Compilation techniques for irregular problems on parallel machines

Massively parallel computers have ushered in the era of teraflop computing. Even though large and powerful machines are being built, they are used by only a fraction of the computing community. The fundamental reason for this situation is that parallel machines are difficult to program. Development of compilers that automatically parallelize programs will greatly increase the use of these machines.;A large class of scientific problems can be categorized as irregular computations. In this class of computation, the data access patterns are known only at runtime, creating significant difficulties for a parallelizing compiler to generate efficient parallel codes. Some compilers with very limited abilities to parallelize simple irregular computations exist, but the methods used by these compilers fail for any non-trivial applications code.;This research presents development of compiler transformation techniques that can be used to effectively parallelize an important class of irregular programs. A central aim of these transformation techniques is to generate codes that aggressively prefetch data. Program slicing methods are used as a part of the code generation process. In this approach, a program written in a data-parallel language, such as HPF, is transformed so that it can be executed on a distributed memory machine. An efficient compiler runtime support system has been developed that performs data movement and software caching

Compiling for parallel multithreaded computation on symmetric multiprocessors

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 1998.Includes bibliographical references (p. 145-149).by Andrew Shaw.Ph.D

Parallelization of irregularly coupled regular meshes

Regular meshes are frequently used for modeling physical phenomena on both serial and parallel computers. One advantage of regular meshes is that efficient discretization schemes can be implemented in a straight forward manner. However, geometrically-complex objects, such as aircraft, cannot be easily described using a single regular mesh. Multiple interacting regular meshes are frequently used to describe complex geometries. Each mesh models a subregion of the physical domain. The meshes, or subdomains, can be processed in parallel, with periodic updates carried out to move information between the coupled meshes. In many cases, there are a relatively small number (one to a few dozen) subdomains, so that each subdomain may also be partitioned among several processors. We outline a composite run-time/compile-time approach for supporting these problems efficiently on distributed-memory machines. These methods are described in the context of a multiblock fluid dynamics problem developed at LaRC

Compiling dataflow graphs into hardware

Department Head: L. Darrell Whitley.2005 Fall.Includes bibliographical references (pages 121-126).Conventional computers are programmed by supplying a sequence of instructions that perform the desired task. A reconfigurable processor is "programmed" by specifying the interconnections between hardware components, thereby creating a "hardwired" system to do the particular task. For some applications such as image processing, reconfigurable processors can produce dramatic execution speedups. However, programming a reconfigurable processor is essentially a hardware design discipline, making programming difficult for application programmers who are only familiar with software design techniques. To bridge this gap, a programming language, called SA-C (Single Assignment C, pronounced "sassy"), has been designed for programming reconfigurable processors. The process involves two main steps - first, the SA-C compiler analyzes the input source code and produces a hardware-independent intermediate representation of the program, called a dataflow graph (DFG). Secondly, this DFG is combined with hardware-specific information to create the final configuration. This dissertation describes the design and implementation of a system that performs the DFG to hardware translation. The DFG is broken up into three sections: the data generators, the inner loop body, and the data collectors. The second of these, the inner loop body, is used to create a computational structure that is unique for each program. The other two sections are implemented by using prebuilt modules, parameterized for the particular problem. Finally, a "glue module" is created to connect the various pieces into a complete interconnection specification. The dissertation also explores optimizations that can be applied while processing the DFG, to improve performance. A technique for pipelining the inner loop body is described that uses an estimation tool for the propagation delay of the nodes within the dataflow graph. A scheme is also described that identifies subgraphs with the dataflow graph that can be replaced with lookup tables. The lookup tables provide a faster implementation than random logic in some instances

