A Taxonomy of Data Grids for Distributed Data Sharing, Management and Processing

Data Grids have been adopted as the platform for scientific communities that need to share, access, transport, process and manage large data collections distributed worldwide. They combine high-end computing technologies with high-performance networking and wide-area storage management techniques. In this paper, we discuss the key concepts behind Data Grids and compare them with other data sharing and distribution paradigms such as content delivery networks, peer-to-peer networks and distributed databases. We then provide comprehensive taxonomies that cover various aspects of architecture, data transportation, data replication and resource allocation and scheduling. Finally, we map the proposed taxonomy to various Data Grid systems not only to validate the taxonomy but also to identify areas for future exploration. Through this taxonomy, we aim to categorise existing systems to better understand their goals and their methodology. This would help evaluate their applicability for solving similar problems. This taxonomy also provides a "gap analysis" of this area through which researchers can potentially identify new issues for investigation. Finally, we hope that the proposed taxonomy and mapping also helps to provide an easy way for new practitioners to understand this complex area of research.Comment: 46 pages, 16 figures, Technical Repor

Design and Implementation of a Distributed Middleware for Parallel Execution of Legacy Enterprise Applications

A typical enterprise uses a local area network of computers to perform its business. During the off-working hours, the computational capacities of these networked computers are underused or unused. In order to utilize this computational capacity an application has to be recoded to exploit concurrency inherent in a computation which is clearly not possible for legacy applications without any source code. This thesis presents the design an implementation of a distributed middleware which can automatically execute a legacy application on multiple networked computers by parallelizing it. This middleware runs multiple copies of the binary executable code in parallel on different hosts in the network. It wraps up the binary executable code of the legacy application in order to capture the kernel level data access system calls and perform them distributively over multiple computers in a safe and conflict free manner. The middleware also incorporates a dynamic scheduling technique to execute the target application in minimum time by scavenging the available CPU cycles of the hosts in the network. This dynamic scheduling also supports the CPU availability of the hosts to change over time and properly reschedule the replicas performing the computation to minimize the execution time. A prototype implementation of this middleware has been developed as a proof of concept of the design. This implementation has been evaluated with a few typical case studies and the test results confirm that the middleware works as expected

Lustre, Hadoop, Accumulo

Data processing systems impose multiple views on data as it is processed by the system. These views include spreadsheets, databases, matrices, and graphs. There are a wide variety of technologies that can be used to store and process data through these different steps. The Lustre parallel file system, the Hadoop distributed file system, and the Accumulo database are all designed to address the largest and the most challenging data storage problems. There have been many ad-hoc comparisons of these technologies. This paper describes the foundational principles of each technology, provides simple models for assessing their capabilities, and compares the various technologies on a hypothetical common cluster. These comparisons indicate that Lustre provides 2x more storage capacity, is less likely to loose data during 3 simultaneous drive failures, and provides higher bandwidth on general purpose workloads. Hadoop can provide 4x greater read bandwidth on special purpose workloads. Accumulo provides 10,000x lower latency on random lookups than either Lustre or Hadoop but Accumulo's bulk bandwidth is 10x less. Significant recent work has been done to enable mix-and-match solutions that allow Lustre, Hadoop, and Accumulo to be combined in different ways.Comment: 6 pages; accepted to IEEE High Performance Extreme Computing conference, Waltham, MA, 201

TOFEC: Achieving Optimal Throughput-Delay Trade-off of Cloud Storage Using Erasure Codes

Our paper presents solutions using erasure coding, parallel connections to storage cloud and limited chunking (i.e., dividing the object into a few smaller segments) together to significantly improve the delay performance of uploading and downloading data in and out of cloud storage. TOFEC is a strategy that helps front-end proxy adapt to level of workload by treating scalable cloud storage (e.g. Amazon S3) as a shared resource requiring admission control. Under light workloads, TOFEC creates more smaller chunks and uses more parallel connections per file, minimizing service delay. Under heavy workloads, TOFEC automatically reduces the level of chunking (fewer chunks with increased size) and uses fewer parallel connections to reduce overhead, resulting in higher throughput and preventing queueing delay. Our trace-driven simulation results show that TOFEC's adaptation mechanism converges to an appropriate code that provides the optimal delay-throughput trade-off without reducing system capacity. Compared to a non-adaptive strategy optimized for throughput, TOFEC delivers 2.5x lower latency under light workloads; compared to a non-adaptive strategy optimized for latency, TOFEC can scale to support over 3x as many requests

Efficient HTTP based I/O on very large datasets for high performance computing with the libdavix library

Remote data access for data analysis in high performance computing is commonly done with specialized data access protocols and storage systems. These protocols are highly optimized for high throughput on very large datasets, multi-streams, high availability, low latency and efficient parallel I/O. The purpose of this paper is to describe how we have adapted a generic protocol, the Hyper Text Transport Protocol (HTTP) to make it a competitive alternative for high performance I/O and data analysis applications in a global computing grid: the Worldwide LHC Computing Grid. In this work, we first analyze the design differences between the HTTP protocol and the most common high performance I/O protocols, pointing out the main performance weaknesses of HTTP. Then, we describe in detail how we solved these issues. Our solutions have been implemented in a toolkit called davix, available through several recent Linux distributions. Finally, we describe the results of our benchmarks where we compare the performance of davix against a HPC specific protocol for a data analysis use case.Comment: Presented at: Very large Data Bases (VLDB) 2014, Hangzho

Computing in the RAIN: a reliable array of independent nodes

The RAIN project is a research collaboration between Caltech and NASA-JPL on distributed computing and data-storage systems for future spaceborne missions. The goal of the project is to identify and develop key building blocks for reliable distributed systems built with inexpensive off-the-shelf components. The RAIN platform consists of a heterogeneous cluster of computing and/or storage nodes connected via multiple interfaces to networks configured in fault-tolerant topologies. The RAIN software components run in conjunction with operating system services and standard network protocols. Through software-implemented fault tolerance, the system tolerates multiple node, link, and switch failures, with no single point of failure. The RAIN-technology has been transferred to Rainfinity, a start-up company focusing on creating clustered solutions for improving the performance and availability of Internet data centers. In this paper, we describe the following contributions: 1) fault-tolerant interconnect topologies and communication protocols providing consistent error reporting of link failures, 2) fault management techniques based on group membership, and 3) data storage schemes based on computationally efficient error-control codes. We present several proof-of-concept applications: a highly-available video server, a highly-available Web server, and a distributed checkpointing system. Also, we describe a commercial product, Rainwall, built with the RAIN technology

DOH: A Content Delivery Peer-to-Peer Network

Many SMEs and non-pro¯t organizations su®er when their Web servers become unavailable due to °ash crowd e®ects when their web site becomes popular. One of the solutions to the °ash-crowd problem is to place the web site on a scalable CDN (Content Delivery Network) that replicates the content and distributes the load in order to improve its response time. In this paper, we present our approach to building a scalable Web Hosting environment as a CDN on top of a structured peer-to-peer system of collaborative web-servers integrated to share the load and to improve the overall system performance, scalability, availability and robustness. Unlike clusterbased solutions, it can run on heterogeneous hardware, over geographically dispersed areas. To validate and evaluate our approach, we have developed a system prototype called DOH (DKS Organized Hosting) that is a CDN implemented on top of the DKS (Distributed K-nary Search) structured P2P system with DHT (Distributed Hash table) functionality [9]. The prototype is implemented in Java, using the DKS middleware, the Jetty web-server, and a modi¯ed JavaFTP server. The proposed design of CDN has been evaluated by simulation and by evaluation experiments on the prototype