22 research outputs found
DataSheet_2_A novel signature of aging-related genes associated with lymphatic metastasis for survival prediction in patients with bladder cancer.xlsx
BackgroundThe predominant and most prevalent form of metastatic bladder cancer (BCa) is lymphatic metastasis, which is associated with a highly dismal prognosis for patients. Aging-related genes (ARGs) are believed to contribute significantly to tumor development. However, the effect of ARGs on lymphatic metastasis of BCa is unclear. This research sought to establish a prognosis model based on ARGs associated with lymphatic metastasis in BCa.MethodsWe downloaded BCa data from the TCGA and GEO databases and ARGs from the Aging Atlas database. The least absolute shrinkage and selection operator (LASSO) approach was applied to obtain the characteristic ARGs of risk signature in the TCGA cohort. Verification was done using the GSE13507 dataset. The R package ‘ConsensusClusterPlus’ was employed to identify the molecular subtypes based on the characteristic ARGs. Protein-Protein interaction network, MCODE analysis, enrichment analysis (KEGG, GO, GSEA), and immune infiltration analysis were performed to investigate underlying mechanisms. EdU, migration and invasion assays, wound healing assays, immunofluorescence staining, and quantitative polymerase chain reaction were conducted to evaluate the impact of ELN on the proliferative, migratory, and invasive capacities of BCa cells.ResultsWe identified 20 differently expressed ARGs. A four ARGs risk signature (EFEMP1, UCHL1, TP63, ELN) was constructed in the TCGA cohort. The high-risk group (category) recorded a reduced overall survival (OS) rate relative to the low-risk category (hazard ratio, 2.15; P ConclusionWe constructed a four-ARG risk signature and identified two aging molecular subtypes. This signature could serve as an effective survival predictor for patients with BCa.</p
DataSheet_3_A novel signature of aging-related genes associated with lymphatic metastasis for survival prediction in patients with bladder cancer.xls
BackgroundThe predominant and most prevalent form of metastatic bladder cancer (BCa) is lymphatic metastasis, which is associated with a highly dismal prognosis for patients. Aging-related genes (ARGs) are believed to contribute significantly to tumor development. However, the effect of ARGs on lymphatic metastasis of BCa is unclear. This research sought to establish a prognosis model based on ARGs associated with lymphatic metastasis in BCa.MethodsWe downloaded BCa data from the TCGA and GEO databases and ARGs from the Aging Atlas database. The least absolute shrinkage and selection operator (LASSO) approach was applied to obtain the characteristic ARGs of risk signature in the TCGA cohort. Verification was done using the GSE13507 dataset. The R package ‘ConsensusClusterPlus’ was employed to identify the molecular subtypes based on the characteristic ARGs. Protein-Protein interaction network, MCODE analysis, enrichment analysis (KEGG, GO, GSEA), and immune infiltration analysis were performed to investigate underlying mechanisms. EdU, migration and invasion assays, wound healing assays, immunofluorescence staining, and quantitative polymerase chain reaction were conducted to evaluate the impact of ELN on the proliferative, migratory, and invasive capacities of BCa cells.ResultsWe identified 20 differently expressed ARGs. A four ARGs risk signature (EFEMP1, UCHL1, TP63, ELN) was constructed in the TCGA cohort. The high-risk group (category) recorded a reduced overall survival (OS) rate relative to the low-risk category (hazard ratio, 2.15; P ConclusionWe constructed a four-ARG risk signature and identified two aging molecular subtypes. This signature could serve as an effective survival predictor for patients with BCa.</p
DataSheet_1_A novel signature of aging-related genes associated with lymphatic metastasis for survival prediction in patients with bladder cancer.xlsx
BackgroundThe predominant and most prevalent form of metastatic bladder cancer (BCa) is lymphatic metastasis, which is associated with a highly dismal prognosis for patients. Aging-related genes (ARGs) are believed to contribute significantly to tumor development. However, the effect of ARGs on lymphatic metastasis of BCa is unclear. This research sought to establish a prognosis model based on ARGs associated with lymphatic metastasis in BCa.MethodsWe downloaded BCa data from the TCGA and GEO databases and ARGs from the Aging Atlas database. The least absolute shrinkage and selection operator (LASSO) approach was applied to obtain the characteristic ARGs of risk signature in the TCGA cohort. Verification was done using the GSE13507 dataset. The R package ‘ConsensusClusterPlus’ was employed to identify the molecular subtypes based on the characteristic ARGs. Protein-Protein interaction network, MCODE analysis, enrichment analysis (KEGG, GO, GSEA), and immune infiltration analysis were performed to investigate underlying mechanisms. EdU, migration and invasion assays, wound healing assays, immunofluorescence staining, and quantitative polymerase chain reaction were conducted to evaluate the impact of ELN on the proliferative, migratory, and invasive capacities of BCa cells.ResultsWe identified 20 differently expressed ARGs. A four ARGs risk signature (EFEMP1, UCHL1, TP63, ELN) was constructed in the TCGA cohort. The high-risk group (category) recorded a reduced overall survival (OS) rate relative to the low-risk category (hazard ratio, 2.15; P ConclusionWe constructed a four-ARG risk signature and identified two aging molecular subtypes. This signature could serve as an effective survival predictor for patients with BCa.</p
