1,118 research outputs found
Parameterized Algorithms for Directed Maximum Leaf Problems
We prove that finding a rooted subtree with at least leaves in a digraph
is a fixed parameter tractable problem. A similar result holds for finding
rooted spanning trees with many leaves in digraphs from a wide family
that includes all strong and acyclic digraphs. This settles completely an open
question of Fellows and solves another one for digraphs in . Our
algorithms are based on the following combinatorial result which can be viewed
as a generalization of many results for a `spanning tree with many leaves' in
the undirected case, and which is interesting on its own: If a digraph of order with minimum in-degree at least 3 contains a rooted
spanning tree, then contains one with at least leaves
On the Approximability of Digraph Ordering
Given an n-vertex digraph D = (V, A) the Max-k-Ordering problem is to compute
a labeling maximizing the number of forward edges, i.e.
edges (u,v) such that (u) < (v). For different values of k, this
reduces to Maximum Acyclic Subgraph (k=n), and Max-Dicut (k=2). This work
studies the approximability of Max-k-Ordering and its generalizations,
motivated by their applications to job scheduling with soft precedence
constraints. We give an LP rounding based 2-approximation algorithm for
Max-k-Ordering for any k={2,..., n}, improving on the known
2k/(k-1)-approximation obtained via random assignment. The tightness of this
rounding is shown by proving that for any k={2,..., n} and constant
, Max-k-Ordering has an LP integrality gap of 2 -
for rounds of the
Sherali-Adams hierarchy.
A further generalization of Max-k-Ordering is the restricted maximum acyclic
subgraph problem or RMAS, where each vertex v has a finite set of allowable
labels . We prove an LP rounding based
approximation for it, improving on the
approximation recently given by Grandoni et al.
(Information Processing Letters, Vol. 115(2), Pages 182-185, 2015). In fact,
our approximation algorithm also works for a general version where the
objective counts the edges which go forward by at least a positive offset
specific to each edge.
The minimization formulation of digraph ordering is DAG edge deletion or
DED(k), which requires deleting the minimum number of edges from an n-vertex
directed acyclic graph (DAG) to remove all paths of length k. We show that
both, the LP relaxation and a local ratio approach for DED(k) yield
k-approximation for any .Comment: 21 pages, Conference version to appear in ESA 201
Partition MCMC for inference on acyclic digraphs
Acyclic digraphs are the underlying representation of Bayesian networks, a
widely used class of probabilistic graphical models. Learning the underlying
graph from data is a way of gaining insights about the structural properties of
a domain. Structure learning forms one of the inference challenges of
statistical graphical models.
MCMC methods, notably structure MCMC, to sample graphs from the posterior
distribution given the data are probably the only viable option for Bayesian
model averaging. Score modularity and restrictions on the number of parents of
each node allow the graphs to be grouped into larger collections, which can be
scored as a whole to improve the chain's convergence. Current examples of
algorithms taking advantage of grouping are the biased order MCMC, which acts
on the alternative space of permuted triangular matrices, and non ergodic edge
reversal moves.
Here we propose a novel algorithm, which employs the underlying combinatorial
structure of DAGs to define a new grouping. As a result convergence is improved
compared to structure MCMC, while still retaining the property of producing an
unbiased sample. Finally the method can be combined with edge reversal moves to
improve the sampler further.Comment: Revised version. 34 pages, 16 figures. R code available at
https://github.com/annlia/partitionMCM
Layout of Graphs with Bounded Tree-Width
A \emph{queue layout} of a graph consists of a total order of the vertices,
and a partition of the edges into \emph{queues}, such that no two edges in the
same queue are nested. The minimum number of queues in a queue layout of a
graph is its \emph{queue-number}. A \emph{three-dimensional (straight-line
grid) drawing} of a graph represents the vertices by points in
and the edges by non-crossing line-segments. This paper contributes three main
results:
(1) It is proved that the minimum volume of a certain type of
three-dimensional drawing of a graph is closely related to the queue-number
of . In particular, if is an -vertex member of a proper minor-closed
family of graphs (such as a planar graph), then has a drawing if and only if has O(1) queue-number.
(2) It is proved that queue-number is bounded by tree-width, thus resolving
an open problem due to Ganley and Heath (2001), and disproving a conjecture of
Pemmaraju (1992). This result provides renewed hope for the positive resolution
of a number of open problems in the theory of queue layouts.
(3) It is proved that graphs of bounded tree-width have three-dimensional
drawings with O(n) volume. This is the most general family of graphs known to
admit three-dimensional drawings with O(n) volume.
The proofs depend upon our results regarding \emph{track layouts} and
\emph{tree-partitions} of graphs, which may be of independent interest.Comment: This is a revised version of a journal paper submitted in October
2002. This paper incorporates the following conference papers: (1) Dujmovic',
Morin & Wood. Path-width and three-dimensional straight-line grid drawings of
graphs (GD'02), LNCS 2528:42-53, Springer, 2002. (2) Wood. Queue layouts,
tree-width, and three-dimensional graph drawing (FSTTCS'02), LNCS
2556:348--359, Springer, 2002. (3) Dujmovic' & Wood. Tree-partitions of
-trees with applications in graph layout (WG '03), LNCS 2880:205-217, 200
From Finite Automata to Regular Expressions and Back--A Summary on Descriptional Complexity
The equivalence of finite automata and regular expressions dates back to the
seminal paper of Kleene on events in nerve nets and finite automata from 1956.
In the present paper we tour a fragment of the literature and summarize results
on upper and lower bounds on the conversion of finite automata to regular
expressions and vice versa. We also briefly recall the known bounds for the
removal of spontaneous transitions (epsilon-transitions) on non-epsilon-free
nondeterministic devices. Moreover, we report on recent results on the average
case descriptional complexity bounds for the conversion of regular expressions
to finite automata and brand new developments on the state elimination
algorithm that converts finite automata to regular expressions.Comment: In Proceedings AFL 2014, arXiv:1405.527
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