On Extracting Course-Grained Function Parallelism from C Programs

To efficiently utilize the emerging heterogeneous multi-core architecture, it is essential to exploit the inherent coarse-grained parallelism in applications. In addition to data parallelism, applications like telecommunication, multimedia, and gaming can also benefit from the exploitation of coarse-grained function parallelism. To exploit coarse-grained function parallelism, the common wisdom is to rely on programmers to explicitly express the coarse-grained data-flow between coarse-grained functions using data-flow or streaming languages. This research is set to explore another approach to exploiting coarse-grained function parallelism, that is to rely on compiler to extract coarse-grained data-flow from imperative programs. We believe imperative languages and the von Neumann programming model will still be the dominating programming languages programming model in the future. This dissertation discusses the design and implementation of a memory data-flow analysis system which extracts coarse-grained data-flow from C programs. The memory data-flow analysis system partitions a C program into a hierarchy of program regions. It then traverses the program region hierarchy from bottom up, summarizing the exposed memory access patterns for each program region, meanwhile deriving a conservative producer-consumer relations between program regions. An ensuing top-down traversal of the program region hierarchy will refine the producer-consumer relations by pruning spurious relations. We built an in-lining based prototype of the memory data-flow analysis system on top of the IMPACT compiler infrastructure. We applied the prototype to analyze the memory data-flow of several MediaBench programs. The experiment results showed that while the prototype performed reasonably well for the tested programs, the in-lining based implementation may not efficient for larger programs. Also, there is still room in improving the effectiveness of the memory data-flow analysis system. We did root cause analysis for the inaccuracy in the memory data-flow analysis results, which provided us insights on how to improve the memory data-flow analysis system in the future

A Fortran Kernel Generation Framework for Scientific Legacy Code

Quality assurance procedure is very important for software development. The complexity of modules and structure in software impedes the testing procedure and further development. For complex and poorly designed scientific software, module developers and software testers need to put a lot of extra efforts to monitor not related modules\u27 impacts and to test the whole system\u27s constraints. In addition, widely used benchmarks cannot help programmers with accurate and program specific system performance evaluation. In this situation, the generated kernels could provide considerable insight into better performance tuning. Therefore, in order to greatly improve the productivity of various scientific software engineering tasks such as performance tuning, debugging, and verification of simulation results, we developed an automatic compute kernel extraction prototype platform for complex legacy scientific code. In addition, considering that scientific research and experiment require long-term simulation procedure and the huge size of data transfer, we apply message passing based parallelization and I/O behavior optimization to highly improve the performance of the kernel extractor framework and then use profiling tools to give guidance for parallel distribution. Abnormal event detection is another important aspect for scientific research; dealing with huge observational datasets combined with simulation results it becomes not only essential but also extremely difficult. In this dissertation, for the sake of detecting high frequency event and low frequency events, we reconfigured this framework equipped with in-situ data transfer infrastructure. Through the method of combining signal processing data preprocess(decimation) with machine learning detection model to train the stream data, our framework can significantly decrease the amount of transferred data demand for concurrent data analysis (between distributed computing CPU/GPU nodes). Finally, the dissertation presents the implementation of the framework and a case study of the ACME Land Model (ALM) for demonstration. It turns out that the generated compute kernel with lower cost can be used in performance tuning experiments and quality assurance, which include debugging legacy code, verification of simulation results through single point and multiple points of variables tracking, collaborating with compiler vendors, and generating custom benchmark tests

