Variational algorithms to remove stationary noise. Application to microscopy imaging.

International audienceA framework and an algorithm are presented in order to remove stationary noise from images. This algorithm is called VSNR (Variational Stationary Noise Remover). It can be interpreted both as a restoration method in a Bayesian framework and as a cartoon+texture decomposition method. In numerous denoising applications the white noise assumption fails: structured patterns (e.g. stripes) appear in the images. The model described here addresses these cases. Applications are presented with images acquired using different modalities: scan- ning electron microscope, FIB-nanotomography, and an emerging fluorescence microscopy technique called SPIM (Selective Plane Illumination Microscope)

Structure-aware image denoising, super-resolution, and enhancement methods

Denoising, super-resolution and structure enhancement are classical image processing applications. The motive behind their existence is to aid our visual analysis of raw digital images. Despite tremendous progress in these fields, certain difficult problems are still open to research. For example, denoising and super-resolution techniques which possess all the following properties, are very scarce: They must preserve critical structures like corners, should be robust to the type of noise distribution, avoid undesirable artefacts, and also be fast. The area of structure enhancement also has an unresolved issue: Very little efforts have been put into designing models that can tackle anisotropic deformations in the image acquisition process. In this thesis, we design novel methods in the form of partial differential equations, patch-based approaches and variational models to overcome the aforementioned obstacles. In most cases, our methods outperform the existing approaches in both quality and speed, despite being applicable to a broader range of practical situations.Entrauschen, Superresolution und Strukturverbesserung sind klassische Anwendungen der Bildverarbeitung. Ihre Existenz bedingt sich in dem Bestreben, die visuelle Begutachtung digitaler Bildrohdaten zu unterstützen. Trotz erheblicher Fortschritte in diesen Feldern bedürfen bestimmte schwierige Probleme noch weiterer Forschung. So sind beispielsweise Entrauschungsund Superresolutionsverfahren, welche alle der folgenden Eingenschaften besitzen, sehr selten: die Erhaltung wichtiger Strukturen wie Ecken, Robustheit bezüglich der Rauschverteilung, Vermeidung unerwünschter Artefakte und niedrige Laufzeit. Auch im Gebiet der Strukturverbesserung liegt ein ungelöstes Problem vor: Bisher wurde nur sehr wenig Forschungsaufwand in die Entwicklung von Modellen investieret, welche anisotrope Deformationen in bildgebenden Verfahren bewältigen können. In dieser Arbeit entwerfen wir neue Methoden in Form von partiellen Differentialgleichungen, patch-basierten Ansätzen und Variationsmodellen um die oben erwähnten Hindernisse zu überwinden. In den meisten Fällen übertreffen unsere Methoden nicht nur qualitativ die bisher verwendeten Ansätze, sondern lösen die gestellten Aufgaben auch schneller. Zudem decken wir mit unseren Modellen einen breiteren Bereich praktischer Fragestellungen ab

From spline wavelet to sampling theory on circulant graphs and beyond– conceiving sparsity in graph signal processing

Graph Signal Processing (GSP), as the field concerned with the extension of classical signal processing concepts to the graph domain, is still at the beginning on the path toward providing a generalized theory of signal processing. As such, this thesis aspires to conceive the theory of sparse representations on graphs by traversing the cornerstones of wavelet and sampling theory on graphs. Beginning with the novel topic of graph spline wavelet theory, we introduce families of spline and e-spline wavelets, and associated filterbanks on circulant graphs, which lever- age an inherent vanishing moment property of circulant graph Laplacian matrices (and their parameterized generalizations), for the reproduction and annihilation of (exponen- tial) polynomial signals. Further, these families are shown to provide a stepping stone to generalized graph wavelet designs with adaptive (annihilation) properties. Circulant graphs, which serve as building blocks, facilitate intuitively equivalent signal processing concepts and operations, such that insights can be leveraged for and extended to more complex scenarios, including arbitrary undirected graphs, time-varying graphs, as well as associated signals with space- and time-variant properties, all the while retaining the focus on inducing sparse representations. Further, we shift from sparsity-inducing to sparsity-leveraging theory and present a novel sampling and graph coarsening framework for (wavelet-)sparse graph signals, inspired by Finite Rate of Innovation (FRI) theory and directly building upon (graph) spline wavelet theory. At its core, the introduced Graph-FRI-framework states that any K-sparse signal residing on the vertices of a circulant graph can be sampled and perfectly reconstructed from its dimensionality-reduced graph spectral representation of minimum size 2K, while the structure of an associated coarsened graph is simultaneously inferred. Extensions to arbitrary graphs can be enforced via suitable approximation schemes. Eventually, gained insights are unified in a graph-based image approximation framework which further leverages graph partitioning and re-labelling techniques for a maximally sparse graph wavelet representation.Open Acces