Toward Self-Organising Service Communities

This paper discusses a framework in which catalog service communities are built, linked for interaction, and constantly monitored and adapted over time. A catalog service community (represented as a peer node in a peer-to-peer network) in our system can be viewed as domain specific data integration mediators representing the domain knowledge and the registry information. The query routing among communities is performed to identify a set of data sources that are relevant to answering a given query. The system monitors the interactions between the communities to discover patterns that may lead to restructuring of the network (e.g., irrelevant peers removed, new relationships created, etc.)

The Requirements for Ontologies in Medical Data Integration: A Case Study

Evidence-based medicine is critically dependent on three sources of information: a medical knowledge base, the patients medical record and knowledge of available resources, including where appropriate, clinical protocols. Patient data is often scattered in a variety of databases and may, in a distributed model, be held across several disparate repositories. Consequently addressing the needs of an evidence-based medicine community presents issues of biomedical data integration, clinical interpretation and knowledge management. This paper outlines how the Health-e-Child project has approached the challenge of requirements specification for (bio-) medical data integration, from the level of cellular data, through disease to that of patient and population. The approach is illuminated through the requirements elicitation and analysis of Juvenile Idiopathic Arthritis (JIA), one of three diseases being studied in the EC-funded Health-e-Child project.Comment: 6 pages, 1 figure. Presented at the 11th International Database Engineering & Applications Symposium (Ideas2007). Banff, Canada September 200

EPOS : evolving personal to organizational knowledge spaces

EPOS will leverage the user´s personal workspace with its manyfold native information structures to his personal knowledge space and in cooperation with other personal workspaces contribute to the organizational knowledge space which is represented in the organizational memory. This first milestone presents results from the project´s first year in the areas of the personal informational model, user observation for context elicitation, collaborative information retrieval and information visualization

Pseudo-contractions as Gentle Repairs

Updating a knowledge base to remove an unwanted consequence is a challenging task. Some of the original sentences must be either deleted or weakened in such a way that the sentence to be removed is no longer entailed by the resulting set. On the other hand, it is desirable that the existing knowledge be preserved as much as possible, minimising the loss of information. Several approaches to this problem can be found in the literature. In particular, when the knowledge is represented by an ontology, two different families of frameworks have been developed in the literature in the past decades with numerous ideas in common but with little interaction between the communities: applications of AGM-like Belief Change and justification-based Ontology Repair. In this paper, we investigate the relationship between pseudo-contraction operations and gentle repairs. Both aim to avoid the complete deletion of sentences when replacing them with weaker versions is enough to prevent the entailment of the unwanted formula. We show the correspondence between concepts on both sides and investigate under which conditions they are equivalent. Furthermore, we propose a unified notation for the two approaches, which might contribute to the integration of the two areas

GridVine: an Infrastructure for Peer Information Management

GridVine is a semantic overlay infrastructure based on a peer-to-peer (P2P) access structure. Built following the principle of data independence, it separates a logical layer — in which data, schemas, and schema mappings are managed — from a physical layer consisting of a structured P2P network supporting decentralized indexing, key load-balancing, and efficient routing. The system is decentralized, yet fosters semantic interoperability through pair-wise schema mappings and query reformulation. GridVine’s heterogeneous but semantically related information sources can be queried transparently using iterative query reformulation. The authors discuss a reference implementation of the system and several mechanisms for resolving queries collaboratively

A P2P Integration Architecture for Protein Resources

The availability of a direct pathway from a primary sequence (denovo or DNA derived) to macromolecular structure to biological function using computer-based tools is the ultimate goal for a protein scientist. Today\u27s state of the art protein resources and on-going research and experiments provide the raw data that can enable protein scientists to achieve at least some steps of this goal. Thus, protein scientists are looking towards taking their benchtop research from the specific to a much broader base of using the large resources of available electronic information. However, currently the burden falls on the scientist to manually interface with each data resource, integrate the required information, and then finally interpret the results. Their discoveries are impeded by the lack of tools that can not only bring integrated information from several known data resources, but also weave in information as it is discovered and brought online by other research groups. We propose a novel peer-to-peer based architecture that allows protein scientists to share resources in the form of data and tools within their community, facilitating ad hoc, decentralized sharing of data. In this paper, we present an overview of this integration architecture and briefly describe the tools that are essential to this framework