A survey of parameterized algorithms and the complexity of edge modification

The survey is a comprehensive overview of the developing area of parameterized algorithms for graph modification problems. It describes state of the art in kernelization, subexponential algorithms, and parameterized complexity of graph modification. The main focus is on edge modification problems, where the task is to change some adjacencies in a graph to satisfy some required properties. To facilitate further research, we list many open problems in the area.publishedVersio

Order-Related Problems Parameterized by Width

In the main body of this thesis, we study two different order theoretic problems. The first problem, called Completion of an Ordering, asks to extend a given finite partial order to a complete linear order while respecting some weight constraints. The second problem is an order reconfiguration problem under width constraints. While the Completion of an Ordering problem is NP-complete, we show that it lies in FPT when parameterized by the interval width of ρ. This ordering problem can be used to model several ordering problems stemming from diverse application areas, such as graph drawing, computational social choice, and computer memory management. Each application yields a special partial order ρ. We also relate the interval width of ρ to parameterizations for these problems that have been studied earlier in the context of these applications, sometimes improving on parameterized algorithms that have been developed for these parameterizations before. This approach also gives some practical sub-exponential time algorithms for ordering problems. In our second main result, we combine our parameterized approach with the paradigm of solution diversity. The idea of solution diversity is that instead of aiming at the development of algorithms that output a single optimal solution, the goal is to investigate algorithms that output a small set of sufficiently good solutions that are sufficiently diverse from one another. In this way, the user has the opportunity to choose the solution that is most appropriate to the context at hand. It also displays the richness of the solution space. There, we show that the considered diversity version of the Completion of an Ordering problem is fixed-parameter tractable with respect to natural paramaters that capture the notion of diversity and the notion of sufficiently good solutions. We apply this algorithm in the study of the Kemeny Rank Aggregation class of problems, a well-studied class of problems lying in the intersection of order theory and social choice theory. Up to this point, we have been looking at problems where the goal is to find an optimal solution or a diverse set of good solutions. In the last part, we shift our focus from finding solutions to studying the solution space of a problem. There we consider the following order reconfiguration problem: Given a graph G together with linear orders τ and τ ′ of the vertices of G, can one transform τ into τ ′ by a sequence of swaps of adjacent elements in such a way that at each time step the resulting linear order has cutwidth (pathwidth) at most w? We show that this problem always has an affirmative answer when the input linear orders τ and τ ′ have cutwidth (pathwidth) at most w/2. Using this result, we establish a connection between two apparently unrelated problems: the reachability problem for two-letter string rewriting systems and the graph isomorphism problem for graphs of bounded cutwidth. This opens an avenue for the study of the famous graph isomorphism problem using techniques from term rewriting theory. In addition to the main part of this work, we present results on two unrelated problems, namely on the Steiner Tree problem and on the Intersection Non-emptiness problem from automata theory.Doktorgradsavhandlin

