Optical signatures of quantum delocalization over extended domains in photosynthetic membranes

The prospect of coherent dynamics and excitonic delocalization across several light-harvesting structures in photosynthetic membranes is of considerable interest, but challenging to explore experimentally. Here we demonstrate theoretically that the excitonic delocalization across extended domains involving several light-harvesting complexes can lead to unambiguous signatures in the optical response, specifically, linear absorption spectra. We characterize, under experimentally established conditions of molecular assembly and protein-induced inhomogeneities, the optical absorption in these arrays from polarized and unpolarized excitation, and demonstrate that it can be used as a diagnostic tool to determine the coherent coupling among iso-energetic light-harvesting structures. The knowledge of these couplings would then provide further insight into the dynamical properties of transfer, such as facilitating the accurate determination of F\"orster rates.Comment: 4 figures and Supplementary information with 7 figures. To appear in Journal of physical chemistry A, 201

Scanamorphos: a map-making software for Herschel and similar scanning bolometer arrays

Scanamorphos is one of the public softwares available to post-process scan observations performed with the Herschel photometer arrays. This post-processing mainly consists in subtracting the total low-frequency noise (both its thermal and non-thermal components), masking high-frequency artefacts such as cosmic ray hits, and projecting the data onto a map. Although it was developed for Herschel, it is also applicable with minimal adjustment to scan observations made with some other imaging arrays subjected to low-frequency noise, provided they entail sufficient redundancy; it was successfully applied to P-Artemis, an instrument operating on the APEX telescope. Contrary to matrix-inversion softwares and high-pass filters, Scanamorphos does not assume any particular noise model, and does not apply any Fourier-space filtering to the data, but is an empirical tool using purely the redundancy built in the observations -- taking advantage of the fact that each portion of the sky is sampled at multiple times by multiple bolometers. It is an interactive software in the sense that the user is allowed to optionally visualize and control results at each intermediate step, but the processing is fully automated. This paper describes the principles and algorithm of Scanamorphos and presents several examples of application.Comment: This is the final version as accepted by PASP (on July 27, 2013). A copy with much better-quality figures is available on http://www2.iap.fr/users/roussel/herschel

PILOT: a balloon-borne experiment to measure the polarized FIR emission of dust grains in the interstellar medium

Future cosmology space missions will concentrate on measuring the polarization of the Cosmic Microwave Background, which potentially carries invaluable information about the earliest phases of the evolution of our universe. Such ambitious projects will ultimately be limited by the sensitivity of the instrument and by the accuracy at which polarized foreground emission from our own Galaxy can be subtracted out. We present the PILOT balloon project which will aim at characterizing one of these foreground sources, the polarization of the dust continuum emission in the diffuse interstellar medium. The PILOT experiment will also constitute a test-bed for using multiplexed bolometer arrays for polarization measurements. We present the results of ground tests obtained just before the first flight of the instrument.Comment: 17 pages, 13 figures. Presented at SPIE, Millimeter, Submillimeter, and Far-Infrared Detectors and Instrumentation for Astronomy VII. To be published in Proc. SPIE volume 915

Realistic Simulations of the Galactic Polarized Foreground: Consequences for 21-cm Reionization Detection Experiments

Experiments designed to measure the redshifted 21~cm line from the Epoch of Reionization (EoR) are challenged by strong astrophysical foreground contamination, ionospheric distortions, complex instrumental response and other different types of noise (e.g. radio frequency interference). The astrophysical foregrounds are dominated by diffuse synchrotron emission from our Galaxy. Here we present a simulation of the Galactic emission used as a foreground module for the LOFAR- EoR key science project end-to-end simulations. The simulation produces total and polarized intensity over $10^\circ \times 10^\circ$ maps of the Galactic synchrotron and free-free emission, including all observed characteristics of the emission: spatial fluctuations of amplitude and spectral index of the synchrotron emission, together with Faraday rotation effects. The importance of these simulations arise from the fact that the Galactic polarized emission could behave in a manner similar to the EoR signal along the frequency direction. As a consequence, an improper instrumental calibration will give rise to leakages of the polarized to the total signal and mask the desired EoR signal. In this paper we address this for the first time through realistic simulations.Comment: 14 pages, 8 figures, published in MNRA

Imaging the first light: experimental challenges and future perspectives in the observation of the Cosmic Microwave Background Anisotropy

Measurements of the cosmic microwave background (CMB) allow high precision observation of the Last Scattering Surface at redshift $z\sim$1100. After the success of the NASA satellite COBE, that in 1992 provided the first detection of the CMB anisotropy, results from many ground-based and balloon-borne experiments have showed a remarkable consistency between different results and provided quantitative estimates of fundamental cosmological properties. During 2003 the team of the NASA WMAP satellite has released the first improved full-sky maps of the CMB since COBE, leading to a deeper insight into the origin and evolution of the Universe. The ESA satellite Planck, scheduled for launch in 2007, is designed to provide the ultimate measurement of the CMB temperature anisotropy over the full sky, with an accuracy that will be limited only by astrophysical foregrounds, and robust detection of polarisation anisotropy. In this paper we review the experimental challenges in high precision CMB experiments and discuss the future perspectives opened by second and third generation space missions like WMAP and Planck.Comment: To be published in "Recent Research Developments in Astronomy & Astrophysics Astrophysiscs" - Vol I