A parallel functional language compiler for message-passing multicomputers

The research presented in this thesis is about the design and implementation of Naira, a parallel, parallelising compiler for a rich, purely functional programming language. The source language of the compiler is a subset of Haskell 1.2. The front end of Naira is written entirely in the Haskell subset being compiled. Naira has been successfully parallelised and it is the largest successfully parallelised Haskell program having achieved good absolute speedups on a network of SUN workstations. Having the same basic structure as other production compilers of functional languages, Naira's parallelisation technology should carry forward to other functional language compilers. The back end of Naira is written in C and generates parallel code in the C language which is envisioned to be run on distributed-memory machines. The code generator is based on a novel compilation scheme specified using a restricted form of Milner's 7r-calculus which achieves asynchronous communication. We present the first working implementation of this scheme on distributed-memory message-passing multicomputers with split-phase transactions. Simulated assessment of the generated parallel code indicates good parallel behaviour. Parallelism is introduced using explicit, advisory user annotations in the source' program and there are two major aspects of the use of annotations in the compiler. First, the front end of the compiler is parallelised so as to improve its efficiency at compilation time when it is compiling input programs. Secondly, the input programs to the compiler can themselves contain annotations based on which the compiler generates the multi-threaded parallel code. These, therefore, make Naira, unusually and uniquely, both a parallel and a parallelising compiler. We adopt a medium-grained approach to granularity where function applications form the unit of parallelism and load distribution. We have experimented with two different task distribution strategies, deterministic and random, and have also experimented with thread-based and quantum- based scheduling policies. Our experiments show that there is little efficiency difference for regular programs but the quantum-based scheduler is the best in programs with irregular parallelism. The compiler has been successfully built, parallelised and assessed using both idealised and realistic measurement tools: we obtained significant compilation speed-ups on a variety of simulated parallel architectures. The simulated results are supported by the best results obtained on real hardware for such a large program: we measured an absolute speedup of 2.5 on a network of 5 SUN workstations. The compiler has also been shown to have good parallelising potential, based on popular test programs. Results of assessing Naira's generated unoptimised parallel code are comparable to those produced by other successful parallel implementation projects

A Compiler-based Framework For Automatic Extraction Of Program Skeletons For Exascale Hardware/software Co-design

The design of high-performance computing architectures requires performance analysis of largescale parallel applications to derive various parameters concerning hardware design and software development. The process of performance analysis and benchmarking an application can be done in several ways with varying degrees of fidelity. One of the most cost-effective ways is to do a coarse-grained study of large-scale parallel applications through the use of program skeletons. The concept of a “program skeleton” that we discuss in this paper is an abstracted program that is derived from a larger program where source code that is determined to be irrelevant is removed for the purposes of the skeleton. In this work, we develop a semi-automatic approach for extracting program skeletons based on compiler program analysis. We demonstrate correctness of our skeleton extraction process by comparing details from communication traces, as well as show the performance speedup of using skeletons by running simulations in the SST/macro simulator. Extracting such a program skeleton from a large-scale parallel program requires a substantial amount of manual effort and often introduces human errors. We outline a semi-automatic approach for extracting program skeletons from large-scale parallel applications that reduces cost and eliminates errors inherent in manual approaches. Our skeleton generation approach is based on the use of the extensible and open-source ROSE compiler infrastructure that allows us to perform flow and dependency analysis on larger programs in order to determine what code can be removed from the program to generate a skeleton

Compiling Programs for Nonshared Memory Machines

Nonshared-memory parallel computers promise scalable performance for scientific computing needs. Unfortunately, these machines are now difficult to program because the message-passing languages available for them do not reflect the computational models used in designing algorithms. This introduces a semantic gap in the programming process which is difficult for the programmer to fill. The purpose of this research is to show how nonshared-memory machines can be programmed at a higher level than is currently possible. We do this by developing techniques for compiling shared-memory programs for execution on those architectures. The heart of the compilation process is translating references to shared memory into explicit messages between processors. To do this, we first define a formal model for distribution data structures across processor memories. Several abstract results describing the messages needed to execute a program are immediately derived from this formalism. We then develop two distinct forms of analysis to translate these formulas into actual programs. Compile-time analysis is used when enough information is available to the compiler to completely characterize the data sent in the messages. This allows excellent code to be generated for a program. Run-time analysis produces code to examine data references while the program is running. This allows dynamic generation of messages and a correct implementation of the program. While the over-head of the run-time approach is higher than the compile-time approach, run-time analysis is applicable to any program. Performance data from an initial implementation show that both approaches are practical and produce code with acceptable efficiency