3,459 research outputs found
ImplementaciĂłn frecuencial de las ecuaciones de Euler-Lagrange para registro variacional de imagen
In this paper, a novel theoretical framework defined
in the frequency domain for variational non-parametric image
registration is proposed. It provides more efficient implementations
than existing theoretical approaches for the most common
registration techniques. The presented frequency domain
analysis adds simplicity to the variational image registration
implementations and allows for an easy extension to higher
dimensions by using the multidimensional Fourier transform of
multidimensional signals.Este trabajo estĂĄ financiado por el Ministerio de Ciencia y
TecnoloĂıa, bajo el proyecto TEC2006-13338/TCM
Diffeomorphic Metric Mapping and Probabilistic Atlas Generation of Hybrid Diffusion Imaging based on BFOR Signal Basis
We propose a large deformation diffeomorphic metric mapping algorithm to
align multiple b-value diffusion weighted imaging (mDWI) data, specifically
acquired via hybrid diffusion imaging (HYDI), denoted as LDDMM-HYDI. We then
propose a Bayesian model for estimating the white matter atlas from HYDIs. We
adopt the work given in Hosseinbor et al. (2012) and represent the q-space
diffusion signal with the Bessel Fourier orientation reconstruction (BFOR)
signal basis. The BFOR framework provides the representation of mDWI in the
q-space and thus reduces memory requirement. In addition, since the BFOR signal
basis is orthonormal, the L2 norm that quantifies the differences in the
q-space signals of any two mDWI datasets can be easily computed as the sum of
the squared differences in the BFOR expansion coefficients. In this work, we
show that the reorientation of the -space signal due to spatial
transformation can be easily defined on the BFOR signal basis. We incorporate
the BFOR signal basis into the LDDMM framework and derive the gradient descent
algorithm for LDDMM-HYDI with explicit orientation optimization. Additionally,
we extend the previous Bayesian atlas estimation framework for scalar-valued
images to HYDIs and derive the expectation-maximization algorithm for solving
the HYDI atlas estimation problem. Using real HYDI datasets, we show the
Bayesian model generates the white matter atlas with anatomical details.
Moreover, we show that it is important to consider the variation of mDWI
reorientation due to a small change in diffeomorphic transformation in the
LDDMM-HYDI optimization and to incorporate the full information of HYDI for
aligning mDWI
Bayesian data assimilation in shape registration
In this paper we apply a Bayesian framework to the problem of geodesic curve matching. Given a template curve, the geodesic equations provide a mapping from initial conditions\ud
for the conjugate momentum onto topologically equivalent shapes. Here, we aim to recover the well defined posterior distribution on the initial momentum which gives rise to observed points on the target curve; this is achieved by explicitly including a reparameterisation in the formulation. Appropriate priors are chosen for the functions which together determine this field and the positions of the observation points, the initial momentum p0 and the reparameterisation vector field v, informed by regularity results about the forward model. Having done this, we illustrate how Maximum Likelihood Estimators (MLEs) can be used to find regions of high posterior density, but also how we can apply recently developed MCMC methods on function spaces to characterise the whole of the posterior density. These illustrative examples also include scenarios where the posterior distribution is multimodal and irregular, leading us to the conclusion that knowledge of a state of global maximal posterior density does not always give us the whole picture, and full posterior sampling can give better quantification of likely states and the overall uncertainty inherent in the problem
Robust similarity registration technique for volumetric shapes represented by characteristic functions
This paper proposes a novel similarity registration technique for volumetric shapes implicitly represented by their characteristic functions (CFs). Here, the calculation of rotation parameters is considered as a spherical crosscorrelation problem and the solution is therefore found using the standard phase correlation technique facilitated by principal components analysis (PCA).Thus, fast Fourier transform (FFT) is employed to vastly improve efficiency and robustness. Geometric moments are then used for shape scale estimation which is independent from rotation and translation parameters. It is numericallydemonstrated that our registration method is able to handle shapes with various topologies and robust to noise and initial poses. Further validation of our method is performed by registering a lung database
Playing with Duality: An Overview of Recent Primal-Dual Approaches for Solving Large-Scale Optimization Problems
Optimization methods are at the core of many problems in signal/image
processing, computer vision, and machine learning. For a long time, it has been
recognized that looking at the dual of an optimization problem may drastically
simplify its solution. Deriving efficient strategies which jointly brings into
play the primal and the dual problems is however a more recent idea which has
generated many important new contributions in the last years. These novel
developments are grounded on recent advances in convex analysis, discrete
optimization, parallel processing, and non-smooth optimization with emphasis on
sparsity issues. In this paper, we aim at presenting the principles of
primal-dual approaches, while giving an overview of numerical methods which
have been proposed in different contexts. We show the benefits which can be
drawn from primal-dual algorithms both for solving large-scale convex
optimization problems and discrete ones, and we provide various application
examples to illustrate their usefulness
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