Chromatin: a tunable spring at work inside chromosomes

This paper focuses on mechanical aspects of chromatin biological functioning. Within a basic geometric modeling of the chromatin assembly, we give for the first time the complete set of elastic constants (twist and bend persistence lengths, stretch modulus and twist-stretch coupling constant) of the so-called 30-nm chromatin fiber, in terms of DNA elastic properties and geometric properties of the fiber assembly. The computation naturally embeds the fiber within a current analytical model known as the ``extensible worm-like rope'', allowing a straightforward prediction of the force-extension curves. We show that these elastic constants are strongly sensitive to the linker length, up to 1 bp, or equivalently to its twist, and might locally reach very low values, yielding a highly flexible and extensible domain in the fiber. In particular, the twist-stretch coupling constant, reflecting the chirality of the chromatin fiber, exhibits steep variations and sign changes when the linker length is varied. We argue that this tunable elasticity might be a key feature for chromatin function, for instance in the initiation and regulation of transcription.Comment: 38 pages 15 figure

Space-based Aperture Array For Ultra-Long Wavelength Radio Astronomy

The past decade has seen the rise of various radio astronomy arrays, particularly for low-frequency observations below 100MHz. These developments have been primarily driven by interesting and fundamental scientific questions, such as studying the dark ages and epoch of re-ionization, by detecting the highly red-shifted 21cm line emission. However, Earth-based radio astronomy below frequencies of 30MHz is severely restricted due to man-made interference, ionospheric distortion and almost complete non-transparency of the ionosphere below 10MHz. Therefore, this narrow spectral band remains possibly the last unexplored frequency range in radio astronomy. A straightforward solution to study the universe at these frequencies is to deploy a space-based antenna array far away from Earths' ionosphere. Various studies in the past were principally limited by technology and computing resources, however current processing and communication trends indicate otherwise. We briefly present the achievable science cases, and discuss the system design for selected scenarios, such as extra-galactic surveys. An extensive discussion is presented on various sub-systems of the potential satellite array, such as radio astronomical antenna design, the on-board signal processing, communication architectures and joint space-time estimation of the satellite network. In light of a scalable array and to avert single point of failure, we propose both centralized and distributed solutions for the ULW space-based array. We highlight the benefits of various deployment locations and summarize the technological challenges for future space-based radio arrays.Comment: Submitte

The Case for Combining a Large Low-Band Very High Frequency Transmitter With Multiple Receiving Arrays for Geospace Research: A Geospace Radar

We argue that combining a high‐power, large‐aperture radar transmitter with several large‐aperture receiving arrays to make a geospace radar—a radar capable of probing near‐Earth space from the upper troposphere through to the solar corona—would transform geospace research. We review the emergence of incoherent scatter radar in the 1960s as an agent that unified early, pioneering research in geospace in a common theoretical, experimental, and instrumental framework, and we suggest that a geospace radar would have a similar effect on future developments in space weather research. We then discuss recent developments in radio‐array technology that could be exploited in the development of a geospace radar with new or substantially improved capabilities compared to the radars in use presently. A number of applications for a geospace radar with the new and improved capabilities are reviewed including studies of meteor echoes, mesospheric and stratospheric turbulence, ionospheric flows, plasmaspheric and ionospheric irregularities, and reflection from the solar corona and coronal mass ejections. We conclude with a summary of technical requirements

The Bolocam Galactic Plane Survey: Survey Description and Data Reduction

We present the Bolocam Galactic Plane Survey (BGPS), a 1.1 mm continuum survey at 33" effective resolution of 170 square degrees of the Galactic Plane visible from the northern hemisphere. The survey is contiguous over the range -10.5 < l < 90.5, |b| < 0.5 and encompasses 133 square degrees, including some extended regions |b| < 1.5. In addition to the contiguous region, four targeted regions in the outer Galaxy were observed: IC1396, a region towards the Perseus Arm, W3/4/5, and Gem OB1. The BGPS has detected approximately 8400 clumps over the entire area to a limiting non-uniform 1-sigma noise level in the range 11 to 53 mJy/beam in the inner Galaxy. The BGPS source catalog is presented in a companion paper (Rosolowsky et al. 2010). This paper details the survey observations and data reduction methods for the images. We discuss in detail the determination of astrometric and flux density calibration uncertainties and compare our results to the literature. Data processing algorithms that separate astronomical signals from time-variable atmospheric fluctuations in the data time-stream are presented. These algorithms reproduce the structure of the astronomical sky over a limited range of angular scales and produce artifacts in the vicinity of bright sources. Based on simulations, we find that extended emission on scales larger than about 5.9' is nearly completely attenuated (> 90%) and the linear scale at which the attenuation reaches 50% is 3.8'. Comparison with other millimeter-wave data sets implies a possible systematic offset in flux calibration, for which no cause has been discovered. This presentation serves as a companion and guide to the public data release through NASA's Infrared Processing and Analysis Center (IPAC) Infrared Science Archive (IRSA). New data releases will be provided through IPAC IRSA with any future improvements in the reduction.Comment: Accepted for publication in Astrophysical Journal Supplemen