologybased data access. In each category, we cover the main techniques and their background, and compare latest research. Finally, we point out challenges for future work in this research area, which needs a closer integration of Big Data and Semantic Web technologies

    Supporting requirement elicitation and ontology testing in knowledge graph engineering

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    Knowledge graphs and ontologies are closely related concepts in the field of knowledge representation. In recent years, knowledge graphs have gained increasing popularity and are serving as essential components in many knowledge engineering projects that view them as crucial to their success. The conceptual foundation of the knowledge graph is provided by ontologies. Ontology modeling is an iterative engineering process that consists of steps such as the elicitation and formalization of requirements, the development, testing, refactoring, and release of the ontology. The testing of the ontology is a crucial and occasionally overlooked step of the process due to the lack of integrated tools to support it. As a result of this gap in the state-of-the-art, the testing of the ontology is completed manually, which requires a considerable amount of time and effort from the ontology engineers. The lack of tool support is noticed in the requirement elicitation process as well. In this aspect, the rise in the adoption and accessibility of knowledge graphs allows for the development and use of automated tools to assist with the elicitation of requirements from such a complementary source of data. Therefore, this doctoral research is focused on developing methods and tools that support the requirement elicitation and testing steps of an ontology engineering process. To support the testing of the ontology, we have developed XDTesting, a web application that is integrated with the GitHub platform that serves as an ontology testing manager. Concurrently, to support the elicitation and documentation of competency questions, we have defined and implemented RevOnt, a method to extract competency questions from knowledge graphs. Both methods are evaluated through their implementation and the results are promising

    Research Paper: Process Mining and Synthetic Health Data: Reflections and Lessons Learnt

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    Analysing the treatment pathways in real-world health data can provide valuable insight for clinicians and decision-makers. However, the procedures for acquiring real-world data for research can be restrictive, time-consuming and risks disclosing identifiable information. Synthetic data might enable representative analysis without direct access to sensitive data. In the first part of our paper, we propose an approach for grading synthetic data for process analysis based on its fidelity to relationships found in real-world data. In the second part, we apply our grading approach by assessing cancer patient pathways in a synthetic healthcare dataset (The Simulacrum provided by the English National Cancer Registration and Analysis Service) using process mining. Visualisations of the patient pathways within the synthetic data appear plausible, showing relationships between events confirmed in the underlying non-synthetic data. Data quality issues are also present within the synthetic data which reflect real-world problems and artefacts from the synthetic dataset’s creation. Process mining of synthetic data in healthcare is an emerging field with novel challenges. We conclude that researchers should be aware of the risks when extrapolating results produced from research on synthetic data to real-world scenarios and assess findings with analysts who are able to view the underlying data

    Connecting works of art within the semantic web of symbolic meanings

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    My doctoral research is about the modelling of symbolism in the cultural heritage domain, and on connecting artworks based on their symbolism through knowledge extraction and representation techniques. In particular, I participated in the design of two ontologies: one models the relationships between a symbol, its symbolic meaning, and the cultural context in which the symbol symbolizes the symbolic meaning; the second models artistic interpretations of a cultural heritage object from an iconographic and iconological (thus also symbolic) perspective. I also converted several sources of unstructured data, a dictionary of symbols and an encyclopaedia of symbolism, and semi-structured data, DBpedia and WordNet, to create HyperReal, the first knowledge graph dedicated to conventional cultural symbolism. By making use of HyperReal's content, I showed how linked open data about cultural symbolism could be utilized to initiate a series of quantitative studies that analyse (i) similarities between cultural contexts based on their symbologies, (ii) broad symbolic associations, (iii) specific case studies of symbolism such as the relationship between symbols, their colours, and their symbolic meanings. Moreover, I developed a system that can infer symbolic, cultural context-dependent interpretations from artworks according to what they depict, envisioning potential use cases for museum curation. I have then re-engineered the iconographic and iconological statements of Wikidata, a widely used general-domain knowledge base, creating ICONdata: an iconographic and iconological knowledge graph. ICONdata was then enriched with automatic symbolic interpretations. Subsequently, I demonstrated the significance of enhancing artwork information through alignment with linked open data related to symbolism, resulting in the discovery of novel connections between artworks. Finally, I contributed to the creation of a software application. This application leverages established connections, allowing users to investigate the symbolic expression of a concept across different cultural contexts through the generation of a three-dimensional exhibition of artefacts symbolising the chosen concept

    Knowledge Augmented Machine Learning with Applications in Autonomous Driving: A Survey

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    The existence of representative datasets is a prerequisite of many successful artificial intelligence and machine learning models. However, the subsequent application of these models often involves scenarios that are inadequately represented in the data used for training. The reasons for this are manifold and range from time and cost constraints to ethical considerations. As a consequence, the reliable use of these models, especially in safety-critical applications, is a huge challenge. Leveraging additional, already existing sources of knowledge is key to overcome the limitations of purely data-driven approaches, and eventually to increase the generalization capability of these models. Furthermore, predictions that conform with knowledge are crucial for making trustworthy and safe decisions even in underrepresented scenarios. This work provides an overview of existing techniques and methods in the literature that combine data-based models with existing knowledge. The identified approaches are structured according to the categories integration, extraction and conformity. Special attention is given to applications in the field of autonomous driving
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