Topology of spaces of knots in dimension 3

This paper is a computation of the homotopy type of K, the space of long knots in R^3, the same space of knots studied by Vassiliev via singularity theory. Each component of K corresponds to an isotopy class of long knot, and we `enumerate' the components via the companionship trees associated to the knot. The knots with the simplest companionship trees are: the unknot, torus knots, and hyperbolic knots. The homotopy-type of these components of K were computed by Hatcher. In the case the companionship tree has height, we give a fibre-bundle description of those components of K, recursively, in terms of the homotopy types of `simpler' components of K, in the sense that they correspond to knots with shorter companionship trees. The primary case studied in this paper is the case of a knot which has a hyperbolic manifold contained in the JSJ-decomposition of its complement.Comment: 22 pages, 16 figure

Laminations and groups of homeomorphisms of the circle

If M is an atoroidal 3-manifold with a taut foliation, Thurston showed that pi_1(M) acts on a circle. Here, we show that some other classes of essential laminations also give rise to actions on circles. In particular, we show this for tight essential laminations with solid torus guts. We also show that pseudo-Anosov flows induce actions on circles. In all cases, these actions can be made into faithful ones, so pi_1(M) is isomorphic to a subgroup of Homeo(S^1). In addition, we show that the fundamental group of the Weeks manifold has no faithful action on S^1. As a corollary, the Weeks manifold does not admit a tight essential lamination, a pseudo-Anosov flow, or a taut foliation. Finally, we give a proof of Thurston's universal circle theorem for taut foliations based on a new, purely topological, proof of the Leaf Pocket Theorem.Comment: 50 pages, 12 figures. Ver 2: minor improvement

Diamond-based models for scientific visualization

Hierarchical spatial decompositions are a basic modeling tool in a variety of application domains including scientific visualization, finite element analysis and shape modeling and analysis. A popular class of such approaches is based on the regular simplex bisection operator, which bisects simplices (e.g. line segments, triangles, tetrahedra) along the midpoint of a predetermined edge. Regular simplex bisection produces adaptive simplicial meshes of high geometric quality, while simplifying the extraction of crack-free, or conforming, approximations to the original dataset. Efficient multiresolution representations for such models have been achieved in 2D and 3D by clustering sets of simplices sharing the same bisection edge into structures called diamonds. In this thesis, we introduce several diamond-based approaches for scientific visualization. We first formalize the notion of diamonds in arbitrary dimensions in terms of two related simplicial decompositions of hypercubes. This enables us to enumerate the vertices, simplices, parents and children of a diamond. In particular, we identify the number of simplices involved in conforming updates to be factorial in the dimension and group these into a linear number of subclusters of simplices that are generated simultaneously. The latter form the basis for a compact pointerless representation for conforming meshes generated by regular simplex bisection and for efficiently navigating the topological connectivity of these meshes. Secondly, we introduce the supercube as a high-level primitive on such nested meshes based on the atomic units within the underlying triangulation grid. We propose the use of supercubes to associate information with coherent subsets of the full hierarchy and demonstrate the effectiveness of such a representation for modeling multiresolution terrain and volumetric datasets. Next, we introduce Isodiamond Hierarchies, a general framework for spatial access structures on a hierarchy of diamonds that exploits the implicit hierarchical and geometric relationships of the diamond model. We use an isodiamond hierarchy to encode irregular updates to a multiresolution isosurface or interval volume in terms of regular updates to diamonds. Finally, we consider nested hypercubic meshes, such as quadtrees, octrees and their higher dimensional analogues, through the lens of diamond hierarchies. This allows us to determine the relationships involved in generating balanced hypercubic meshes and to propose a compact pointerless representation of such meshes. We also provide a local diamond-based triangulation algorithm to generate high-quality conforming simplicial meshes

The Hopf algebra of diagonal rectangulations

We define and study a combinatorial Hopf algebra dRec with basis elements indexed by diagonal rectangulations of a square. This Hopf algebra provides an intrinsic combinatorial realization of the Hopf algebra tBax of twisted Baxter permutations, which previously had only been described extrinsically as a sub Hopf algebra of the Malvenuto-Reutenauer Hopf algebra of permutations. We describe the natural lattice structure on diagonal rectangulations, analogous to the Tamari lattice on triangulations, and observe that diagonal rectangulations index the vertices of a polytope analogous to the associahedron. We give an explicit bijection between twisted Baxter permutations and the better-known Baxter permutations, and describe the resulting Hopf algebra structure on Baxter permutations.Comment: Very minor changes from version 1, in response to comments by referees. This is the final version, to appear in JCTA. 43 pages, 17 figure

In Search of Effectful Dependent Types

Real world programming languages crucially depend on the availability of computational effects to achieve programming convenience and expressive power as well as program efficiency. Logical frameworks rely on predicates, or dependent types, to express detailed logical properties about entities. According to the Curry-Howard correspondence, programming languages and logical frameworks should be very closely related. However, a language that has both good support for real programming and serious proving is still missing from the programming languages zoo. We believe this is due to a fundamental lack of understanding of how dependent types should interact with computational effects. In this thesis, we make a contribution towards such an understanding, with a focus on semantic methods.Comment: PhD thesis, Version submitted to Exam School