Binary Jumbled String Matching for Highly Run-Length Compressible Texts

The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s. Previous solutions created an index of size O(n) in a pre-processing step, which was then used to answer queries in constant time. The fastest algorithms for construction of this index have running time $O(n^2/\log n)$ [Burcsi et al., FUN 2010; Moosa and Rahman, IPL 2010], or $O(n^2/\log^2 n)$ in the word-RAM model [Moosa and Rahman, JDA 2012]. We propose an index constructed directly from the run-length encoding of $s$. The construction time of our index is $O(n+\rho^2\log \rho)$, where O(n) is the time for computing the run-length encoding of $s$ and $\rho$ is the length of this encoding---this is no worse than previous solutions if $\rho = O(n/\log n)$ and better if $\rho = o(n/\log n)$. Our index $L$ can be queried in $O(\log \rho)$ time. While $|L|= O(\min(n, \rho^{2}))$ in the worst case, preliminary investigations have indicated that $|L|$ may often be close to $\rho$. Furthermore, the algorithm for constructing the index is conceptually simple and easy to implement. In an attempt to shed light on the structure and size of our index, we characterize it in terms of the prefix normal forms of $s$ introduced in [Fici and Lipt\'ak, DLT 2011].Comment: v2: only small cosmetic changes; v3: new title, weakened conjectures on size of Corner Index (we no longer conjecture it to be always linear in size of RLE); removed experimental part on random strings (these are valid but limited in their predictive power w.r.t. general strings); v3 published in IP

Conditional Lower Bounds for Space/Time Tradeoffs

In recent years much effort has been concentrated towards achieving polynomial time lower bounds on algorithms for solving various well-known problems. A useful technique for showing such lower bounds is to prove them conditionally based on well-studied hardness assumptions such as 3SUM, APSP, SETH, etc. This line of research helps to obtain a better understanding of the complexity inside P. A related question asks to prove conditional space lower bounds on data structures that are constructed to solve certain algorithmic tasks after an initial preprocessing stage. This question received little attention in previous research even though it has potential strong impact. In this paper we address this question and show that surprisingly many of the well-studied hard problems that are known to have conditional polynomial time lower bounds are also hard when concerning space. This hardness is shown as a tradeoff between the space consumed by the data structure and the time needed to answer queries. The tradeoff may be either smooth or admit one or more singularity points. We reveal interesting connections between different space hardness conjectures and present matching upper bounds. We also apply these hardness conjectures to both static and dynamic problems and prove their conditional space hardness. We believe that this novel framework of polynomial space conjectures can play an important role in expressing polynomial space lower bounds of many important algorithmic problems. Moreover, it seems that it can also help in achieving a better understanding of the hardness of their corresponding problems in terms of time

Clustered Integer 3SUM via Additive Combinatorics

We present a collection of new results on problems related to 3SUM, including: 1. The first truly subquadratic algorithm for $\ \ \ \ \$ 1a. computing the (min,+) convolution for monotone increasing sequences with integer values bounded by $O(n)$, $\ \ \ \ \$1b. solving 3SUM for monotone sets in 2D with integer coordinates bounded by $O(n)$, and $\ \ \ \ \$1c. preprocessing a binary string for histogram indexing (also called jumbled indexing). The running time is: $O(n^{(9+\sqrt{177})/12}\,\textrm{polylog}\,n)=O(n^{1.859})$ with randomization, or $O(n^{1.864})$ deterministically. This greatly improves the previous $n^2/2^{\Omega(\sqrt{\log n})}$ time bound obtained from Williams' recent result on all-pairs shortest paths [STOC'14], and answers an open question raised by several researchers studying the histogram indexing problem. 2. The first algorithm for histogram indexing for any constant alphabet size that achieves truly subquadratic preprocessing time and truly sublinear query time. 3. A truly subquadratic algorithm for integer 3SUM in the case when the given set can be partitioned into $n^{1-\delta}$ clusters each covered by an interval of length $n$, for any constant $\delta>0$. 4. An algorithm to preprocess any set of $n$ integers so that subsequently 3SUM on any given subset can be solved in $O(n^{13/7}\,\textrm{polylog}\,n)$ time. All these results are obtained by a surprising new technique, based on the Balog--Szemer\'edi--Gowers Theorem from additive combinatorics

On the Parikh-de-Bruijn grid

We introduce the Parikh-de-Bruijn grid, a graph whose vertices are fixed-order Parikh vectors, and whose edges are given by a simple shift operation. This graph gives structural insight into the nature of sets of Parikh vectors as well as that of the Parikh set of a given string. We show its utility by proving some results on Parikh-de-Bruijn strings, the abelian analog of de-Bruijn sequences.Comment: 18 pages, 3 figures, 1 tabl

Normal, Abby Normal, Prefix Normal

A prefix normal word is a binary word with the property that no substring has more 1s than the prefix of the same length. This class of words is important in the context of binary jumbled pattern matching. In this paper we present results about the number $pnw(n)$ of prefix normal words of length $n$, showing that $pnw(n) =\Omega\left(2^{n - c\sqrt{n\ln n}}\right)$ for some $c$ and $pnw(n) = O \left(\frac{2^n (\ln n)^2}{n}\right)$. We introduce efficient algorithms for testing the prefix normal property and a "mechanical algorithm" for computing prefix normal forms. We also include games which can be played with prefix normal words. In these games Alice wishes to stay normal but Bob wants to drive her "abnormal" -- we discuss which parameter settings allow Alice to succeed.Comment: Accepted at FUN '1