233,194 research outputs found

    Copepods controlling bacterial communities on fecal pellets

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    The traditional view of the marine food web depicts bacteria and copepods (mainly planktonic species) as separate units, indirectly connected via nutrient cycling and trophic cascade processes. In contrast, several recent studies have demonstrated that zooplankton and bacteria directly interact, physically, e.g. bacteria attached to zooplankton bodies and biologically, e.g. zooplankton feeding supports bacterial growth through their excretions. Copepods produce large numbers of fecal pellets in the marine environment. Almost immediately after egestion, pellets host extensive bacterial communities. Low amounts of fecal material in sediment traps indicate most part of fecal pellet production is retained in the water column as a result of high microbial degradation rates and planktonic copepods reworking the fecal pellets. First observations on the re-use of feces by benthic copepods points out that these crustaceans profit in a yet unknown way from fecal pellet bacteria. Recently it was illustrated that the benthic species Paramphiascella fulvofasciata increases its fecal pellet production according to its food source. Presumably the bacteria associated with fecal pellets create a trophic upgrading of the fecal material. A detailed characterization of these bacteria is crucial to understand the trophic pathways in the lower marine food web. Culture-independent molecular techniques (e.g. DGGE) showed the specificity of these communities. Shifts in the bacterial communities are caused by age, original food source (e.g. diatoms) and producer of the fecal pellet. Moreover, an additional grazing experiment illustrated the importance of the freshness of the initial food source for grazing preferences but also for the bacterial communities on the fecal pellets. Food of low quality was compensated by more diverse bacterial communities that were available for additional grazing. These results illustrated the importance of fecal bacteria in the transformation of organic matter and energy transfer in marine sediments

    Prevalence of Enteropathogens in Dogs Attending 3 Regional Dog Parks in Northern California.

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    BackgroundThe prevalence and risk factors for infection with enteropathogens in dogs frequenting dog parks have been poorly documented, and infected dogs can pose a potential zoonotic risk for owners.Hypothesis/objectivesTo determine the prevalence and risk factors of infection with enteropathogens and zoonotic Giardia strains in dogs attending dog parks in Northern California and to compare results of fecal flotation procedures performed at a commercial and university parasitology laboratory.AnimalsThree-hundred dogs attending 3 regional dog parks in Northern California.MethodsProspective study. Fresh fecal specimens were collected from all dogs, scored for consistency, and owners completed a questionnaire. Specimens were analyzed by fecal centrifugation flotation, DFA, and PCR for detection of 11 enteropathogens. Giardia genotyping was performed for assemblage determination.ResultsEnteropathogens were detected in 114/300 dogs (38%), of which 62 (54%) did not have diarrhea. Frequency of dog park attendance correlated significantly with fecal consistency (P = .0039), but did not correlate with enteropathogen detection. Twenty-seven dogs (9%) were infected with Giardia, and genotyping revealed nonzoonotic assemblages C and D. The frequency of Giardia detection on fecal flotation was significantly lower at the commercial laboratory versus the university laboratory (P = .013), and PCR for Giardia was negative in 11/27 dogs (41%) that were positive on fecal flotation or DFA.Conclusions and clinical importanceEnteropathogens were commonly detected in dogs frequenting dog parks, and infection with Giardia correlated with fecal consistency. PCR detection of Giardia had limited diagnostic utility, and detection of Giardia cysts by microscopic technique can vary among laboratories

    Antibiotic resistance from food

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    Antimicrobial resistant Escherichia coli are found in most fecal samples from the normal population. The present study tested the hypothesis that antibiotic-resistant bacteria come from contaminated food. Six healthy volunteers ate a sterile diet for 3 weeks after a control period. The fecal incidence of resistance to ampicillin, tetracycline, and streptomycin in lactose-fermenting enteric bacilli was determined daily. During the control period, the populations of fecal resistant lac+ enteric bacilli varied with time, periodically reaching a high level of 108 per gram. After the start of the sterile diet, the fecal concentration of resistant bacteria dropped. Three days later, no resistant strain could be detected in the feces of three volunteers, whereas in those of the other three, some could be detected sporadically. The sterile diet reduced the number of resistant bacilli in all volunteers (p<0.001). Thus, most fecal resistant lac+ enteric bacilli come from contaminated food: transient strains enter the intestines with food and are excreted in feces

    Sewage analyses for antibiotic resistance within fecal E. coli isolates : a thesis presented in partial fulfilment of the requirements for the degree of Master of Science in Microbiology at Massey University

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    This investigation was undertaken to explore possible surveillance methods which might be applied in surveys of the incidence of acquired antibiotic resistance in fecal bacteria being shed by an urban population; the Palmerston North City sewage system served as a sampling device. Fecal E. coli was used as an indicator organism by virtue of its inherent sensitivity to several relevant antibiotics and, further, by virtue of the fact that antibiotic resistance in this microorganism can, in general, be attributed to plasmids coding for the resistance character(s) In the course of these exploratory studies it was observed that fecal E. coli accounted for 6 to 14% of the total coliforms present in sewage samples; the number of fecal E. coli in any given sewage sample was affected by the flow rate of the sewage and the rainfall

    Experimental In-Field Transfer and Survival of Escherichia coli from Animal Feces to Romaine Lettuce in Salinas Valley, California.

