1,519 research outputs found

    A Dataflow Language for Decentralised Orchestration of Web Service Workflows

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    Orchestrating centralised service-oriented workflows presents significant scalability challenges that include: the consumption of network bandwidth, degradation of performance, and single points of failure. This paper presents a high-level dataflow specification language that attempts to address these scalability challenges. This language provides simple abstractions for orchestrating large-scale web service workflows, and separates between the workflow logic and its execution. It is based on a data-driven model that permits parallelism to improve the workflow performance. We provide a decentralised architecture that allows the computation logic to be moved "closer" to services involved in the workflow. This is achieved through partitioning the workflow specification into smaller fragments that may be sent to remote orchestration services for execution. The orchestration services rely on proxies that exploit connectivity to services in the workflow. These proxies perform service invocations and compositions on behalf of the orchestration services, and carry out data collection, retrieval, and mediation tasks. The evaluation of our architecture implementation concludes that our decentralised approach reduces the execution time of workflows, and scales accordingly with the increasing size of data sets.Comment: To appear in Proceedings of the IEEE 2013 7th International Workshop on Scientific Workflows, in conjunction with IEEE SERVICES 201

    Workflow Partitioning and Deployment on the Cloud using Orchestra

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    Orchestrating service-oriented workflows is typically based on a design model that routes both data and control through a single point - the centralised workflow engine. This causes scalability problems that include the unnecessary consumption of the network bandwidth, high latency in transmitting data between the services, and performance bottlenecks. These problems are highly prominent when orchestrating workflows that are composed from services dispersed across distant geographical locations. This paper presents a novel workflow partitioning approach, which attempts to improve the scalability of orchestrating large-scale workflows. It permits the workflow computation to be moved towards the services providing the data in order to garner optimal performance results. This is achieved by decomposing the workflow into smaller sub workflows for parallel execution, and determining the most appropriate network locations to which these sub workflows are transmitted and subsequently executed. This paper demonstrates the efficiency of our approach using a set of experimental workflows that are orchestrated over Amazon EC2 and across several geographic network regions.Comment: To appear in Proceedings of the IEEE/ACM 7th International Conference on Utility and Cloud Computing (UCC 2014

    DALiuGE: A Graph Execution Framework for Harnessing the Astronomical Data Deluge

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    The Data Activated Liu Graph Engine - DALiuGE - is an execution framework for processing large astronomical datasets at a scale required by the Square Kilometre Array Phase 1 (SKA1). It includes an interface for expressing complex data reduction pipelines consisting of both data sets and algorithmic components and an implementation run-time to execute such pipelines on distributed resources. By mapping the logical view of a pipeline to its physical realisation, DALiuGE separates the concerns of multiple stakeholders, allowing them to collectively optimise large-scale data processing solutions in a coherent manner. The execution in DALiuGE is data-activated, where each individual data item autonomously triggers the processing on itself. Such decentralisation also makes the execution framework very scalable and flexible, supporting pipeline sizes ranging from less than ten tasks running on a laptop to tens of millions of concurrent tasks on the second fastest supercomputer in the world. DALiuGE has been used in production for reducing interferometry data sets from the Karl E. Jansky Very Large Array and the Mingantu Ultrawide Spectral Radioheliograph; and is being developed as the execution framework prototype for the Science Data Processor (SDP) consortium of the Square Kilometre Array (SKA) telescope. This paper presents a technical overview of DALiuGE and discusses case studies from the CHILES and MUSER projects that use DALiuGE to execute production pipelines. In a companion paper, we provide in-depth analysis of DALiuGE's scalability to very large numbers of tasks on two supercomputing facilities.Comment: 31 pages, 12 figures, currently under review by Astronomy and Computin

