112 research outputs found
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<p>Scale worms in the family Polynoidae are common inhabitants of both shallow-water and deep-sea ecosystems, but their diversity in the deep-sea remains poorly known. In the West Pacific, only 10 polynoid species have been described from deep-sea chemosynthetic ecosystems including hydrothermal vents and methane seeps. Here, we described two new species of polynoids based on specimens collected from hydrothermal vents in the Okinawa Trough. Levensteiniella undomarginata sp. nov. is distinguished from other congeners by having elytra with a wave-shaped edge, and that males possess two pairs of nephridial papillae. Branchinotogluma elytropapillata sp. nov. differs from other congeners by having papillae on the elytral edge, and by having a single pair of nephridial papillae and five pairs of C-shaped lamellae in males. Furthermore, we redescribed Lepidonotopodium okinawae (Sui and Li, 2017) and Branchinotogluma japonicus Miura and Hashimoto, 1991, because the original description of the former species did not cover males and that of the latter did not cover females. Sequencing of the cytochrome oxidase I (COI) gene in these four species confirmed the sexual dimorphism in vent polynoids for the first time, and provided reliable barcoding sequences for identifying these polychaetes.</p
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<p>Scale worms in the family Polynoidae are common inhabitants of both shallow-water and deep-sea ecosystems, but their diversity in the deep-sea remains poorly known. In the West Pacific, only 10 polynoid species have been described from deep-sea chemosynthetic ecosystems including hydrothermal vents and methane seeps. Here, we described two new species of polynoids based on specimens collected from hydrothermal vents in the Okinawa Trough. Levensteiniella undomarginata sp. nov. is distinguished from other congeners by having elytra with a wave-shaped edge, and that males possess two pairs of nephridial papillae. Branchinotogluma elytropapillata sp. nov. differs from other congeners by having papillae on the elytral edge, and by having a single pair of nephridial papillae and five pairs of C-shaped lamellae in males. Furthermore, we redescribed Lepidonotopodium okinawae (Sui and Li, 2017) and Branchinotogluma japonicus Miura and Hashimoto, 1991, because the original description of the former species did not cover males and that of the latter did not cover females. Sequencing of the cytochrome oxidase I (COI) gene in these four species confirmed the sexual dimorphism in vent polynoids for the first time, and provided reliable barcoding sequences for identifying these polychaetes.</p
Scale-Up Investigation of the Continuous Phase-Transfer-Catalyzed Hypochlorite Oxidation of Alcohols and Aldehydes
The use of bleach to oxidize alcohols
with the aid of a phase-transfer
catalyst (PTC) offers several benefits over traditional oxidants:
low material cost, mild reaction conditions, and no metallic waste.
Mass transport limitations often dictate overall reaction rates of
such PTC reactions, and continuous-flow reactors with superior mass
and heat transport performance are consequently used to enhance their
rates. Three PTC hypochlorite oxidation reactions are chosen to illustrate
scaling of PTC reactions from microfluidic to mesoscale systems [Corning
Low Flow Reactor (LFR) and Advanced Flow Reactor (AFR)]. The successful
scaling from microliters per hour in microreactors to intermediate
milliliters per minute without sacrificing mass transport performance
leads to significant increases in production rate and constitutes
an efficient flow reactor scaling approach. The production rate increases
up to 700 times in the scaling process from a spiral microreactor
to the LFR and then to the AFR
Specific Ion Effects on the Water Solubility of Macromolecules:  PNIPAM and the Hofmeister Series
Aqueous processes ranging from protein folding and enzyme turnover to colloidal ordering and
macromolecular precipitation are sensitive to the nature and concentration of the ions present in solution.