The bidimensionality theory and its algorithmic applications

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Mathematics, 2005.Includes bibliographical references (p. 201-219).Our newly developing theory of bidimensional graph problems provides general techniques for designing efficient fixed-parameter algorithms and approximation algorithms for NP- hard graph problems in broad classes of graphs. This theory applies to graph problems that are bidimensional in the sense that (1) the solution value for the k x k grid graph (and similar graphs) grows with k, typically as Q(k²), and (2) the solution value goes down when contracting edges and optionally when deleting edges. Examples of such problems include feedback vertex set, vertex cover, minimum maximal matching, face cover, a series of vertex- removal parameters, dominating set, edge dominating set, r-dominating set, connected dominating set, connected edge dominating set, connected r-dominating set, and unweighted TSP tour (a walk in the graph visiting all vertices). Bidimensional problems have many structural properties; for example, any graph embeddable in a surface of bounded genus has treewidth bounded above by the square root of the problem's solution value. These properties lead to efficient-often subexponential-fixed-parameter algorithms, as well as polynomial-time approximation schemes, for many minor-closed graph classes. One type of minor-closed graph class of particular relevance has bounded local treewidth, in the sense that the treewidth of a graph is bounded above in terms of the diameter; indeed, we show that such a bound is always at most linear. The bidimensionality theory unifies and improves several previous results.(cont.) The theory is based on algorithmic and combinatorial extensions to parts of the Robertson-Seymour Graph Minor Theory, in particular initiating a parallel theory of graph contractions. The foundation of this work is the topological theory of drawings of graphs on surfaces and our results regarding the relation (the linearity) of the size of the largest grid minor in terms of treewidth in bounded-genus graphs and more generally in graphs excluding a fixed graph H as a minor. In this thesis, we also develop the algorithmic theory of vertex separators, and its relation to the embeddings of certain metric spaces. Unlike in the edge case, we show that embeddings into L₁ (and even Euclidean embeddings) are insufficient, but that the additional structure provided by many embedding theorems does suffice for our purposes. We obtain an O[sq. root( log n)] approximation for min-ratio vertex cuts in general graphs, based on a new semidefinite relaxation of the problem, and a tight analysis of the integrality gap which is shown to be [theta][sq. root(log n)]. We also prove various approximate max-flow/min-vertex- cut theorems, which in particular give a constant-factor approximation for min-ratio vertex cuts in any excluded-minor family of graphs. Previously, this was known only for planar graphs, and for general excluded-minor families the best-known ratio was O(log n). These results have a number of applications. We exhibit an O[sq. root (log n)] pseudo-approximation for finding balanced vertex separators in general graphs.(cont.) Furthermore, we obtain improved approximation ratios for treewidth: In any graph of treewidth k, we show how to find a tree decomposition of width at most O(k[sq. root(log k)]), whereas previous algorithms yielded O(k log k). For graphs excluding a fixed graph as a minor, we give a constant-factor approximation for the treewidth; this via the bidimensionality theory can be used to obtain the first polynomial-time approximation schemes for problems like minimum feedback vertex set and minimum connected dominating set in such graphs.by MohammadTaghi Hajiaghayi.Ph.D

New Approaches to Classic Graph-Embedding Problems - Orthogonal Drawings & Constrained Planarity

Drawings of graphs are often used to represent a given data set in a human-readable way. In this thesis, we consider different classic algorithmic problems that arise when automatically generating graph drawings. More specifically, we solve some open problems in the context of orthogonal drawings and advance the current state of research on the problems clustered planarity and simultaneous planarity

Parameterized algorithms and computational lower bounds: a structural approach

Many problems of practical significance are known to be NP-hard, and hence, are unlikely to be solved by polynomial-time algorithms. There are several ways to cope with the NP-hardness of a certain problem. The most popular approaches include heuristic algorithms, approximation algorithms, and randomized algorithms. Recently, parameterized computation and complexity have been receiving a lot of attention. By taking advantage of small or moderate parameter values, parameterized algorithms provide new venues for practically solving problems that are theoretically intractable. In this dissertation, we design efficient parameterized algorithms for several wellknown NP-hard problems and prove strong lower bounds for some others. In doing so, we place emphasis on the development of new techniques that take advantage of the structural properties of the problems. We present a simple parameterized algorithm for Vertex Cover that uses polynomial space and runs in time O(1.2738k + kn). It improves both the previous O(1.286k + kn)-time polynomial-space algorithm by Chen, Kanj, and Jia, and the very recent O(1.2745kk4 + kn)-time exponential-space algorithm, by Chandran and Grandoni. This algorithm stands out for both its performance and its simplicity. Essential to the design of this algorithm are several new techniques that use structural information of the underlying graph to bound the search space. For Vertex Cover on graphs with degree bounded by three, we present a still better algorithm that runs in time O(1.194k + kn), based on an âÂÂalmost-globalâ analysis of the search tree. We also show that an important structural property of the underlying graphs â the graph genus â largely dictates the computational complexity of some important graph problems including Vertex Cover, Independent Set and Dominating Set. We present a set of new techniques that allows us to prove almost tight computational lower bounds for some NP-hard problems, such as Clique, Dominating Set, Hitting Set, Set Cover, and Independent Set. The techniques are further extended to derive computational lower bounds on polynomial time approximation schemes for certain NP-hard problems. Our results illustrate a new approach to proving strong computational lower bounds for some NP-hard problems under reasonable conditions

Randomized approximation algorithms : facility location, phylogenetic networks, Nash equilibria

Despite a great effort, researchers are unable to find efficient algorithms for a number of natural computational problems. Typically, it is possible to emphasize the hardness of such problems by proving that they are at least as hard as a number of other problems. In the language of computational complexity it means proving that the problem is complete for a certain class of problems. For optimization problems, we may consider to relax the requirement of the outcome to be optimal and accept an approximate (i.e., close to optimal) solution. For many of the problems that are hard to solve optimally, it is actually possible to efficiently find close to optimal solutions. In this thesis, we study algorithms for computing such approximate solutions