Table_1_A novel signature of aging-related genes associated with lymphatic metastasis for survival prediction in patients with bladder cancer.docx
BackgroundThe predominant and most prevalent form of metastatic bladder cancer (BCa) is lymphatic metastasis, which is associated with a highly dismal prognosis for patients. Aging-related genes (ARGs) are believed to contribute significantly to tumor development. However, the effect of ARGs on lymphatic metastasis of BCa is unclear. This research sought to establish a prognosis model based on ARGs associated with lymphatic metastasis in BCa.MethodsWe downloaded BCa data from the TCGA and GEO databases and ARGs from the Aging Atlas database. The least absolute shrinkage and selection operator (LASSO) approach was applied to obtain the characteristic ARGs of risk signature in the TCGA cohort. Verification was done using the GSE13507 dataset. The R package ‘ConsensusClusterPlus’ was employed to identify the molecular subtypes based on the characteristic ARGs. Protein-Protein interaction network, MCODE analysis, enrichment analysis (KEGG, GO, GSEA), and immune infiltration analysis were performed to investigate underlying mechanisms. EdU, migration and invasion assays, wound healing assays, immunofluorescence staining, and quantitative polymerase chain reaction were conducted to evaluate the impact of ELN on the proliferative, migratory, and invasive capacities of BCa cells.ResultsWe identified 20 differently expressed ARGs. A four ARGs risk signature (EFEMP1, UCHL1, TP63, ELN) was constructed in the TCGA cohort. The high-risk group (category) recorded a reduced overall survival (OS) rate relative to the low-risk category (hazard ratio, 2.15; P ConclusionWe constructed a four-ARG risk signature and identified two aging molecular subtypes. This signature could serve as an effective survival predictor for patients with BCa.</p
Postsynthesis and Effective Baeyer–Villiger Oxidation Properties of Hierarchical FAU-type Stannosilicate
Sn–Y zeolite, with hierarchical
pore systems and extremely
low Al content, was successfully prepared via a convenient postsynthetic
route which involves proper predealumination and subsequent (NH<sub>4</sub>)<sub>2</sub>SnCl<sub>6</sub> treatment under mild aqueous
condition. The Sn ions were incorporated into the framework of properly
dealuminated Y zeolite through reacting with the defect sites generated
in the industrial steaming treatment, the first-step acid treatment,
and the second Sn incorporation process under acidic conditions. The
acidic medium achieved by adding HCl in the Sn incorporation process
affected not only the amount of incorporated Sn and residual Al but
also the coordination state of inserted Sn ions. Compared with hydrothermally
synthesized Sn-Beta, postsynthesized Sn–Y zeolite exhibited
outstanding catalytic performances in the Baeyer–Villiger oxidation
reactions of ketones especially when bulky <i>tert</i>-butyl
hydroperoxide was employed as the oxidant due to an open pore structure
of 3-dimensional 12-membered ring (12-MR) channels of FAU topology
as well as the dealumination-derived intracrystal mesoporosity. Moreover,
alkali metal ions modification was shown to be an effective approach
for enhancing the selectivity of lactones
Odd−Even Effect in Free Radical Polymerization of Optically Active 2,5-Bis[(4‘-alkoxycarbonyl)- phenyl]styrene
Odd−Even Effect in Free Radical Polymerization of
Optically Active 2,5-Bis[(4‘-alkoxycarbonyl)-
phenyl]styren
Sensitivity analysis after each study was excluded by turns.
Sensitivity analysis after each study was excluded by turns.</p
Summary of studies of the comparison of the effect of pain relief of dorsal penile nerve block and lidocaine cream in circumcision.
Summary of studies of the comparison of the effect of pain relief of dorsal penile nerve block and lidocaine cream in circumcision.</p
Anthocyanin Accumulation and Molecular Analysis of Correlated Genes in Purple Kohlrabi (Brassica oleracea var. <i>gongylodes</i> L.)
Kohlrabi (Brassica
oleracea var. <i>gongylodes</i> L.) is an
important dietary vegetable cultivated and consumed widely for the
round swollen stem. Purple kohlrabi shows abundant anthocyanin accumulation
in the leaf and swollen stem. Here, different kinds of anthocyanins
were separated and identified from the purple kohlrabi cultivar (Kolibri)
by high-performance liquid chromatography–electrospray ionization
tandem mass spectrometry. In order to study the molecular mechanism
of anthocyanin biosynthesis in purple kohlrabi, the expression of
anthocyanin biosynthetic genes and regulatory genes in purple kohlrabi
and a green cultivar (Winner) was examined by quantitative PCR. In
comparison with the colorless parts in the two cultivars, most of
the anthocyanin biosynthetic genes and two transcription factors were
drastically upregulated in the purple tissues. To study the effects
of light shed on the anthocyanin accumulation of kohlrabi, total anthocyanin
contents and transcripts of associated genes were analyzed in sprouts
of both cultivars grown under light and dark conditions
Risk of bias graph and risk of bias summary.
Risk of bias graph and risk of bias summary.</p