Herein, the effect of a series of sodium salts on the lower critical solution temperature (LCST) of poly(N-isopropylacrylamide), PNIPAM, was investigated with a temperature gradient microfluidic device under a
dark-field microscope. While the ability of a particular anion to lower the LCST generally followed the
Hofmeister series, analysis of solvent isotope effects and of the changes in LCST with ion concentration
and identity showed multiple mechanisms were at work. In solutions containing sufficient concentrations of
strongly hydrated anions, the phase transition of PNIPAM was directly correlated with the hydration entropy
of the anion. On the other hand, weakly hydrated anions were salted-out through surface tension effects
and displayed improved hydration by direct ion binding
DataSheet1_Morphology and rheology of composites of poly(styrene-co-2-vinyl pyridine) copolymers and phosphotungstic acid.pdf
Morphological and rheological properties are examined for poly(styrene-co-2-vinyl pyridine) (P(S-co-2VP)) copolymers upon introducing phosphotungstic acid, one kind of polyoxometalates (POMs). The phosphotungstic acid protonates the 2VP monomers, and the deprotonated phosphotungstic acid effectively crosslinks the protonated 2VP monomers, inducing phase segregation into the S-rich and 2VP-rich domains. Linear viscoelasticity (LVE) of the composite samples strongly relies on the continuity of the 2VP-rich domains and can be classified into the following three types. (1) For 2VP-rich sphere domains in the S-rich matrix, LVE is akin to the conventional elastomer characterized by a wide rubbery regime before the terminal relaxation. (2) For bicontinuous morphology, where both the 2VP-rich and S-rich domains are continuous, two glassy processes manifest in LVE, and the chain relaxation is controlled by the continuous ion dissociation in the less mobilized 2VP-rich domain. (3) When the 2VP-rich domain is the only continuous phase, only the glassy modulus of the 2VP-rich domain manifests in LVE, and the chain relaxation is activated by the continuous ionic dissociations in the matrix. Surprisingly, the relaxation time obtained for all three abovementioned morphologies can be reduced to a universal behavior once the average glass transition temperature of the 2VP-rich region and the number of effective stickers per chain have been properly normalized, indicating that these two parameters control the chain-dimensional dynamics.</p
Block Copolymer-Quantum Dot Micelles for Multienzyme Colocalization
To mimic the structure and functionality of multienzyme
complexes,
which are widely present in Nature, Pluronic-based micelles were designed
to colocalize multiple enzymes. To stabilize the micelles as well
as to enable characterization of single enzyme immobilization and
multienzyme colocalization by Förster resonance energy transfer
(FRET), quantum dots (QDs) were incorporated into the micelles to
form Pluronic-QD micelles using a novel microreactor. Model enzymes
glucose oxidase (GOX) and horseradish peroxidase (HRP) were respectively
labeled with fluorescent dyes. The results indicated that FRET occurred
between the QDs and dyes that labeled each type of enzyme in single
enzyme immobilization studies as well as between the dyes in colocalization
studies. These observations were consistent with increases in micelle
size after adsorption of dye-enzymes as verified by dynamic light
scattering. In addition, the activity of single enzymes was retained
after immobilization. An optimized colocalization process improved
the overall conversion rate by approximately 100% compared to equivalent
concentrations of free enzymes in solution. This study demonstrates
a versatile platform for multienzyme colocalization and an effective
strategy to characterize multienzyme immobilization and colocalization,
which can be applicable to many other multienzyme systems
The mitochondrial genome of the deep-sea glass sponge <i>Lophophysema eversa</i> (Porifera, Hexacinellida, Hyalonematidae)
<div><p></p><p>We reported a nearly complete mitochondrial genome (mitogenome) from the glass sponge <i>Lophophysema eversa</i>, the second mitogenome in the order Amphidiscosida and the ninth in the class Hexactinellida. It is 20,651 base pairs in length and contains 39 genes including 13 protein-coding genes, 2 ribosomal RNA subunit genes and 24 tRNA genes. The gene content and order of <i>L. eversa</i> are identical to those of <i>Tabachnickia</i> sp., the other species with a sequenced mitogenome in Amphidiscosida, except with two additional tRNAs and three tRNA translocations. The <i>cob</i> gene has a +1 translational frameshift. These results will contribute to a better understanding of the phylogeny of glass sponges.</p></div
Anion–Caffeine Interactions Studied by <sup>13</sup>C and <sup>1</sup>H NMR and ATR–FTIR Spectroscopy
This
work investigates the interactions of a series of 11 anions
with caffeine by utilizing <sup>13</sup>C and <sup>1</sup>H NMR and
attenuated total reflectance Fourier transform infrared (ATR–FTIR)
spectroscopy. The aim of this study is to elucidate the molecular
mechanisms of ion interactions with caffeine and to study how these
interactions affect caffeine aggregation in aqueous solution. The
chemical shift changes of caffeine <sup>13</sup>C and <sup>1</sup>H in the presence of salts provide a measure for anions’ salting–out/salting–in
abilities on individual carbon and hydrogen atoms in caffeine. The
relative influences of anions on the chemical shift of individual
atoms in the caffeine molecule are quantified. It is observed that
strongly hydrated anions are excluded from the carbons on the six-member
ring in caffeine and promote caffeine aggregation. On the other hand,
weakly hydrated anions decrease caffeine aggregation by accumulating
around the periphery of the caffeine molecule and binding to the ring
structure. The ATR–FTIR results demonstrate that strongly hydrated
anions desolvate the caffeine molecule and increase aggregation, while
weakly hydrated anions have the opposite effects and salt caffeine
into solution
Biphasic Catalytic Hydrogen Peroxide Oxidation of Alcohols in Flow: Scale-up and Extraction
We
report continuous solvent-free biphasic alcohol oxidation with
hydrogen peroxide and in-line separation of the tungsten polyoxometalate
catalyst and phase transfer catalyst from the product. Zinc-substituted
polyoxotungstate in combination with the selected phase transfer catalyst
drives the oxidation reaction to completion within a short residence
time (5–10 min) in a silicon Pyrex microreactor. This continuous
and small-scale reactor allows for fast optimization of reaction conditions
for each substrate and selection of the phase transfer catalyst. Scaling
of the production rate (up to 650 times) is achieved with a Corning
low flow reactor (LFR) and an advanced flow reactor (AFR). New scaled-up,
in-line membrane-based liquid–liquid extraction units at the
reactor outlet first separate the tungsten polyoxometalate catalyst
with the aqueous waste stream from the organic product stream. A three-stage
countercurrent liquid–liquid extraction then removes more
than 90% of the phase transfer catalyst from the desired organic effluent stream
while reducing the amount of extraction solvent required
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