Batch kernel SOM and related Laplacian methods for social network analysis

Large graphs are natural mathematical models for describing the structure of the data in a wide variety of fields, such as web mining, social networks, information retrieval, biological networks, etc. For all these applications, automatic tools are required to get a synthetic view of the graph and to reach a good understanding of the underlying problem. In particular, discovering groups of tightly connected vertices and understanding the relations between those groups is very important in practice. This paper shows how a kernel version of the batch Self Organizing Map can be used to achieve these goals via kernels derived from the Laplacian matrix of the graph, especially when it is used in conjunction with more classical methods based on the spectral analysis of the graph. The proposed method is used to explore the structure of a medieval social network modeled through a weighted graph that has been directly built from a large corpus of agrarian contracts

Clustering and Community Detection with Imbalanced Clusters

Spectral clustering methods which are frequently used in clustering and community detection applications are sensitive to the specific graph constructions particularly when imbalanced clusters are present. We show that ratio cut (RCut) or normalized cut (NCut) objectives are not tailored to imbalanced cluster sizes since they tend to emphasize cut sizes over cut values. We propose a graph partitioning problem that seeks minimum cut partitions under minimum size constraints on partitions to deal with imbalanced cluster sizes. Our approach parameterizes a family of graphs by adaptively modulating node degrees on a fixed node set, yielding a set of parameter dependent cuts reflecting varying levels of imbalance. The solution to our problem is then obtained by optimizing over these parameters. We present rigorous limit cut analysis results to justify our approach and demonstrate the superiority of our method through experiments on synthetic and real datasets for data clustering, semi-supervised learning and community detection.Comment: Extended version of arXiv:1309.2303 with new applications. Accepted to IEEE TSIP

Low-Diameter Clusters in Network Analysis

In this dissertation, we introduce several novel tools for cluster-based analysis of complex systems and design solution approaches to solve the corresponding optimization problems. Cluster-based analysis is a subfield of network analysis which utilizes a graph representation of a system to yield meaningful insight into the system structure and functions. Clusters with low diameter are commonly used to characterize cohesive groups in applications for which easy reachability between group members is of high importance. Low-diameter clusters can be mathematically formalized using a clique and an s-club (with relatively small values of s), two concepts from graph theory. A clique is a subset of vertices adjacent to each other and an s-club is a subset of vertices inducing a subgraph with a diameter of at most s. A clique is actually a special case of an s-club with s = 1, hence, having the shortest possible diameter. Two topics of this dissertation focus on graphs prone to uncertainty and disruptions, and introduce several extensions of low-diameter models. First, we introduce a robust clique model in graphs where edges may fail with a certain probability and robustness is enforced using appropriate risk measures. With regard to its ability to capture underlying system uncertainties, finding the largest robust clique is a better alternative to the problem of finding the largest clique. Moreover, it is also a hard combinatorial optimization problem, requiring some effective solution techniques. To this aim, we design several heuristic approaches for detection of large robust cliques and compare their performance. Next, we consider graphs for which uncertainty is not explicitly defined, studying connectivity properties of 2-clubs. We notice that a 2-club can be very vulnerable to disruptions, so we enhance it by reinforcing additional requirements on connectivity and introduce a biconnected 2-club concept. Additionally, we look at the weak 2-club counterpart which we call a fragile 2-club (defined as a 2-club that is not biconnected). The size of the largest biconnected 2-club in a graph can help measure overall system reachability and connectivity, whereas the largest fragile 2-club can identify vulnerable parts of the graph. We show that the problem of finding the largest fragile 2-club is polynomially solvable whereas the problem of finding the largest biconnected 2-club is NP-hard. Furthermore, for the former, we design a polynomial time algorithm and for the latter - combinatorial branch-and-bound and branch-and-cut algorithms. Lastly, we once again consider the s-club concept but shift our focus from finding the largest s-club in a graph to the problem of partitioning the graph into the smallest number of non-overlapping s-clubs. This problem cannot only be applied to derive communities in the graph, but also to reduce the size of the graph and derive its hierarchical structure. The problem of finding the minimum s-club partitioning is a hard combinatorial optimization problem with proven complexity results and is also very hard to solve in practice. We design a branch-and-bound combinatorial optimization algorithm and test it on the problem of minimum 2-club partitioning