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    This randomized controlled trial characterized the transfer of E. coli from animal feces and/or furrow water onto adjacent heads of lettuce during foliar irrigation, and the subsequent survival of bacteria on the adaxial surface of lettuce leaves. Two experiments were conducted in Salinas Valley, California: (1) to quantify the transfer of indicator E. coli from chicken and rabbit fecal deposits placed in furrows to surrounding lettuce heads on raised beds, and (2) to quantify the survival of inoculated E. coli on Romaine lettuce over 10 days. E. coli was recovered from 97% (174/180) of lettuce heads to a maximal distance of 162.56 cm (5.33 ft) from feces. Distance from sprinklers to feces, cumulative foliar irrigation, and lettuce being located downwind of the fecal deposit were positively associated, while distance from fecal deposit to lettuce was negatively associated with E. coli transference. E. coli exhibited decimal reduction times of 2.2 and 2.5 days when applied on the adaxial surface of leaves within a chicken or rabbit fecal slurry, respectively. Foliar irrigation can transfer E. coli from feces located in a furrow onto adjacent heads of lettuce, likely due to the kinetic energy of irrigation droplets impacting the fecal surface and/or impacting furrow water contaminated with feces, with the magnitude of E. coli enumerated per head of lettuce influenced by the distance between lettuce and the fecal deposit, cumulative application of foliar irrigation, wind aspect of lettuce relative to feces, and time since final irrigation. Extending the time period between foliar irrigation and harvest, along with a 152.4 cm (5 ft) no-harvest buffer zone when animal fecal material is present, may substantially reduce the level of bacterial contamination on harvested lettuce

    Measurement of Fecal Testosterone Metabolites in Mice: Replacement of Invasive Techniques

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    Testosterone is the main reproductive hormone in male vertebrates and conventional methods to measure testosterone rely on invasive blood sampling procedures. Here, we aimed to establish a non-invasive alternative by assessing testosterone metabolites (TMs) in fecal and urinary samples in mice. We performed a radiometabolism study to determine the effects of daytime and sex on the metabolism and excretion pattern of radiolabeled TMs. We performed physiological and biological validations of the applied EIA to measure TMs and assessed diurnal fluctuations in TM excretions in male and female mice and across strains. We found that males excreted significantly more radiolabeled TMs via the feces (59%) compared to females (49.5%). TM excretion patterns differed significantly between urinary and fecal samples and were affected by the daytime of ³H-testosterone injection. Overall, TM excretion occurred faster in urinary than fecal samples. Peak excretion of fecal TMs occurred after 8 h when animals received the 3H-testosterone in the morning, or after 4 h when they received the 3H-testosterone injection in the evening. Daytime had no effect on the formed TMs; however, males and females formed different types of TMs. As expected, males showed higher fecal TM levels than females. Males also showed diurnal fluctuations in their TM levels but we found no differences in the TM levels of C57BL/6J and B6D2F1 hybrid males. Finally, we successfully validated our applied EIA (measuring 17β-hydroxyandrostane) by showing that hCG (human chorionic gonadotropin) administration increased TM levels, whereas castration reduced them. In conclusion, our EIA proved suitable for measuring fecal TMs in mice. Our non-invasive method to assess fecal TMs can be widely used in various research disciplines like animal behavior, reproduction, animal welfare, ecology, conservation, and biomedicine

    RNA Viral Community in Human Feces: Prevalence of Plant Pathogenic Viruses

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    The human gut is known to be a reservoir of a wide variety of microbes, including viruses. Many RNA viruses are known to be associated with gastroenteritis; however, the enteric RNA viral community present in healthy humans has not been described. Here, we present a comparative metagenomic analysis of the RNA viruses found in three fecal samples from two healthy human individuals. For this study, uncultured viruses were concentrated by tangential flow filtration, and viral RNA was extracted and cloned into shotgun viral cDNA libraries for sequencing analysis. The vast majority of the 36,769 viral sequences obtained were similar to plant pathogenic RNA viruses. The most abundant fecal virus in this study was pepper mild mottle virus (PMMV), which was found in high concentrations—up to 10(9) virions per gram of dry weight fecal matter. PMMV was also detected in 12 (66.7%) of 18 fecal samples collected from healthy individuals on two continents, indicating that this plant virus is prevalent in the human population. A number of pepper-based foods tested positive for PMMV, suggesting dietary origins for this virus. Intriguingly, the fecal PMMV was infectious to host plants, suggesting that humans might act as a vehicle for the dissemination of certain plant viruses

    Valve for waste collection and storage

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    A method and valve apparatus for collection of fecal matter designed to operate efficiently in a zero gravity environment is presented. The system comprises a waste collection area within a body having a seat opening. Low pressure within the waste collection area directs fecal matter away from the user's buttocks and prevents the escape of undersirable gases. The user actuates a piston covered with an absorbent pad that sweeps through the waste collection area to collect the fecal matter, scrub the waste collection area, press the waste against an end of the waste collection area and retracts, leaving the used pad. Multiple pads are provided on the piston to accommodate multiple uses of the system. Also a valve allows air to be drawn through the body, so the valve will not be plugged with fecal matter. A sheet feeder feeds fresh sheets of absorbent pads to a face of the piston with each actuation
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