Distinguishing niche and neutral processes: issues in variation partitioning statistical methods and further perspectives

Variance partitioning methods, which are built upon multivariate statistics, have been widely applied in different taxa and habitats in community ecology. Here, I performed a literature review on the development and application of the methods, and then discussed the limitation of available methods and the difficulties involved in sampling schemes. The central goal of the work is then to propose some potential practical methods that might help to overcome different issues of traditional least-square-based regression modeling. A variety of regression models has been considered for comparison. In initial simulations, I identified that generalized additive model (GAM) has the highest accuracy to predict variation components. Therefore, I argued that other advanced regression techniques, including the GAM and related models, could be utilized in variation partitioning for better quantifying the aggregation scenarios of species distribution.Comment: 19 pages; 4 figure

Aggregating the response in time series regression models, applied to weather-related cardiovascular mortality.

In environmental epidemiology studies, health response data (e.g. hospitalization or mortality) are often noisy because of hospital organization and other social factors. The noise in the data can hide the true signal related to the exposure. The signal can be unveiled by performing a temporal aggregation on health data and then using it as the response in regression analysis. From aggregated series, a general methodology is introduced to account for the particularities of an aggregated response in a regression setting. This methodology can be used with usually applied regression models in weather-related health studies, such as generalized additive models (GAM) and distributed lag nonlinear models (DLNM). In particular, the residuals are modelled using an autoregressive-moving average (ARMA) model to account for the temporal dependence. The proposed methodology is illustrated by modelling the influence of temperature on cardiovascular mortality in Canada. A comparison with classical DLNMs is provided and several aggregation methods are compared. Results show that there is an increase in the fit quality when the response is aggregated, and that the estimated relationship focuses more on the outcome over several days than the classical DLNM. More precisely, among various investigated aggregation schemes, it was found that an aggregation with an asymmetric Epanechnikov kernel is more suited for studying the temperature-mortality relationship

Robust modelling framework for short-term forecasting of global horizontal irradiance

The increasing demand for electricity and the need for clean energy sources have increased solar energy use. Accurate forecasts of solar energy are required for easy management of the grid. This paper compares the accuracy of two Gaussian Process Regression (GPR) models combined with Additive Quantile Regression (AQR) and Bayesian Structural Time Series (BSTS) models in the 2-day ahead forecasting of global horizontal irradiance using data from the University of Pretoria from July 2020 to August 2021. Four methods were adopted for variable selection, Lasso, ElasticNet, Boruta, and GBR (Gradient Boosting Regression). The variables selected using GBR were used because they produced the lowest MAE (Minimum Absolute Errors) value. A comparison of seven models GPR (Gaussian Process Regression), Two-layer DGPR (Two-layer Deep Gaussian Process Regression), bstslong (Bayesian Structural Time Series long), AQRA (Additive Quantile Regression Averaging), QRNN(Quantile Regression Neural Network), PLAQR(Partial Linear additive Quantile Regression), and Opera(Online Prediction by ExpRt Aggregation) was made. The evaluation metrics used to select the best model were the MAE (Mean Absolute Error) and RMSE (Root Mean Square Error). Further evaluations were done using proper scoring rules and Murphy diagrams. The best individual model was found to be the GPR. The best forecast combination was AQRA ((AQR Averaging) based on MAE. However, based on RMSE, GPNN was the best forecast combination method. Companies such as Eskom could use the methods adopted in this study to control and manage the power grid. The results will promote economic development and sustainability of energy resources.Comment: 25 pages, 12 figures and 7 table

Scalable aggregation predictive analytics: a query-driven machine learning approach

We introduce a predictive modeling solution that provides high quality predictive analytics over aggregation queries in Big Data environments. Our predictive methodology is generally applicable in environments in which large-scale data owners may or may not restrict access to their data and allow only aggregation operators like COUNT to be executed over their data. In this context, our methodology is based on historical queries and their answers to accurately predict ad-hoc queries’ answers. We focus on the widely used set-cardinality, i.e., COUNT, aggregation query, as COUNT is a fundamental operator for both internal data system optimizations and for aggregation-oriented data exploration and predictive analytics. We contribute a novel, query-driven Machine Learning (ML) model whose goals are to: (i) learn the query-answer space from past issued queries, (ii) associate the query space with local linear regression & associative function estimators, (iii) define query similarity, and (iv) predict the cardinality of the answer set of unseen incoming queries, referred to the Set Cardinality Prediction (SCP) problem. Our ML model incorporates incremental ML algorithms for ensuring high quality prediction results. The significance of contribution lies in that it (i) is the only query-driven solution applicable over general Big Data environments, which include restricted-access data, (ii) offers incremental learning adjusted for arriving ad-hoc queries, which is well suited for query-driven data exploration, and (iii) offers a performance (in terms of scalability, SCP accuracy, processing time, and memory requirements) that is superior to data-centric approaches. We provide a comprehensive performance evaluation of our model evaluating its sensitivity, scalability and efficiency for quality predictive analytics. In addition, we report on the development and incorporation of our ML model in Spark showing its superior performance compared to the Spark’s COUNT method

Deep Neural Networks for No-Reference and Full-Reference Image Quality Assessment

We present a deep neural network-based approach to image quality assessment (IQA). The network is trained end-to-end and comprises ten convolutional layers and five pooling layers for feature extraction, and two fully connected layers for regression, which makes it significantly deeper than related IQA models. Unique features of the proposed architecture are that: 1) with slight adaptations it can be used in a no-reference (NR) as well as in a full-reference (FR) IQA setting and 2) it allows for joint learning of local quality and local weights, i.e., relative importance of local quality to the global quality estimate, in an unified framework. Our approach is purely data-driven and does not rely on hand-crafted features or other types of prior domain knowledge about the human visual system or image statistics. We evaluate the proposed approach on the LIVE, CISQ, and TID2013 databases as well as the LIVE In the wild image quality challenge database and show superior performance to state-of-the-art NR and FR IQA methods. Finally, cross-database evaluation shows a high ability to generalize between different databases, indicating a high robustness of the learned features

Local Short Term Electricity Load Forecasting: Automatic Approaches

Short-Term Load Forecasting (STLF) is a fundamental component in the efficient management of power systems, which has been studied intensively over the past 50 years. The emerging development of smart grid technologies is posing new challenges as well as opportunities to STLF. Load data, collected at higher geographical granularity and frequency through thousands of smart meters, allows us to build a more accurate local load forecasting model, which is essential for local optimization of power load through demand side management. With this paper, we show how several existing approaches for STLF are not applicable on local load forecasting, either because of long training time, unstable optimization process, or sensitivity to hyper-parameters. Accordingly, we select five models suitable for local STFL, which can be trained on different time-series with limited intervention from the user. The experiment, which consists of 40 time-series collected at different locations and aggregation levels, revealed that yearly pattern and temperature information are only useful for high aggregation level STLF. On local STLF task, the modified version of double seasonal Holt-Winter proposed in this paper performs relatively well with only 3 months of training data, compared to more complex methods