8 research outputs found
Gene ontology (GO) annotations of the annotated unigenes.
<p>12,503 unigenes were assigned to three GO categories containing 52 functional subcategories.</p
Venn diagram showing the comparison among <i>P. olivaceus</i> transcriptomic sequences with the known sequences from <i>D. rerio</i> and <i>P. olivaceus</i> EST deposited in the NCBI database.
<p>Venn diagram showing the comparison among <i>P. olivaceus</i> transcriptomic sequences with the known sequences from <i>D. rerio</i> and <i>P. olivaceus</i> EST deposited in the NCBI database.</p
Cluster of Orthologous Groups (COG) annotations of annotated unigenes.
<p>19,547 unigenes were classified into 26 COG categories.</p
Length distribution of the assembled (blue) and the annotated unigenes (red) of <i>P. olivaceus</i>.
<p>Length distribution of the assembled (blue) and the annotated unigenes (red) of <i>P. olivaceus</i>.</p
Summary statistics of <i>P. olivaceus</i> transcriptome sequencing and assembly.
<p>Summary statistics of <i>P. olivaceus</i> transcriptome sequencing and assembly.</p
Immune pathways annotated in the <i>P.olivaceus</i> spleen transcriptome.
<p>Immune pathways annotated in the <i>P.olivaceus</i> spleen transcriptome.</p
Quantitative Real-time PCR (qRT—PCR) validation of the expressed genes in transcriptome sequencing.
<p>IRAK4: interleukin-1 receptor-associated kinase 4; IRF7: interferon regulatory factor 7; INFAR: interferon receptor 1; NFKB1: nuclear factor NF-kappa-B p105 subunit; TRAF6: TNF receptor-associated factor 6; AKT: RAC serine/threonine-protein kinase; IRAK1: interleukin-1 receptor-associated kinase 1; F2: coagulation factorII; TNFA: tumor necrosis factor superfamily. Values are presented as means ± standard deviation(n = 5)and the error bars indicate the standard deviation.</p