    A scientific workflow framework for scientific data querying and processing

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    We are at the beginning of the new era of ``e-science\u27\u27. Researchers in many areas of science, especially in astrophysics, physics, climatology and biology, are now facing tremendous increases in data volumes, as well as corresponding data analysis tools. These increased data and tools demand a better framework to manage the new generation scientific research cycle from data capture, data curation to data analysis, data query and data visualization. Scientific workflows are proving to be one of the key technologies for scientists to formalize and structure complex scientific processes to enable and accelerate many significant scientific discoveries. Although several scientific workflow management systems (SWFMSs) are developed, a formal scientific workflow composition framework, in which workflows and constructs can be composed arbitrarily to process and query collectional scientific data sets, is still to be proposed. In this thesis, I make several contributions towards formalizing a scientific workflow composition framework. First, We proposed a dataflow-based scientific workflow composition model including a scientific workflow model that separates the declaration of the workflow interface from the definition of its functional body; and a set of workflow constructs, including Map, Reduce, Tree, Loop, Conditional, and Curry, which are fully compositional one with another. Our workflow composition framework is unique in that workflows are the only operands for composition; in this way, our approach elegantly solves the two-world problem in existing composition frameworks, in which composition needs to deal with both the world of tasks and the world of workflows. Second, We formalized a collection-oriented data model, called collectional data model, to model hierarchical collection-oriented scientific data, and a set of well-defined operators to manipulate and query such data. To our best knowledge, this is the first algebraic approach to modeling collection-oriented scientific data. Finally, we developed a prototype scientific workflow management system, called View. The View system implemented the above techniques in its subsystems and integrated them within a service-oriented architecture

    Towards Collaborative Scientific Workflow Management System

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    The big data explosion phenomenon has impacted several domains, starting from research areas to divergent of business models in recent years. As this intensive amount of data opens up the possibilities of several interesting knowledge discoveries, over the past few years divergent of research domains have undergone the shift of trend towards analyzing those massive amount data. Scientific Workflow Management System (SWfMS) has gained much popularity in recent years in accelerating those data-intensive analyses, visualization, and discoveries of important information. Data-intensive tasks are often significantly time-consuming and complex in nature and hence SWfMSs are designed to efficiently support the specification, modification, execution, failure handling, and monitoring of the tasks in a scientific workflow. As far as the complexity, dimension, and volume of data are concerned, their effective analysis or management often become challenging for an individual and requires collaboration of multiple scientists instead. Hence, the notion of 'Collaborative SWfMS' was coined - which gained significant interest among researchers in recent years as none of the existing SWfMSs directly support real-time collaboration among scientists. In terms of collaborative SWfMSs, consistency management in the face of conflicting concurrent operations of the collaborators is a major challenge for its highly interconnected document structure among the computational modules - where any minor change in a part of the workflow can highly impact the other part of the collaborative workflow for the datalink relation among them. In addition to the consistency management, studies show several other challenges that need to be addressed towards a successful design of collaborative SWfMSs, such as sub-workflow composition and execution by different sub-groups, relationship between scientific workflows and collaboration models, sub-workflow monitoring, seamless integration and access control of the workflow components among collaborators and so on. In this thesis, we propose a locking scheme to facilitate consistency management in collaborative SWfMSs. The proposed method works by locking workflow components at a granular attribute level in addition to supporting locks on a targeted part of the collaborative workflow. We conducted several experiments to analyze the performance of the proposed method in comparison to related existing methods. Our studies show that the proposed method can reduce the average waiting time of a collaborator by up to 36% while increasing the average workflow update rate by up to 15% in comparison to existing descendent modular level locking techniques for collaborative SWfMSs. We also propose a role-based access control technique for the management of collaborative SWfMSs. We leverage the Collaborative Interactive Application Methodology (CIAM) for the investigation of role-based access control in the context of collaborative SWfMSs. We present our proposed method with a use-case of Plant Phenotyping and Genotyping research domain. Recent study shows that the collaborative SWfMSs often different sets of opportunities and challenges. From our investigations on existing research works towards collaborative SWfMSs and findings of our prior two studies, we propose an architecture of collaborative SWfMSs. We propose - SciWorCS - a Collaborative Scientific Workflow Management System as a proof of concept of the proposed architecture; which is the first of its kind to the best of our knowledge. We present several real-world use-cases of scientific workflows using SciWorCS. Finally, we conduct several user studies using SciWorCS comprising different real-world scientific workflows (i.e., from myExperiment) to understand the user behavior and styles of work in the context of collaborative SWfMSs. In addition to evaluating SciWorCS, the user studies reveal several interesting facts which can significantly contribute in the research domain, as none of the existing methods considered such empirical studies, and rather relied only on computer generated simulated studies for evaluation
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